RNA–Protein interactions for RNA: YML085C

TUB1, Transcript of Alpha-tubulin, yeastyeast

Gene TUB1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum, Peroxisome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TUB1YML085C CAN1P04817 590 aa6.88□□□□□ -1.31
TUB1YML085C PPH21P23594 369 aa6.88□□□□□ -1.31
TUB1YML085C PHO87P25360 923 aa6.88□□□□□ -1.31
TUB1YML085C NIP1P32497 812 aaKnown RBP6.88□□□□□ -1.31
TUB1YML085C SPT16P32558 1035 aaKnown RBP6.88□□□□□ -1.31
TUB1YML085C DOM34P33309 386 aa6.88□□□□□ -1.31
TUB1YML085C DEF1P35732 738 aaKnown RBP6.88□□□□□ -1.31
TUB1YML085C YHR033WP38690 423 aa6.88□□□□□ -1.31
TUB1YML085C SCS2P40075 244 aaKnown RBP6.88□□□□□ -1.31
TUB1YML085C COA1P40452 197 aa6.88□□□□□ -1.31
TUB1YML085C ZIM17P42844 174 aa6.88□□□□□ -1.31
TUB1YML085C GAT1P43574 510 aa6.88□□□□□ -1.31
TUB1YML085C YJR030CP47101 745 aa6.88□□□□□ -1.31
TUB1YML085C COS12P53053 380 aa6.88□□□□□ -1.31
TUB1YML085C MRM2P53123 320 aa6.88□□□□□ -1.31
TUB1YML085C YNR021WP53723 404 aaKnown RBP6.88□□□□□ -1.31
TUB1YML085C HDA3Q06623 655 aa6.88□□□□□ -1.31
TUB1YML085C IOC2Q12072 812 aa6.88□□□□□ -1.31
TUB1YML085C LEU9Q12166 604 aaKnown RBP6.88□□□□□ -1.31
TUB1YML085C NOT5Q12514 560 aaPredicted RBP6.88□□□□□ -1.31
TUB1YML085C PRT1P06103 763 aaKnown RBP6.87□□□□□ -1.31
TUB1YML085C RNA1P11745 407 aaKnown RBP6.87□□□□□ -1.31
TUB1YML085C CLN2P20438 545 aa6.87□□□□□ -1.31
TUB1YML085C SPS22P25380 463 aa6.87□□□□□ -1.31
TUB1YML085C TOA1P32773 286 aa6.87□□□□□ -1.31
TUB1YML085C CBF5P33322 483 aaKnown RBP RIP-Chip data6.87□□□□□ -1.31not detected
TUB1YML085C PRM2P40534 656 aa6.87□□□□□ -1.31
TUB1YML085C RLP7P40693 322 aaKnown RBP6.87□□□□□ -1.31
TUB1YML085C CCT7P42943 550 aaKnown RBP6.87□□□□□ -1.31
TUB1YML085C MTR3P48240 250 aaPredicted RBP6.87□□□□□ -1.31
TUB1YML085C AIF1P52923 378 aa6.87□□□□□ -1.31
TUB1YML085C HST3P53687 447 aa6.87□□□□□ -1.31
TUB1YML085C LGE1Q02796 332 aaKnown RBP6.87□□□□□ -1.31
TUB1YML085C YML096WQ04489 525 aa6.87□□□□□ -1.31
TUB1YML085C UAF30Q08747 228 aa6.87□□□□□ -1.31
TUB1YML085C TMA46Q12000 345 aaKnown RBP6.87□□□□□ -1.31
TUB1YML085C YPL247CQ12523 523 aa6.87□□□□□ -1.31
TUB1YML085C LAG2Q92325 660 aa6.87□□□□□ -1.31
TUB1YML085C YPT6Q99260 215 aa6.87□□□□□ -1.31
TUB1YML085C FMP27Q06179 2628 aa6.86□□□□□ -1.31
TUB1YML085C CDC21P06785 304 aa6.86□□□□□ -1.31
TUB1YML085C SPT3P06844 337 aa6.86□□□□□ -1.31
TUB1YML085C PRP6P19735 899 aaPredicted RBP6.86□□□□□ -1.31
TUB1YML085C YCK2P23292 546 aaKnown RBP6.86□□□□□ -1.31
TUB1YML085C HOG1P32485 435 aa6.86□□□□□ -1.31
TUB1YML085C PET309P32522 965 aaPredicted RBP6.86□□□□□ -1.31
TUB1YML085C NUP120P35729 1037 aa6.86□□□□□ -1.31
TUB1YML085C HES1P35843 434 aa6.86□□□□□ -1.31
TUB1YML085C VPS21P36017 210 aaKnown RBP6.86□□□□□ -1.31
TUB1YML085C CTP1P38152 299 aa6.86□□□□□ -1.31
TUB1YML085C BMT2P38278 337 aa6.86□□□□□ -1.31
TUB1YML085C INM1P38710 295 aa6.86□□□□□ -1.31
TUB1YML085C YHR112CP38716 378 aa6.86□□□□□ -1.31
TUB1YML085C VPS41P38959 992 aa6.86□□□□□ -1.31
TUB1YML085C GCD10P41814 478 aa6.86□□□□□ -1.31
TUB1YML085C MAD3P47074 515 aa6.86□□□□□ -1.31
TUB1YML085C SUN4P53616 420 aa6.86□□□□□ -1.31
TUB1YML085C IRC15Q02733 499 aa6.86□□□□□ -1.31
TUB1YML085C VPS16Q03308 798 aa6.86□□□□□ -1.31
TUB1YML085C ROT1Q03691 256 aa6.86□□□□□ -1.31
TUB1YML085C PHO5P00635 467 aa6.85□□□□□ -1.31
TUB1YML085C FUR1P18562 216 aaKnown RBP6.85□□□□□ -1.31
TUB1YML085C PTP1P25044 335 aa6.85□□□□□ -1.31
TUB1YML085C CDC13P32797 924 aaKnown RBP6.85□□□□□ -1.31
TUB1YML085C RRN3P36070 627 aa6.85□□□□□ -1.31
TUB1YML085C YCR087C-AP37263 153 aa6.85□□□□□ -1.31
TUB1YML085C VRP1P37370 817 aa6.85□□□□□ -1.31
TUB1YML085C ARA1P38115 344 aa6.85□□□□□ -1.31
TUB1YML085C SHU2P38957 223 aa6.85□□□□□ -1.31
TUB1YML085C FRT2P39734 528 aa6.85□□□□□ -1.31
TUB1YML085C SUM1P46676 1062 aa6.85□□□□□ -1.31
TUB1YML085C CUS2P53830 285 aaPredicted RBP6.85□□□□□ -1.31
TUB1YML085C PRO2P54885 456 aaKnown RBP6.85□□□□□ -1.31
TUB1YML085C DIN7Q12086 430 aa6.85□□□□□ -1.31
TUB1YML085C YPR011CQ12251 326 aa6.85□□□□□ -1.31
TUB1YML085C FUM1P08417 488 aaKnown RBP6.84□□□□□ -1.31
TUB1YML085C CMP2P14747 604 aa6.84□□□□□ -1.31
TUB1YML085C EXO70P19658 623 aa6.84□□□□□ -1.31
TUB1YML085C GBP2P25555 427 aaKnown RBP RIP-Chip data6.84□□□□□ -1.31not detected
TUB1YML085C SSH4P32343 579 aa6.84□□□□□ -1.31
TUB1YML085C MGM101P32787 269 aaKnown RBP6.84□□□□□ -1.31
TUB1YML085C SFC1P33303 322 aa6.84□□□□□ -1.31
TUB1YML085C EMC3P36039 253 aa6.84□□□□□ -1.31
TUB1YML085C HEK2P38199 381 aaKnown RBP RIP-Chip data6.84□□□□□ -1.31not detected
TUB1YML085C YBR071WP38243 211 aa6.84□□□□□ -1.31
TUB1YML085C ARN1P38731 627 aa6.84□□□□□ -1.31
TUB1YML085C SEC31P38968 1273 aaKnown RBP6.84□□□□□ -1.31
TUB1YML085C BEM4P39011 633 aa6.84□□□□□ -1.31
TUB1YML085C YEN1P40028 759 aa6.84□□□□□ -1.31
TUB1YML085C MGS1P40151 587 aa6.84□□□□□ -1.31
TUB1YML085C LTP1P40347 161 aa6.84□□□□□ -1.31
TUB1YML085C MNT3P40549 630 aa6.84□□□□□ -1.31
TUB1YML085C FKH2P41813 862 aa6.84□□□□□ -1.31
TUB1YML085C YJL049WP47048 450 aa6.84□□□□□ -1.31
TUB1YML085C NAS6P50086 228 aa6.84□□□□□ -1.31
TUB1YML085C YLR456WQ06199 204 aa6.84□□□□□ -1.31
TUB1YML085C ENT4Q07872 247 aa6.84□□□□□ -1.31
TUB1YML085C XYL2Q07993 356 aa6.84□□□□□ -1.31
TUB1YML085C NOB1Q08444 459 aaKnown RBP6.84□□□□□ -1.31
TUB1YML085C APC9Q12107 265 aa6.84□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 76.7 ms