RNA–Protein interactions for RNA: ENST00000641115.1

PHGDH-210, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,638 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-210ENST00000641115 CFAP45Q9UL16 551 aa22.72■■□□□ 1.23
PHGDH-210ENST00000641115 MRPL11Q9Y3B7 192 aaKnown RBP22.72■■□□□ 1.23
PHGDH-210ENST00000641115 SMCHD1A6NHR9 2005 aa22.71■■□□□ 1.23
PHGDH-210ENST00000641115 CCDC194A0A1B0GVG4 234 aa22.71■■□□□ 1.23
PHGDH-210ENST00000641115 OAZ1P54368 228 aa22.71■■□□□ 1.23
PHGDH-210ENST00000641115 RASAL3Q86YV0 1011 aa22.71■■□□□ 1.23
PHGDH-210ENST00000641115 AGBL1Q96MI9 1066 aa22.71■■□□□ 1.23
PHGDH-210ENST00000641115 RAVER2Q9HCJ3 691 aaKnown RBP22.71■■□□□ 1.23
PHGDH-210ENST00000641115 PNMA3Q9UL41 463 aa22.71■■□□□ 1.23
PHGDH-210ENST00000641115 PCDHA6Q9UN73 950 aa22.71■■□□□ 1.23
PHGDH-210ENST00000641115 PCDHA8Q9Y5H6 950 aa22.71■■□□□ 1.23
PHGDH-210ENST00000641115 M0R2N6 131 aa22.71■■□□□ 1.23
PHGDH-210ENST00000641115 RILPL1Q5EBL4 403 aa22.71■■□□□ 1.23
PHGDH-210ENST00000641115 GPAT2Q6NUI2 795 aa22.71■■□□□ 1.23
PHGDH-210ENST00000641115 ASCC2Q9H1I8 757 aaPredicted RBP22.71■■□□□ 1.23
PHGDH-210ENST00000641115 NOL7Q9UMY1 257 aaKnown RBP22.71■■□□□ 1.23
PHGDH-210ENST00000641115 CNPY2Q9Y2B0 182 aa22.71■■□□□ 1.23
PHGDH-210ENST00000641115 PIK3AP1Q6ZUJ8 805 aa22.7■■□□□ 1.22
PHGDH-210ENST00000641115 KRT25Q7Z3Z0 450 aa22.7■■□□□ 1.22
PHGDH-210ENST00000641115 TEX2Q8IWB9 1127 aa22.7■■□□□ 1.22
PHGDH-210ENST00000641115 MB21D1Q8N884 522 aa22.7■■□□□ 1.22
PHGDH-210ENST00000641115 RASGRP4Q8TDF6 673 aa22.7■■□□□ 1.22
PHGDH-210ENST00000641115 ADAMTS3O15072 1205 aa22.69■■□□□ 1.22
PHGDH-210ENST00000641115 FIBPO43427 364 aa22.69■■□□□ 1.22
PHGDH-210ENST00000641115 TAL1P17542 331 aaPredicted RBP22.69■■□□□ 1.22
PHGDH-210ENST00000641115 CSPP1Q1MSJ5 1256 aa22.69■■□□□ 1.22
PHGDH-210ENST00000641115 REPS2Q8NFH8 660 aa22.69■■□□□ 1.22
PHGDH-210ENST00000641115 SCAND2PQ9GZW5 306 aaPredicted RBP22.69■■□□□ 1.22
PHGDH-210ENST00000641115 BIN2Q9UBW5 565 aaPredicted RBP22.69■■□□□ 1.22
PHGDH-210ENST00000641115 SLC45A1Q9Y2W3 748 aa22.69■■□□□ 1.22
PHGDH-210ENST00000641115 ALAS1P13196 640 aa22.68■■□□□ 1.22
PHGDH-210ENST00000641115 MCM4P33991 863 aa22.68■■□□□ 1.22
PHGDH-210ENST00000641115 HERVK_113P62684 666 aa22.68■■□□□ 1.22
PHGDH-210ENST00000641115 BRI3BPQ8WY22 251 aa22.68■■□□□ 1.22
PHGDH-210ENST00000641115 TFIP11Q9UBB9 837 aaKnown RBP22.68■■□□□ 1.22
PHGDH-210ENST00000641115 ZNF214Q9UL59 606 aaPredicted RBP22.68■■□□□ 1.22
PHGDH-210ENST00000641115 DDX11L8A8MPP1 907 aa22.68■■□□□ 1.22
PHGDH-210ENST00000641115 ATP2A1O14983 1001 aa22.68■■□□□ 1.22
PHGDH-210ENST00000641115 SLC10A3P09131 477 aa22.68■■□□□ 1.22
PHGDH-210ENST00000641115 TMEM132BQ14DG7 1078 aa22.68■■□□□ 1.22
PHGDH-210ENST00000641115 NFKBIBQ15653 356 aa22.68■■□□□ 1.22
PHGDH-210ENST00000641115 UBE2SQ16763 222 aa22.68■■□□□ 1.22
PHGDH-210ENST00000641115 EARS2Q5JPH6 523 aaKnown RBP22.68■■□□□ 1.22
PHGDH-210ENST00000641115 JAKMIP3Q5VZ66 844 aa22.68■■□□□ 1.22
PHGDH-210ENST00000641115 MCTP2Q6DN12 878 aa22.68■■□□□ 1.22
PHGDH-210ENST00000641115 SNRNP48Q6IEG0 339 aaKnown RBP22.68■■□□□ 1.22
PHGDH-210ENST00000641115 LBX2Q6XYB7 198 aa22.68■■□□□ 1.22
PHGDH-210ENST00000641115 ANKRD23Q86SG2 305 aa22.68■■□□□ 1.22
PHGDH-210ENST00000641115 HHIPL1Q96JK4 782 aa22.68■■□□□ 1.22
PHGDH-210ENST00000641115 USP28Q96RU2 1077 aa22.68■■□□□ 1.22
PHGDH-210ENST00000641115 P2RX7Q99572 595 aaKnown RBP22.68■■□□□ 1.22
PHGDH-210ENST00000641115 TEX13BQ9BXU2 312 aa22.68■■□□□ 1.22
PHGDH-210ENST00000641115 FAM205CA6NFA0 338 aa22.67■■□□□ 1.22
PHGDH-210ENST00000641115 BTBD19C9JJ37 291 aa22.67■■□□□ 1.22
PHGDH-210ENST00000641115 CLK2P49760 499 aaKnown RBP22.67■■□□□ 1.22
PHGDH-210ENST00000641115 CEBPZQ03701 1054 aaKnown RBP22.67■■□□□ 1.22
PHGDH-210ENST00000641115 PLS1Q14651 629 aa22.67■■□□□ 1.22
PHGDH-210ENST00000641115 NONOQ15233 471 aaKnown RBP eCLIP22.67■■□□□ 1.22
PHGDH-210ENST00000641115 CCDC102AQ96A19 550 aa22.67■■□□□ 1.22
PHGDH-210ENST00000641115 POLR3EQ9NVU0 708 aa22.67■■□□□ 1.22
PHGDH-210ENST00000641115 TMEM260Q9NX78 707 aa22.67■■□□□ 1.22
PHGDH-210ENST00000641115 MANSC4A6NHS7 340 aaPredicted RBP22.66■■□□□ 1.22
PHGDH-210ENST00000641115 PDHXO00330 501 aa22.66■■□□□ 1.22
PHGDH-210ENST00000641115 OPLAHO14841 1288 aa22.66■■□□□ 1.22
PHGDH-210ENST00000641115 TRAPPC10P48553 1259 aa22.66■■□□□ 1.22
PHGDH-210ENST00000641115 NOM1Q5C9Z4 860 aaKnown RBP22.66■■□□□ 1.22
