RNA–Protein interactions for RNA: ENST00000619541.4

SYNRG-225, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-225ENST00000619541 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.18■□□□□ 0.18
SYNRG-225ENST00000619541 LIMA1Q9UHB6 759 aaKnown RBP16.18■□□□□ 0.18
SYNRG-225ENST00000619541 FAM153AQ9UHL3 310 aa16.18■□□□□ 0.18
SYNRG-225ENST00000619541 OPLAHO14841 1288 aa16.18■□□□□ 0.18
SYNRG-225ENST00000619541 CCDC57Q2TAC2 916 aa16.18■□□□□ 0.18
SYNRG-225ENST00000619541 FMNL3Q8IVF7 1028 aa16.18■□□□□ 0.18
SYNRG-225ENST00000619541 MB21D1Q8N884 522 aa16.18■□□□□ 0.18
SYNRG-225ENST00000619541 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.18■□□□□ 0.18
SYNRG-225ENST00000619541 ITGB4P16144 1822 aa16.18■□□□□ 0.18
SYNRG-225ENST00000619541 PPP1R12AO14974 1030 aaPredicted RBP16.18■□□□□ 0.18
SYNRG-225ENST00000619541 CAPN6Q9Y6Q1 641 aa16.18■□□□□ 0.18
SYNRG-225ENST00000619541 ENOX2Q16206 610 aaKnown RBP16.17■□□□□ 0.18
SYNRG-225ENST00000619541 PNMA8AQ86V59 439 aaPredicted RBP16.17■□□□□ 0.18
SYNRG-225ENST00000619541 IFIH1Q9BYX4 1025 aaKnown RBP16.17■□□□□ 0.18
SYNRG-225ENST00000619541 NAPBQ9H115 298 aa16.17■□□□□ 0.18
SYNRG-225ENST00000619541 FAM217BQ9NTX9 383 aaPredicted RBP16.17■□□□□ 0.18
SYNRG-225ENST00000619541 ZSWIM5Q9P217 1185 aa16.17■□□□□ 0.18
SYNRG-225ENST00000619541 SNX12Q9UMY4 172 aa16.17■□□□□ 0.18
SYNRG-225ENST00000619541 ANKRD18BA2A2Z9 1011 aa16.17■□□□□ 0.18
SYNRG-225ENST00000619541 FMNL1O95466 1100 aaPredicted RBP16.17■□□□□ 0.18
SYNRG-225ENST00000619541 PLEKP08567 350 aaPredicted RBP16.17■□□□□ 0.18
SYNRG-225ENST00000619541 MTIF2P46199 727 aaKnown RBP16.17■□□□□ 0.18
SYNRG-225ENST00000619541 MSL1Q68DK7 614 aa16.17■□□□□ 0.18
SYNRG-225ENST00000619541 EMBQ6PCB8 327 aa16.17■□□□□ 0.18
SYNRG-225ENST00000619541 WDR59Q6PJI9 974 aa16.17■□□□□ 0.18
SYNRG-225ENST00000619541 THOC1Q96FV9 657 aaKnown RBP16.17■□□□□ 0.18
SYNRG-225ENST00000619541 HEXIM1O94992 359 aaKnown RBP16.17■□□□□ 0.18
SYNRG-225ENST00000619541 CDC25CP30307 473 aa16.17■□□□□ 0.18
SYNRG-225ENST00000619541 TRIM28Q13263 835 aaKnown RBP16.17■□□□□ 0.18
SYNRG-225ENST00000619541 FBXL16Q8N461 479 aa16.17■□□□□ 0.18
SYNRG-225ENST00000619541 LY9Q9HBG7 655 aa16.17■□□□□ 0.18
SYNRG-225ENST00000619541 TJP1Q07157 1748 aa16.17■□□□□ 0.18
SYNRG-225ENST00000619541 A6NNZ2 444 aa16.16■□□□□ 0.18
SYNRG-225ENST00000619541 SEMA3EO15041 775 aa16.16■□□□□ 0.18
SYNRG-225ENST00000619541 PRCPP42785 496 aa16.16■□□□□ 0.18
SYNRG-225ENST00000619541 SKOR1P84550 965 aa16.16■□□□□ 0.18
SYNRG-225ENST00000619541 TUBB8Q3ZCM7 444 aa16.16■□□□□ 0.18
SYNRG-225ENST00000619541 NLRP10Q86W26 655 aa16.16■□□□□ 0.18
SYNRG-225ENST00000619541 CREG2Q8IUH2 290 aa16.16■□□□□ 0.18
SYNRG-225ENST00000619541 OR2W6PQ8NHA6 318 aa16.16■□□□□ 0.18
SYNRG-225ENST00000619541 RBM12Q9NTZ6 932 aaKnown RBP16.16■□□□□ 0.18
SYNRG-225ENST00000619541 EIF4E1BA6NMX2 242 aaKnown RBP16.16■□□□□ 0.18
SYNRG-225ENST00000619541 BUB1BO60566 1050 aaPredicted RBP16.16■□□□□ 0.18
SYNRG-225ENST00000619541 PCCAP05165 728 aaPredicted RBP16.16■□□□□ 0.18
SYNRG-225ENST00000619541 TMOD1P28289 359 aa16.16■□□□□ 0.18
SYNRG-225ENST00000619541 MDH1P40925 334 aaKnown RBP16.16■□□□□ 0.18
SYNRG-225ENST00000619541 PPP1R7Q15435 360 aa16.16■□□□□ 0.18
SYNRG-225ENST00000619541 CPLX4Q7Z7G2 160 aa16.16■□□□□ 0.18
SYNRG-225ENST00000619541 IFT20Q8IY31 132 aa16.16■□□□□ 0.18
SYNRG-225ENST00000619541 TMEM87BQ96K49 555 aa16.16■□□□□ 0.18
SYNRG-225ENST00000619541 OSBPL9Q96SU4 736 aa16.16■□□□□ 0.18
SYNRG-225ENST00000619541 TPX2Q9ULW0 747 aaKnown RBP16.16■□□□□ 0.18
SYNRG-225ENST00000619541 MCM7P33993 719 aa16.16■□□□□ 0.18
SYNRG-225ENST00000619541 KLHL7Q8IXQ5 586 aa16.16■□□□□ 0.18
SYNRG-225ENST00000619541 ZBTB38Q8NAP3 1195 aaPredicted RBP16.16■□□□□ 0.18
SYNRG-225ENST00000619541 ALS2CR12Q96Q35 445 aa16.16■□□□□ 0.18
SYNRG-225ENST00000619541 RWDD2AQ9UIY3 292 aa16.16■□□□□ 0.18
SYNRG-225ENST00000619541 ZNF233A6NK53 670 aa16.15■□□□□ 0.18
SYNRG-225ENST00000619541 KCNQ2O43526 872 aa16.15■□□□□ 0.18
SYNRG-225ENST00000619541 WTAPQ15007 396 aa16.15■□□□□ 0.18
SYNRG-225ENST00000619541 PTPROQ16827 1216 aa16.15■□□□□ 0.18
SYNRG-225ENST00000619541 C2CD5Q86YS7 1000 aa16.15■□□□□ 0.18
SYNRG-225ENST00000619541 ZNF579Q8NAF0 562 aaKnown RBP16.15■□□□□ 0.18
SYNRG-225ENST00000619541 PROCA1Q8NCQ7 364 aaPredicted RBP16.15■□□□□ 0.18
SYNRG-225ENST00000619541 TRIM58Q8NG06 486 aa16.15■□□□□ 0.18
SYNRG-225ENST00000619541 CYFIP2Q96F07 1278 aa16.15■□□□□ 0.18
SYNRG-225ENST00000619541 FOXP1Q9H334 677 aaPredicted RBP16.15■□□□□ 0.18
SYNRG-225ENST00000619541 A1CFQ9NQ94 594 aaKnown RBP16.15■□□□□ 0.18
SYNRG-225ENST00000619541 HIBCHQ6NVY1 386 aaPredicted RBP16.15■□□□□ 0.18
SYNRG-225ENST00000619541 SPATA20Q8TB22 786 aa16.15■□□□□ 0.18
SYNRG-225ENST00000619541 IGDCC4Q8TDY8 1250 aa16.15■□□□□ 0.18
SYNRG-225ENST00000619541 TCP11Q8WWU5 503 aa16.15■□□□□ 0.18
SYNRG-225ENST00000619541 C21orf2O43822 256 aa16.15■□□□□ 0.18
SYNRG-225ENST00000619541 CLTAP09496 248 aa16.15■□□□□ 0.18
SYNRG-225ENST00000619541 XBP1P17861 261 aa16.15■□□□□ 0.18
SYNRG-225ENST00000619541 HAUS3Q68CZ6 603 aa16.15■□□□□ 0.18
SYNRG-225ENST00000619541 DZIP3Q86Y13 1208 aaKnown RBP16.15■□□□□ 0.18
SYNRG-225ENST00000619541 ELOA2Q8IYF1 753 aaPredicted RBP16.15■□□□□ 0.18
SYNRG-225ENST00000619541 RSRC1Q96IZ7 334 aaKnown RBP16.15■□□□□ 0.18
SYNRG-225ENST00000619541 COL22A1Q8NFW1 1626 aaPredicted RBP16.15■□□□□ 0.18
SYNRG-225ENST00000619541 DEXIO95424 95 aa16.14■□□□□ 0.18
SYNRG-225ENST00000619541 PTGDRQ13258 359 aa16.14■□□□□ 0.18
SYNRG-225ENST00000619541 EARS2Q5JPH6 523 aaKnown RBP16.14■□□□□ 0.18
SYNRG-225ENST00000619541 FUKQ8N0W3 1084 aa16.14■□□□□ 0.18
SYNRG-225ENST00000619541 KRT12Q99456 494 aa16.14■□□□□ 0.18
SYNRG-225ENST00000619541 GLI1P08151 1106 aa16.14■□□□□ 0.17
SYNRG-225ENST00000619541 IFNAR1P17181 557 aa16.14■□□□□ 0.17
SYNRG-225ENST00000619541 MYO1EQ12965 1108 aa16.14■□□□□ 0.17
SYNRG-225ENST00000619541 MMGT1Q8N4V1 131 aa16.14■□□□□ 0.17
SYNRG-225ENST00000619541 FAM207AQ9NSI2 230 aaPredicted RBP16.14■□□□□ 0.17
SYNRG-225ENST00000619541 AATFQ9NY61 560 aaKnown RBP eCLIP16.14■□□□□ 0.17
SYNRG-225ENST00000619541 HYOU1Q9Y4L1 999 aa16.14■□□□□ 0.17
SYNRG-225ENST00000619541 SLC4A4Q9Y6R1 1079 aa16.14■□□□□ 0.17
SYNRG-225ENST00000619541 LAMA4Q16363 1823 aa16.14■□□□□ 0.17
SYNRG-225ENST00000619541 TRADDQ15628 312 aa16.14■□□□□ 0.17
SYNRG-225ENST00000619541 SPDL1Q96EA4 605 aa16.14■□□□□ 0.17
SYNRG-225ENST00000619541 FAXDC2Q96IV6 333 aa16.14■□□□□ 0.17
SYNRG-225ENST00000619541 GREM2Q9H772 168 aa16.14■□□□□ 0.17
SYNRG-225ENST00000619541 PLAAQ9Y263 795 aa16.14■□□□□ 0.17
SYNRG-225ENST00000619541 SPATA31A5Q5VU36 1347 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms