RNA–Protein interactions for RNA: YCL056C

PEX34, Transcript of Protein that regulates peroxisome populations, yeast

Gene PEX34, Length 435 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX34	YCL056C	SGV1	P23293	657 aa	Known RBP	4.24	□□□□□ -1.73
PEX34	YCL056C	SAC6	P32599	642 aa	Known RBP	4.24	□□□□□ -1.73
PEX34	YCL056C	MRPL4	P36517	319 aa		4.24	□□□□□ -1.73
PEX34	YCL056C	SNG1	P46950	547 aa		4.24	□□□□□ -1.73
PEX34	YCL056C	ALT2	P52892	507 aa		4.24	□□□□□ -1.73
PEX34	YCL056C	RLI1	Q03195	608 aa	Known RBP	4.24	□□□□□ -1.73
PEX34	YCL056C	AMD1	P15274	810 aa	Known RBP	4.23	□□□□□ -1.73
PEX34	YCL056C	BOS1	P25385	244 aa		4.23	□□□□□ -1.73
PEX34	YCL056C	LDB16	P25587	256 aa		4.23	□□□□□ -1.73
PEX34	YCL056C	SYN8	P31377	255 aa		4.23	□□□□□ -1.73
PEX34	YCL056C	TIF3	P34167	436 aa	Known RBP	4.23	□□□□□ -1.73
PEX34	YCL056C	PMU1	P36069	295 aa		4.23	□□□□□ -1.73
PEX34	YCL056C	TUL1	P36096	758 aa		4.23	□□□□□ -1.73
PEX34	YCL056C	YKL023W	P36103	277 aa	Known RBP	4.23	□□□□□ -1.73
PEX34	YCL056C	ICS2	P38284	255 aa		4.23	□□□□□ -1.73
PEX34	YCL056C	IES5	P40060	125 aa		4.23	□□□□□ -1.73
PEX34	YCL056C	FAR3	P46671	204 aa		4.23	□□□□□ -1.73
PEX34	YCL056C	EFM6	P53970	246 aa		4.23	□□□□□ -1.73
PEX34	YCL056C	ADD37	Q03233	198 aa		4.23	□□□□□ -1.73
PEX34	YCL056C	SYO1	Q07395	620 aa		4.23	□□□□□ -1.73
PEX34	YCL056C	ENT4	Q07872	247 aa		4.23	□□□□□ -1.73
PEX34	YCL056C	YDL009C	Q12210	107 aa		4.23	□□□□□ -1.73
PEX34	YCL056C	ATR1	P13090	542 aa		4.22	□□□□□ -1.73
PEX34	YCL056C	PUP3	P25451	205 aa	Known RBP	4.22	□□□□□ -1.73
PEX34	YCL056C	SGF29	P25554	259 aa		4.22	□□□□□ -1.73
PEX34	YCL056C	YBL055C	P34220	418 aa	Predicted RBP	4.22	□□□□□ -1.73
PEX34	YCL056C	NUP133	P36161	1157 aa		4.22	□□□□□ -1.73
PEX34	YCL056C	YEL068C	P39977	110 aa		4.22	□□□□□ -1.73
PEX34	YCL056C	SIP4	P46954	829 aa		4.22	□□□□□ -1.73
PEX34	YCL056C	LYS4	P49367	693 aa	Predicted RBP	4.22	□□□□□ -1.73
PEX34	YCL056C	BUD32	P53323	261 aa		4.22	□□□□□ -1.73
PEX34	YCL056C	KGD1	P20967	1014 aa	Known RBP	4.21	□□□□□ -1.74
PEX34	YCL056C	PRE8	P23639	250 aa		4.21	□□□□□ -1.74
PEX34	YCL056C	MAL33	P38157	468 aa		4.21	□□□□□ -1.74
PEX34	YCL056C	SHO1	P40073	367 aa		4.21	□□□□□ -1.74
PEX34	YCL056C	CBK1	P53894	756 aa		4.21	□□□□□ -1.74
PEX34	YCL056C	ATG16	Q03818	150 aa		4.21	□□□□□ -1.74
PEX34	YCL056C	BNA5	Q05979	453 aa		4.21	□□□□□ -1.74
PEX34	YCL056C	YCL021W-A	Q96VH3	125 aa		4.21	□□□□□ -1.74
PEX34	YCL056C	YCR022C	P25620	114 aa		4.2	□□□□□ -1.74
PEX34	YCL056C	IMG1	P25626	169 aa		4.2	□□□□□ -1.74
PEX34	YCL056C	RPL32	P38061	130 aa	Known RBP	4.2	□□□□□ -1.74
PEX34	YCL056C	TPM2	P40414	161 aa		4.2	□□□□□ -1.74
PEX34	YCL056C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	RIP-Chip
PEX34	YCL056C	ARC1	P46672	376 aa	Known RBP	4.2	□□□□□ -1.74
PEX34	YCL056C	RAD30	Q04049	632 aa		4.2	□□□□□ -1.74
PEX34	YCL056C	MRPL51	Q06090	140 aa	Predicted RBP	4.2	□□□□□ -1.74
PEX34	YCL056C	PMR1	P13586	950 aa		4.19	□□□□□ -1.74
PEX34	YCL056C	SUI2	P20459	304 aa	Known RBP	4.19	□□□□□ -1.74
PEX34	YCL056C	RER1	P25560	188 aa		4.19	□□□□□ -1.74
PEX34	YCL056C	RRN3	P36070	627 aa		4.19	□□□□□ -1.74
PEX34	YCL056C	FAA2	P39518	744 aa		4.19	□□□□□ -1.74
PEX34	YCL056C	DSD1	P53095	428 aa		4.19	□□□□□ -1.74
PEX34	YCL056C	YGR126W	P53274	230 aa		4.19	□□□□□ -1.74
PEX34	YCL056C	MSC1	Q03104	513 aa		4.19	□□□□□ -1.74
PEX34	YCL056C	VIP1	Q06685	1146 aa	Known RBP	4.19	□□□□□ -1.74
PEX34	YCL056C	ARD1	P07347	238 aa	Predicted RBP	4.18	□□□□□ -1.74
PEX34	YCL056C	CDC24	P11433	854 aa	Predicted RBP	4.18	□□□□□ -1.74
PEX34	YCL056C	ALG8	P40351	577 aa		4.18	□□□□□ -1.74
PEX34	YCL056C	YJR154W	P47181	346 aa		4.18	□□□□□ -1.74
PEX34	YCL056C	BSC5	P53755	489 aa		4.18	□□□□□ -1.74
PEX34	YCL056C	WSC2	P53832	503 aa		4.18	□□□□□ -1.74
PEX34	YCL056C	SLD5	Q03406	294 aa		4.18	□□□□□ -1.74
PEX34	YCL056C	HNT3	Q08702	217 aa		4.18	□□□□□ -1.74
PEX34	YCL056C	SKM1	Q12469	655 aa		4.18	□□□□□ -1.74
PEX34	YCL056C	FUM1	P08417	488 aa	Known RBP	4.17	□□□□□ -1.74
PEX34	YCL056C	FRE1	P32791	686 aa		4.17	□□□□□ -1.74
PEX34	YCL056C	AUR1	P36107	401 aa	Predicted RBP	4.17	□□□□□ -1.74
PEX34	YCL056C	APT1	P49435	187 aa	Known RBP	4.17	□□□□□ -1.74
PEX34	YCL056C	MSO1	P53604	210 aa	Known RBP	4.17	□□□□□ -1.74
PEX34	YCL056C	YDL057W	Q07379	328 aa		4.17	□□□□□ -1.74
PEX34	YCL056C	NCE102	Q12207	173 aa	RIP-Chip data	4.17	□□□□□ -1.74	not detected
PEX34	YCL056C	MF(ALPHA)1	P01149	165 aa		4.16	□□□□□ -1.74
PEX34	YCL056C	YCR007C	P25354	239 aa		4.16	□□□□□ -1.74
PEX34	YCL056C	PUT3	P25502	979 aa	Predicted RBP	4.16	□□□□□ -1.74
PEX34	YCL056C	SSE2	P32590	693 aa	Known RBP	4.16	□□□□□ -1.74
PEX34	YCL056C	YBR144C	P34215	104 aa		4.16	□□□□□ -1.74
PEX34	YCL056C	CIN4	P39110	191 aa		4.16	□□□□□ -1.74
PEX34	YCL056C	YJR008W	P47085	338 aa		4.16	□□□□□ -1.74
PEX34	YCL056C	IRC15	Q02733	499 aa		4.16	□□□□□ -1.74
PEX34	YCL056C	VMS1	Q04311	632 aa	Known RBP	4.16	□□□□□ -1.74
PEX34	YCL056C	BUD22	Q04347	519 aa	Known RBP	4.16	□□□□□ -1.74
PEX34	YCL056C	IVY1	Q04934	453 aa		4.16	□□□□□ -1.74
PEX34	YCL056C	VPS74	Q06385	345 aa		4.16	□□□□□ -1.74
PEX34	YCL056C	FUN19	P28003	413 aa	Predicted RBP	4.15	□□□□□ -1.75
PEX34	YCL056C	YHR210C	P38893	341 aa		4.15	□□□□□ -1.75
PEX34	YCL056C	HEL2	Q05580	639 aa	Known RBP	4.15	□□□□□ -1.75
PEX34	YCL056C	LUC7	Q07508	261 aa	Predicted RBP	4.15	□□□□□ -1.75
PEX34	YCL056C	YOR365C	Q08844	703 aa		4.15	□□□□□ -1.75
PEX34	YCL056C	YPL272C	Q08984	517 aa		4.15	□□□□□ -1.75
PEX34	YCL056C	CTF3	Q12748	733 aa		4.15	□□□□□ -1.75
PEX34	YCL056C	YIH1	P25637	258 aa		4.14	□□□□□ -1.75
PEX34	YCL056C	DRN1	P53255	507 aa	Known RBP	4.14	□□□□□ -1.75
PEX34	YCL056C	RBG2	P53295	368 aa	Known RBP	4.14	□□□□□ -1.75
PEX34	YCL056C	YSA1	Q01976	231 aa		4.14	□□□□□ -1.75
PEX34	YCL056C	LSP1	Q12230	341 aa	Known RBP	4.14	□□□□□ -1.75
PEX34	YCL056C	RAD52	P06778	471 aa	Known RBP	4.13	□□□□□ -1.75
PEX34	YCL056C	EXO70	P19658	623 aa		4.13	□□□□□ -1.75
PEX34	YCL056C	UTR4	P32626	227 aa		4.13	□□□□□ -1.75
PEX34	YCL056C	UBP11	P36026	717 aa		4.13	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 25.6 ms