PHGDH-210ENST00000641115 USP17L6PQ6QN14 398 aa22.66■■□□□ 1.22
PHGDH-210ENST00000641115 MCF2L2Q86YR7 1114 aa22.66■■□□□ 1.22
PHGDH-210ENST00000641115 SPATA32Q96LK8 384 aa22.66■■□□□ 1.22
PHGDH-210ENST00000641115 GDPD2Q9HCC8 539 aa22.66■■□□□ 1.22
PHGDH-210ENST00000641115 HOMER2Q9NSB8 354 aa22.66■■□□□ 1.22
PHGDH-210ENST00000641115 PIK3CDO00329 1044 aa22.65■■□□□ 1.22
PHGDH-210ENST00000641115 MEIS2O14770 477 aa22.65■■□□□ 1.22
PHGDH-210ENST00000641115 CFBP00751 764 aa22.65■■□□□ 1.22
PHGDH-210ENST00000641115 AP3B2Q13367 1082 aa22.65■■□□□ 1.22
PHGDH-210ENST00000641115 ANO1Q5XXA6 986 aa22.65■■□□□ 1.22
PHGDH-210ENST00000641115 GTF3C2Q8WUA4 911 aaPredicted RBP22.65■■□□□ 1.22
PHGDH-210ENST00000641115 FTOQ9C0B1 505 aaKnown RBP eCLIP22.65■■□□□ 1.22
PHGDH-210ENST00000641115 RTEL1Q9NZ71 1219 aa22.65■■□□□ 1.22
PHGDH-210ENST00000641115 GCOM1H8Y6P7 765 aaPredicted RBP22.64■■□□□ 1.22
PHGDH-210ENST00000641115 POLR2MP0CAP2 368 aa22.64■■□□□ 1.22
PHGDH-210ENST00000641115 ATP2B1P20020 1258 aa22.64■■□□□ 1.22
PHGDH-210ENST00000641115 STAT3P40763 770 aa22.64■■□□□ 1.22
PHGDH-210ENST00000641115 TOB1P50616 345 aaPredicted RBP22.64■■□□□ 1.22
PHGDH-210ENST00000641115 TKFCQ3LXA3 575 aa22.64■■□□□ 1.22
PHGDH-210ENST00000641115 SMCR8Q8TEV9 937 aaPredicted RBP22.64■■□□□ 1.22
PHGDH-210ENST00000641115 TRERF1Q96PN7 1200 aa22.64■■□□□ 1.22
PHGDH-210ENST00000641115 RNF146Q9NTX7 359 aa22.64■■□□□ 1.22
PHGDH-210ENST00000641115 CLIC4Q9Y696 253 aa22.64■■□□□ 1.22
PHGDH-210ENST00000641115 TESPA1A2RU30 521 aaPredicted RBP22.64■■□□□ 1.21
PHGDH-210ENST00000641115 SPDYE3A6NKU9 549 aa22.64■■□□□ 1.21
PHGDH-210ENST00000641115 FOSP01100 380 aaPredicted RBP22.64■■□□□ 1.21
PHGDH-210ENST00000641115 PTMSP20962 102 aa22.64■■□□□ 1.21
PHGDH-210ENST00000641115 INF2Q27J81 1249 aa22.64■■□□□ 1.21
PHGDH-210ENST00000641115 TMEM87AQ8NBN3 555 aa22.64■■□□□ 1.21
PHGDH-210ENST00000641115 CLEC4DQ8WXI8 215 aa22.64■■□□□ 1.21
PHGDH-210ENST00000641115 PAGR1Q9BTK6 254 aa22.64■■□□□ 1.21
PHGDH-210ENST00000641115 YEATS4O95619 227 aa22.63■■□□□ 1.21
PHGDH-210ENST00000641115 NASPP49321 788 aaPredicted RBP22.63■■□□□ 1.21
PHGDH-210ENST00000641115 STK38Q15208 465 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms