RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 TCP11L1Q9NUJ3 509 aa13.22□□□□□ -0.29
C11orf54-215ENST00000617482 RNF216Q9NWF9 866 aaPredicted RBP13.22□□□□□ -0.29
C11orf54-215ENST00000617482 NARFQ9UHQ1 456 aa13.22□□□□□ -0.29
C11orf54-215ENST00000617482 ADAM21Q9UKJ8 722 aa13.22□□□□□ -0.29
C11orf54-215ENST00000617482 DLEC1Q9Y238 1755 aa13.22□□□□□ -0.29
C11orf54-215ENST00000617482 NRAPQ86VF7 1730 aa13.22□□□□□ -0.29
C11orf54-215ENST00000617482 SCN7AQ01118 1682 aa13.22□□□□□ -0.29
C11orf54-215ENST00000617482 CASZ1Q86V15 1759 aa13.22□□□□□ -0.29
C11orf54-215ENST00000617482 A0A1W2PQC6 194 aa13.22□□□□□ -0.29
C11orf54-215ENST00000617482 PALM3A6NDB9 673 aaPredicted RBP13.22□□□□□ -0.29
C11orf54-215ENST00000617482 GNPATO15228 680 aa13.22□□□□□ -0.29
C11orf54-215ENST00000617482 SRGAP2O75044 1071 aa13.22□□□□□ -0.29
C11orf54-215ENST00000617482 N4BP1O75113 896 aaKnown RBP13.22□□□□□ -0.29
C11orf54-215ENST00000617482 ERLIN1O75477 346 aa13.22□□□□□ -0.29
C11orf54-215ENST00000617482 TRIM21P19474 475 aaKnown RBP13.22□□□□□ -0.29
C11orf54-215ENST00000617482 TECP42680 631 aa13.22□□□□□ -0.29
C11orf54-215ENST00000617482 NAPAP54920 295 aa13.22□□□□□ -0.29
C11orf54-215ENST00000617482 HERVK_113P62684 666 aa13.22□□□□□ -0.29
C11orf54-215ENST00000617482 STK4Q13043 487 aa13.22□□□□□ -0.29
C11orf54-215ENST00000617482 ANKRD40Q6AI12 368 aa13.22□□□□□ -0.29
C11orf54-215ENST00000617482 HPS3Q969F9 1004 aa13.22□□□□□ -0.29
C11orf54-215ENST00000617482 PCMTD1Q96MG8 357 aaPredicted RBP13.22□□□□□ -0.29
C11orf54-215ENST00000617482 L1RE1Q9UN81 338 aa13.22□□□□□ -0.29
C11orf54-215ENST00000617482 NKRFO15226 690 aaKnown RBP eCLIP13.21□□□□□ -0.29
C11orf54-215ENST00000617482 FCER1AP12319 257 aa13.21□□□□□ -0.29
C11orf54-215ENST00000617482 DNM2P50570 870 aa13.21□□□□□ -0.29
C11orf54-215ENST00000617482 PDE4DQ08499 809 aa13.21□□□□□ -0.29
C11orf54-215ENST00000617482 TBC1D8BQ0IIM8 1120 aa13.21□□□□□ -0.29
C11orf54-215ENST00000617482 USP17L2Q6R6M4 530 aa13.21□□□□□ -0.29
C11orf54-215ENST00000617482 AMIGO3Q86WK7 504 aa13.21□□□□□ -0.29
C11orf54-215ENST00000617482 CALCOCO1Q9P1Z2 691 aa13.21□□□□□ -0.29
C11orf54-215ENST00000617482 RREB1Q92766 1687 aa13.21□□□□□ -0.29
C11orf54-215ENST00000617482 SMCO2A6NFE2 343 aa13.21□□□□□ -0.3
C11orf54-215ENST00000617482 RASSF10A6NK89 507 aa13.21□□□□□ -0.3
C11orf54-215ENST00000617482 BAG3O95817 575 aa13.21□□□□□ -0.3
C11orf54-215ENST00000617482 ATP1A1P05023 1023 aaKnown RBP13.21□□□□□ -0.3
C11orf54-215ENST00000617482 SRGNP10124 158 aa13.21□□□□□ -0.3
C11orf54-215ENST00000617482 RASA1P20936 1047 aa13.21□□□□□ -0.3
C11orf54-215ENST00000617482 ASIC1P78348 528 aa13.21□□□□□ -0.3
C11orf54-215ENST00000617482 NFIXQ14938 502 aa13.21□□□□□ -0.3
C11orf54-215ENST00000617482 GALNT17Q6IS24 598 aa13.21□□□□□ -0.3
C11orf54-215ENST00000617482 KIAA1328Q86T90 577 aa13.21□□□□□ -0.3
C11orf54-215ENST00000617482 DAGLBQ8NCG7 672 aa13.21□□□□□ -0.3
C11orf54-215ENST00000617482 EXOC1Q9NV70 894 aa13.21□□□□□ -0.3
C11orf54-215ENST00000617482 AHDC1Q5TGY3 1603 aaPredicted RBP13.21□□□□□ -0.3
C11orf54-215ENST00000617482 RCCD1A6NED2 376 aa13.2□□□□□ -0.3
C11orf54-215ENST00000617482 MYL1P05976 194 aa13.2□□□□□ -0.3
C11orf54-215ENST00000617482 TUBB4BP68371 445 aa13.2□□□□□ -0.3
C11orf54-215ENST00000617482 GPS2Q13227 327 aa13.2□□□□□ -0.3
C11orf54-215ENST00000617482 WDR66Q8TBY9 1149 aa13.2□□□□□ -0.3
C11orf54-215ENST00000617482 DHTKD1Q96HY7 919 aaPredicted RBP13.2□□□□□ -0.3
C11orf54-215ENST00000617482 CAPZA3Q96KX2 299 aa13.2□□□□□ -0.3
C11orf54-215ENST00000617482 TRIM9Q9C026 710 aa13.2□□□□□ -0.3
C11orf54-215ENST00000617482 HAUS4Q9H6D7 363 aa13.2□□□□□ -0.3
C11orf54-215ENST00000617482 VPS18Q9P253 973 aa13.2□□□□□ -0.3
C11orf54-215ENST00000617482 DUSP10Q9Y6W6 482 aa13.2□□□□□ -0.3
C11orf54-215ENST00000617482 FLT1P17948 1338 aa13.2□□□□□ -0.3
C11orf54-215ENST00000617482 LAD1O00515 517 aa13.2□□□□□ -0.3
C11orf54-215ENST00000617482 OR52Z1P0C646 297 aa13.2□□□□□ -0.3
C11orf54-215ENST00000617482 PRPHP41219 470 aa13.2□□□□□ -0.3
C11orf54-215ENST00000617482 MTIF2P46199 727 aaKnown RBP13.2□□□□□ -0.3
C11orf54-215ENST00000617482 BARGINQ6ZT62 677 aa13.2□□□□□ -0.3
C11orf54-215ENST00000617482 TRAPPC11Q7Z392 1133 aa13.2□□□□□ -0.3
C11orf54-215ENST00000617482 P2RX5Q93086 422 aa13.2□□□□□ -0.3
C11orf54-215ENST00000617482 CNOT6LQ96LI5 555 aaKnown RBP13.2□□□□□ -0.3
C11orf54-215ENST00000617482 TRERF1Q96PN7 1200 aa13.2□□□□□ -0.3
C11orf54-215ENST00000617482 LACRTQ9GZZ8 138 aa13.2□□□□□ -0.3
C11orf54-215ENST00000617482 ZMYND12Q9H0C1 365 aa13.2□□□□□ -0.3
C11orf54-215ENST00000617482 NHEJ1Q9H9Q4 299 aaPredicted RBP13.2□□□□□ -0.3
C11orf54-215ENST00000617482 IRS2Q9Y4H2 1338 aa13.19□□□□□ -0.3
C11orf54-215ENST00000617482 PSMD14O00487 310 aa13.19□□□□□ -0.3
C11orf54-215ENST00000617482 RPS6KA4O75676 772 aa13.19□□□□□ -0.3
C11orf54-215ENST00000617482 LMAN1P49257 510 aa13.19□□□□□ -0.3
C11orf54-215ENST00000617482 CYP27A1Q02318 531 aa13.19□□□□□ -0.3
C11orf54-215ENST00000617482 CASP8Q14790 479 aa13.19□□□□□ -0.3
C11orf54-215ENST00000617482 NONOQ15233 471 aaKnown RBP eCLIP13.19□□□□□ -0.3
C11orf54-215ENST00000617482 TXLNBQ8N3L3 684 aa13.19□□□□□ -0.3
C11orf54-215ENST00000617482 MMS19Q96T76 1030 aa13.19□□□□□ -0.3
C11orf54-215ENST00000617482 EYA3Q99504 573 aa13.19□□□□□ -0.3
C11orf54-215ENST00000617482 NOC4LQ9BVI4 516 aaKnown RBP13.19□□□□□ -0.3
C11orf54-215ENST00000617482 ZNHIT6Q9NWK9 470 aaKnown RBP13.19□□□□□ -0.3
C11orf54-215ENST00000617482 BIN2Q9UBW5 565 aaPredicted RBP13.19□□□□□ -0.3
C11orf54-215ENST00000617482 SAR1BQ9Y6B6 198 aa13.19□□□□□ -0.3
C11orf54-215ENST00000617482 CNTNAP4Q9C0A0 1308 aa13.19□□□□□ -0.3
C11orf54-215ENST00000617482 CCNE1P24864 410 aa13.19□□□□□ -0.3
C11orf54-215ENST00000617482 KRT83P78385 493 aa13.19□□□□□ -0.3
C11orf54-215ENST00000617482 TBCKQ8TEA7 893 aa13.19□□□□□ -0.3
C11orf54-215ENST00000617482 ARHGEF1Q92888 912 aaKnown RBP13.19□□□□□ -0.3
C11orf54-215ENST00000617482 JAKMIP2Q96AA8 810 aa13.19□□□□□ -0.3
C11orf54-215ENST00000617482 TTYH3Q9C0H2 523 aa13.19□□□□□ -0.3
C11orf54-215ENST00000617482 UBA5Q9GZZ9 404 aa13.19□□□□□ -0.3
C11orf54-215ENST00000617482 COL5A3P25940 1745 aaPredicted RBP13.18□□□□□ -0.3
C11orf54-215ENST00000617482 KIAA1551Q9HCM1 1747 aa13.18□□□□□ -0.3
C11orf54-215ENST00000617482 PHACTR2O75167 634 aa13.18□□□□□ -0.3
C11orf54-215ENST00000617482 TXKP42681 527 aa13.18□□□□□ -0.3
C11orf54-215ENST00000617482 CDK8P49336 464 aa13.18□□□□□ -0.3
C11orf54-215ENST00000617482 GSTO1P78417 241 aa13.18□□□□□ -0.3
C11orf54-215ENST00000617482 MEA1Q16626 185 aa13.18□□□□□ -0.3
C11orf54-215ENST00000617482 KRT25Q7Z3Z0 450 aa13.18□□□□□ -0.3
C11orf54-215ENST00000617482 NOC3LQ8WTT2 800 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms