RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 CATIPQ7Z7H3 387 aa11.78□□□□□ -0.52
PHGDH-224ENST00000641711 MICU3Q86XE3 530 aa11.78□□□□□ -0.52
PHGDH-224ENST00000641711 SPICE1Q8N0Z3 855 aa11.78□□□□□ -0.52
PHGDH-224ENST00000641711 WASF1Q92558 559 aa11.78□□□□□ -0.52
PHGDH-224ENST00000641711 TRIM44Q96DX7 344 aaPredicted RBP11.78□□□□□ -0.52
PHGDH-224ENST00000641711 ERO1AQ96HE7 468 aa11.78□□□□□ -0.52
PHGDH-224ENST00000641711 ZKSCAN3Q9BRR0 538 aa11.78□□□□□ -0.52
PHGDH-224ENST00000641711 PRDM10Q9NQV6 1147 aa11.78□□□□□ -0.52
PHGDH-224ENST00000641711 DACT1Q9NYF0 836 aa11.78□□□□□ -0.52
PHGDH-224ENST00000641711 ADAMTS5Q9UNA0 930 aa11.78□□□□□ -0.52
PHGDH-224ENST00000641711 ATP2A1O14983 1001 aa11.77□□□□□ -0.53
PHGDH-224ENST00000641711 FOXN1O15353 648 aa11.77□□□□□ -0.53
PHGDH-224ENST00000641711 RAD21O60216 631 aa11.77□□□□□ -0.53
PHGDH-224ENST00000641711 FKTNO75072 461 aa11.77□□□□□ -0.53
PHGDH-224ENST00000641711 CYP2C8P10632 490 aa11.77□□□□□ -0.53
PHGDH-224ENST00000641711 KIF5BP33176 963 aa11.77□□□□□ -0.53
PHGDH-224ENST00000641711 SP3Q02447 781 aa11.77□□□□□ -0.53
PHGDH-224ENST00000641711 SSRP1Q08945 709 aaKnown RBP11.77□□□□□ -0.53
PHGDH-224ENST00000641711 CCDC96Q2M329 555 aa11.77□□□□□ -0.53
PHGDH-224ENST00000641711 KRT40Q6A162 431 aa11.77□□□□□ -0.53
PHGDH-224ENST00000641711 RAB11FIP4Q86YS3 637 aa11.77□□□□□ -0.53
PHGDH-224ENST00000641711 LINC00301Q8NCQ3 95 aa11.77□□□□□ -0.53
PHGDH-224ENST00000641711 RNF214Q8ND24 703 aa11.77□□□□□ -0.53
PHGDH-224ENST00000641711 BICD2Q8TD16 824 aa11.77□□□□□ -0.53
PHGDH-224ENST00000641711 KCNG4Q8TDN1 519 aa11.77□□□□□ -0.53
PHGDH-224ENST00000641711 P2RX7Q99572 595 aaKnown RBP11.77□□□□□ -0.53
PHGDH-224ENST00000641711 TNMDQ9H2S6 317 aa11.77□□□□□ -0.53
PHGDH-224ENST00000641711 DOCK3Q8IZD9 2030 aa11.77□□□□□ -0.53
PHGDH-224ENST00000641711 TMEM232C9JQI7 657 aa11.76□□□□□ -0.53
PHGDH-224ENST00000641711 NR1I2O75469 434 aa11.76□□□□□ -0.53
PHGDH-224ENST00000641711 TBC1D8O95759 1140 aa11.76□□□□□ -0.53
PHGDH-224ENST00000641711 PARP1P09874 1014 aaKnown RBP11.76□□□□□ -0.53
PHGDH-224ENST00000641711 RXRAP19793 462 aa11.76□□□□□ -0.53
PHGDH-224ENST00000641711 U2AF2P26368 475 aaKnown RBP eCLIP11.76□□□□□ -0.53
PHGDH-224ENST00000641711 SMARCA1P28370 1054 aa11.76□□□□□ -0.53
PHGDH-224ENST00000641711 GNAQP50148 359 aa11.76□□□□□ -0.53
PHGDH-224ENST00000641711 ERVK-9P63128 1117 aa11.76□□□□□ -0.53
PHGDH-224ENST00000641711 ERVK-24P63145 666 aa11.76□□□□□ -0.53
PHGDH-224ENST00000641711 TROAPQ12815 778 aa11.76□□□□□ -0.53
PHGDH-224ENST00000641711 DGKZQ13574 1117 aa11.76□□□□□ -0.53
PHGDH-224ENST00000641711 KIF22Q14807 665 aa11.76□□□□□ -0.53
PHGDH-224ENST00000641711 GRM4Q14833 912 aa11.76□□□□□ -0.53
PHGDH-224ENST00000641711 ADALQ6DHV7 355 aa11.76□□□□□ -0.53
PHGDH-224ENST00000641711 NBPF11Q86T75 865 aa11.76□□□□□ -0.53
PHGDH-224ENST00000641711 CCAR1Q8IX12 1150 aaKnown RBP11.76□□□□□ -0.53
PHGDH-224ENST00000641711 ZNF654Q8IZM8 581 aa11.76□□□□□ -0.53
PHGDH-224ENST00000641711 FANCBQ8NB91 859 aa11.76□□□□□ -0.53
PHGDH-224ENST00000641711 SHCBP1Q8NEM2 672 aa11.76□□□□□ -0.53
PHGDH-224ENST00000641711 ENGASEQ8NFI3 743 aa11.76□□□□□ -0.53
PHGDH-224ENST00000641711 CTCFLQ8NI51 663 aaPredicted RBP11.76□□□□□ -0.53
PHGDH-224ENST00000641711 LZTS2Q9BRK4 669 aa11.76□□□□□ -0.53
PHGDH-224ENST00000641711 MAF1Q9H063 256 aa11.76□□□□□ -0.53
PHGDH-224ENST00000641711 RBBP6Q7Z6E9 1792 aaKnown RBP11.75□□□□□ -0.53
PHGDH-224ENST00000641711 ESPNB1AK53 854 aa11.75□□□□□ -0.53
PHGDH-224ENST00000641711 KIF28PB7ZC32 967 aa11.75□□□□□ -0.53
PHGDH-224ENST00000641711 VWA5AO00534 786 aa11.75□□□□□ -0.53
PHGDH-224ENST00000641711 PPFIA3O75145 1194 aa11.75□□□□□ -0.53
PHGDH-224ENST00000641711 CAVIN2O95810 425 aa11.75□□□□□ -0.53
PHGDH-224ENST00000641711 SLC25A27O95847 323 aa11.75□□□□□ -0.53
PHGDH-224ENST00000641711 MYCNP04198 464 aaPredicted RBP11.75□□□□□ -0.53
PHGDH-224ENST00000641711 MAPK4P31152 587 aa11.75□□□□□ -0.53
PHGDH-224ENST00000641711 PRMT2P55345 433 aa11.75□□□□□ -0.53
PHGDH-224ENST00000641711 LACTBP83111 547 aaPredicted RBP11.75□□□□□ -0.53
PHGDH-224ENST00000641711 TRAF1Q13077 416 aa11.75□□□□□ -0.53
PHGDH-224ENST00000641711 IKQ13123 557 aaPredicted RBP11.75□□□□□ -0.53
PHGDH-224ENST00000641711 TRIM29Q14134 588 aa11.75□□□□□ -0.53
PHGDH-224ENST00000641711 SYDE2Q5VT97 1194 aa11.75□□□□□ -0.53
PHGDH-224ENST00000641711 ANO1Q5XXA6 986 aa11.75□□□□□ -0.53
PHGDH-224ENST00000641711 CCDC73Q6ZRK6 1079 aa11.75□□□□□ -0.53
PHGDH-224ENST00000641711 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.75□□□□□ -0.53
PHGDH-224ENST00000641711 TRIM22Q8IYM9 498 aa11.75□□□□□ -0.53
PHGDH-224ENST00000641711 GPRC5AQ8NFJ5 357 aa11.75□□□□□ -0.53
PHGDH-224ENST00000641711 PHKBQ93100 1093 aa11.75□□□□□ -0.53
PHGDH-224ENST00000641711 ATG4CQ96DT6 458 aa11.75□□□□□ -0.53
PHGDH-224ENST00000641711 FTOQ9C0B1 505 aaKnown RBP eCLIP11.75□□□□□ -0.53
PHGDH-224ENST00000641711 RNF39Q9H2S5 420 aa11.75□□□□□ -0.53
PHGDH-224ENST00000641711 SLC38A10Q9HBR0 1119 aa11.75□□□□□ -0.53
PHGDH-224ENST00000641711 RRAGDQ9NQL2 400 aaPredicted RBP11.75□□□□□ -0.53
PHGDH-224ENST00000641711 RBM28Q9NW13 759 aaKnown RBP11.75□□□□□ -0.53
PHGDH-224ENST00000641711 BAZ2BQ9UIF8 2168 aaKnown RBP11.75□□□□□ -0.53
PHGDH-224ENST00000641711 PCNTO95613 3336 aa11.75□□□□□ -0.53
PHGDH-224ENST00000641711 PLXNB2O15031 1838 aa11.74□□□□□ -0.53
PHGDH-224ENST00000641711 PALM3A6NDB9 673 aaPredicted RBP11.74□□□□□ -0.53
PHGDH-224ENST00000641711 SPTLC2O15270 562 aa11.74□□□□□ -0.53
PHGDH-224ENST00000641711 ZBED4O75132 1171 aa11.74□□□□□ -0.53
PHGDH-224ENST00000641711 DEXIO95424 95 aa11.74□□□□□ -0.53
PHGDH-224ENST00000641711 CLCN1P35523 988 aa11.74□□□□□ -0.53
PHGDH-224ENST00000641711 CEBPZQ03701 1054 aaKnown RBP11.74□□□□□ -0.53
PHGDH-224ENST00000641711 FAM160A1Q05DH4 1040 aa11.74□□□□□ -0.53
PHGDH-224ENST00000641711 TYRO3Q06418 890 aa11.74□□□□□ -0.53
PHGDH-224ENST00000641711 SNW1Q13573 536 aaKnown RBP11.74□□□□□ -0.53
PHGDH-224ENST00000641711 STK38Q15208 465 aa11.74□□□□□ -0.53
PHGDH-224ENST00000641711 TKFCQ3LXA3 575 aa11.74□□□□□ -0.53
PHGDH-224ENST00000641711 KCTD1Q719H9 257 aa11.74□□□□□ -0.53
PHGDH-224ENST00000641711 ANKRD13CQ8N6S4 541 aa11.74□□□□□ -0.53
PHGDH-224ENST00000641711 REPS2Q8NFH8 660 aa11.74□□□□□ -0.53
PHGDH-224ENST00000641711 ZNF296Q8WUU4 475 aaPredicted RBP11.74□□□□□ -0.53
PHGDH-224ENST00000641711 AIFM3Q96NN9 605 aa11.74□□□□□ -0.53
PHGDH-224ENST00000641711 NUP88Q99567 741 aaPredicted RBP11.74□□□□□ -0.53
PHGDH-224ENST00000641711 MYL10Q9BUA6 226 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 162.1 ms