RNA–Protein interactions for RNA: YDR006C

SOK1, Transcript of Protein of unknown function, yeastyeast

Gene SOK1, Length 2,706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOK1YDR006C FUS2Q05670 677 aa2.86□□□□□ -1.95
SOK1YDR006C SNT309Q06091 175 aaPredicted RBP2.86□□□□□ -1.95
SOK1YDR006C SLK19Q08581 821 aaKnown RBP2.86□□□□□ -1.95
SOK1YDR006C ABP140Q08641 628 aaKnown RBP2.86□□□□□ -1.95
SOK1YDR006C GRE1Q08969 168 aa2.86□□□□□ -1.95
SOK1YDR006C PUS9Q12069 462 aa2.86□□□□□ -1.95
SOK1YDR006C AHC1Q12433 566 aa2.86□□□□□ -1.95
SOK1YDR006C LAG2Q92325 660 aa2.86□□□□□ -1.95
SOK1YDR006C YLL066CQ99208 1374 aa2.86□□□□□ -1.95
SOK1YDR006C COX2P00410 251 aa2.86□□□□□ -1.95
SOK1YDR006C SEC53P07283 254 aaKnown RBP2.86□□□□□ -1.95
SOK1YDR006C RPS16AP0CX51 143 aaKnown RBP2.86□□□□□ -1.95
SOK1YDR006C RPS16BP0CX52 143 aaKnown RBP2.86□□□□□ -1.95
SOK1YDR006C PYC1P11154 1178 aaKnown RBP2.86□□□□□ -1.95
SOK1YDR006C MET16P18408 261 aaPredicted RBP2.86□□□□□ -1.95
SOK1YDR006C PWP1P21304 576 aaKnown RBP2.86□□□□□ -1.95
SOK1YDR006C PRD1P25375 712 aa2.86□□□□□ -1.95
SOK1YDR006C RDS1P25611 832 aa2.86□□□□□ -1.95
SOK1YDR006C SSE1P32589 693 aaKnown RBP2.86□□□□□ -1.95
SOK1YDR006C SDS22P36047 338 aa2.86□□□□□ -1.95
SOK1YDR006C YHR177WP38867 453 aa2.86□□□□□ -1.95
SOK1YDR006C HRB1P38922 454 aaKnown RBP RIP-Chip data2.86□□□□□ -1.95not detected
SOK1YDR006C PUS2P53167 370 aa2.86□□□□□ -1.95
SOK1YDR006C RSM24Q03976 319 aa2.86□□□□□ -1.95
SOK1YDR006C YDR179W-AQ03983 463 aa2.86□□□□□ -1.95
SOK1YDR006C YLR413WQ06689 675 aa2.86□□□□□ -1.95
SOK1YDR006C VAC14Q06708 880 aa2.86□□□□□ -1.95
SOK1YDR006C LOT6Q07923 191 aa2.86□□□□□ -1.95
SOK1YDR006C ATG9Q12142 997 aa2.86□□□□□ -1.95
SOK1YDR006C RLM1Q12224 676 aa2.86□□□□□ -1.95
SOK1YDR006C ZRT2Q12436 422 aa2.86□□□□□ -1.95
SOK1YDR006C ARD1P07347 238 aaPredicted RBP2.85□□□□□ -1.95
SOK1YDR006C TCP1P12612 559 aaKnown RBP2.85□□□□□ -1.95
SOK1YDR006C HMG2P12684 1045 aa2.85□□□□□ -1.95
SOK1YDR006C RPO26P20435 155 aa2.85□□□□□ -1.95
SOK1YDR006C DAL2P25335 343 aa2.85□□□□□ -1.95
SOK1YDR006C URK1P27515 501 aa2.85□□□□□ -1.95
SOK1YDR006C ZIP1P31111 875 aa2.85□□□□□ -1.95
SOK1YDR006C SPT8P38915 602 aa2.85□□□□□ -1.95
SOK1YDR006C CTK2P46962 323 aa2.85□□□□□ -1.95
SOK1YDR006C PAN2P53010 1115 aaPredicted RBP2.85□□□□□ -1.95
SOK1YDR006C LSC1P53598 329 aaKnown RBP2.85□□□□□ -1.95
SOK1YDR006C ENT5Q03769 411 aaKnown RBP2.85□□□□□ -1.95
SOK1YDR006C RCN2Q12044 265 aa2.85□□□□□ -1.95
SOK1YDR006C NPC2Q12408 173 aa2.85□□□□□ -1.95
SOK1YDR006C YJR112W-AQ3E743 109 aa2.85□□□□□ -1.95
SOK1YDR006C YLR415CO13578 112 aa2.85□□□□□ -1.95
SOK1YDR006C HIS5P07172 385 aa2.85□□□□□ -1.95
SOK1YDR006C CBP1P07252 654 aa2.85□□□□□ -1.95
SOK1YDR006C DFR1P07807 211 aaKnown RBP RIP-Chip data2.85□□□□□ -1.95not detected
SOK1YDR006C PRE10P21242 288 aaKnown RBP RIP-Chip data2.85□□□□□ -1.95not detected
SOK1YDR006C RVS161P25343 265 aaKnown RBP2.85□□□□□ -1.95
SOK1YDR006C RPC25P35718 212 aa2.85□□□□□ -1.95
SOK1YDR006C BNA4P38169 460 aa2.85□□□□□ -1.95
SOK1YDR006C PFF1P38244 976 aa2.85□□□□□ -1.95
SOK1YDR006C SIP3P38717 1229 aa2.85□□□□□ -1.95
SOK1YDR006C TOM71P38825 639 aaKnown RBP2.85□□□□□ -1.95
SOK1YDR006C YJL206CP39529 758 aa2.85□□□□□ -1.95
SOK1YDR006C PRM9P39551 298 aa2.85□□□□□ -1.95
SOK1YDR006C DLD2P46681 530 aaKnown RBP2.85□□□□□ -1.95
SOK1YDR006C PET130P47065 347 aa2.85□□□□□ -1.95
SOK1YDR006C MTR3P48240 250 aaPredicted RBP2.85□□□□□ -1.95
SOK1YDR006C PRP31P49704 494 aaPredicted RBP2.85□□□□□ -1.95
SOK1YDR006C BET4Q00618 327 aa2.85□□□□□ -1.95
SOK1YDR006C YMR178WQ03219 274 aaKnown RBP2.85□□□□□ -1.95
SOK1YDR006C URH1Q04179 340 aa2.85□□□□□ -1.95
SOK1YDR006C THI22Q06490 572 aa2.85□□□□□ -1.95
SOK1YDR006C YOR352WQ08816 343 aa2.85□□□□□ -1.95
SOK1YDR006C YOR111WQ99210 232 aa2.85□□□□□ -1.95
SOK1YDR006C KAR4P25583 335 aa2.84□□□□□ -1.95
SOK1YDR006C CIN8P27895 1000 aa2.84□□□□□ -1.95
SOK1YDR006C CYM1P32898 989 aa2.84□□□□□ -1.95
SOK1YDR006C LST4P34239 828 aa2.84□□□□□ -1.95
SOK1YDR006C TAF14P35189 244 aa2.84□□□□□ -1.95
SOK1YDR006C CMC1P36064 111 aa2.84□□□□□ -1.95
SOK1YDR006C TCD2P36101 447 aaKnown RBP2.84□□□□□ -1.95
SOK1YDR006C NUP133P36161 1157 aa2.84□□□□□ -1.95
SOK1YDR006C APN2P38207 520 aa2.84□□□□□ -1.95
SOK1YDR006C MMS21P38632 267 aa2.84□□□□□ -1.95
SOK1YDR006C PIH1P38768 344 aa2.84□□□□□ -1.95
SOK1YDR006C SLM1P40485 686 aa2.84□□□□□ -1.95
SOK1YDR006C CIN1P40987 1014 aa2.84□□□□□ -1.95
SOK1YDR006C GTO1P48239 356 aa2.84□□□□□ -1.95
SOK1YDR006C TRF5P48561 642 aaKnown RBP2.84□□□□□ -1.95
SOK1YDR006C TAF4P50105 388 aa2.84□□□□□ -1.95
SOK1YDR006C YGR111WP53265 400 aa2.84□□□□□ -1.95
SOK1YDR006C RPT4P53549 437 aaKnown RBP2.84□□□□□ -1.95
SOK1YDR006C ADA2Q02336 434 aa2.84□□□□□ -1.95
SOK1YDR006C KAP120Q02932 1032 aa2.84□□□□□ -1.95
SOK1YDR006C BUD22Q04347 519 aaKnown RBP2.84□□□□□ -1.95
SOK1YDR006C IVY1Q04934 453 aa2.84□□□□□ -1.95
SOK1YDR006C RTT103Q05543 409 aa2.84□□□□□ -1.95
SOK1YDR006C GGA1Q06336 557 aa2.84□□□□□ -1.95
SOK1YDR006C PAA1Q12447 191 aaKnown RBP2.84□□□□□ -1.95
SOK1YDR006C CTF3Q12748 733 aa2.84□□□□□ -1.95
SOK1YDR006C MES1P00958 751 aaKnown RBP2.84□□□□□ -1.95
SOK1YDR006C KIN2P13186 1147 aaKnown RBP2.84□□□□□ -1.95
SOK1YDR006C CNA1P23287 553 aa2.84□□□□□ -1.95
SOK1YDR006C CDC20P26309 610 aa2.84□□□□□ -1.95
SOK1YDR006C YME2P32843 850 aa2.84□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms