RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 MAPKAPK5Q8IW41 473 aa5□□□□□ -1.61
CHD9-221ENST00000615216 IFNL3Q8IZI9 196 aa5□□□□□ -1.61
CHD9-221ENST00000615216 STAP2Q9UGK3 403 aa5□□□□□ -1.61
CHD9-221ENST00000615216 KIAA1210Q9ULL0 1709 aa5□□□□□ -1.61
CHD9-221ENST00000615216 WDR17Q8IZU2 1322 aa5□□□□□ -1.61
CHD9-221ENST00000615216 FMNL1O95466 1100 aaPredicted RBP5□□□□□ -1.61
CHD9-221ENST00000615216 CD19P15391 556 aa5□□□□□ -1.61
CHD9-221ENST00000615216 PDE6AP16499 860 aa5□□□□□ -1.61
CHD9-221ENST00000615216 CYP2J2P51589 502 aa5□□□□□ -1.61
CHD9-221ENST00000615216 ZSCAN26Q16670 478 aa5□□□□□ -1.61
CHD9-221ENST00000615216 TMC4Q7Z404 712 aa5□□□□□ -1.61
CHD9-221ENST00000615216 FANCBQ8NB91 859 aa5□□□□□ -1.61
CHD9-221ENST00000615216 MYL10Q9BUA6 226 aa5□□□□□ -1.61
CHD9-221ENST00000615216 MAGI2Q86UL8 1455 aa5□□□□□ -1.61
CHD9-221ENST00000615216 RPAP1Q9BWH6 1393 aaPredicted RBP5□□□□□ -1.61
CHD9-221ENST00000615216 PCCAP05165 728 aaPredicted RBP5□□□□□ -1.61
CHD9-221ENST00000615216 ARMC9Q7Z3E5 817 aa5□□□□□ -1.61
CHD9-221ENST00000615216 LARGE2Q8N3Y3 721 aa5□□□□□ -1.61
CHD9-221ENST00000615216 TRIM56Q9BRZ2 755 aaKnown RBP5□□□□□ -1.61
CHD9-221ENST00000615216 MED10Q9BTT4 135 aa5□□□□□ -1.61
CHD9-221ENST00000615216 IKBKBO14920 756 aa5□□□□□ -1.61
CHD9-221ENST00000615216 HSPA8P11142 646 aaKnown RBP5□□□□□ -1.61
CHD9-221ENST00000615216 YARSP54577 528 aaKnown RBP5□□□□□ -1.61
CHD9-221ENST00000615216 TFDP1Q14186 410 aa5□□□□□ -1.61
CHD9-221ENST00000615216 NELFCDQ8IXH7 590 aa5□□□□□ -1.61
CHD9-221ENST00000615216 TRMT44Q8IYL2 757 aaKnown RBP5□□□□□ -1.61
CHD9-221ENST00000615216 GBP7Q8N8V2 638 aaPredicted RBP5□□□□□ -1.61
CHD9-221ENST00000615216 SPC25Q9HBM1 224 aa5□□□□□ -1.61
CHD9-221ENST00000615216 GJA3Q9Y6H8 435 aa5□□□□□ -1.61
CHD9-221ENST00000615216 SETBP1Q9Y6X0 1596 aa5□□□□□ -1.61
CHD9-221ENST00000615216 YEATS2Q9ULM3 1422 aa4.99□□□□□ -1.61
CHD9-221ENST00000615216 A0A0D9SFI3 127 aa4.99□□□□□ -1.61
CHD9-221ENST00000615216 PLEKHG3A1L390 1219 aa4.99□□□□□ -1.61
CHD9-221ENST00000615216 TAF5LO75529 589 aa4.99□□□□□ -1.61
CHD9-221ENST00000615216 CFBP00751 764 aa4.99□□□□□ -1.61
CHD9-221ENST00000615216 GNGT1P63211 74 aa4.99□□□□□ -1.61
CHD9-221ENST00000615216 ARHGAP4P98171 946 aa4.99□□□□□ -1.61
CHD9-221ENST00000615216 RPS6KA2Q15349 733 aa4.99□□□□□ -1.61
CHD9-221ENST00000615216 SNCBQ16143 134 aa4.99□□□□□ -1.61
CHD9-221ENST00000615216 MFSD14BQ5SR56 506 aa4.99□□□□□ -1.61
CHD9-221ENST00000615216 TMED8Q6PL24 325 aaPredicted RBP4.99□□□□□ -1.61
CHD9-221ENST00000615216 FAM178BQ8IXR5 827 aa4.99□□□□□ -1.61
CHD9-221ENST00000615216 CDKL2Q92772 493 aa4.99□□□□□ -1.61
CHD9-221ENST00000615216 SDCCAG3Q96C92 435 aa4.99□□□□□ -1.61
CHD9-221ENST00000615216 GSDMAQ96QA5 445 aa4.99□□□□□ -1.61
CHD9-221ENST00000615216 BCL2L12Q9HB09 334 aa4.99□□□□□ -1.61
CHD9-221ENST00000615216 PCDHA12Q9UN75 941 aa4.99□□□□□ -1.61
CHD9-221ENST00000615216 SPATA31E1Q6ZUB1 1445 aa4.99□□□□□ -1.61
CHD9-221ENST00000615216 HIP1RO75146 1068 aa4.99□□□□□ -1.61
CHD9-221ENST00000615216 S100BP04271 92 aaPredicted RBP4.99□□□□□ -1.61
CHD9-221ENST00000615216 HSPD1P10809 573 aaKnown RBP4.99□□□□□ -1.61
CHD9-221ENST00000615216 GUCY2FP51841 1108 aa4.99□□□□□ -1.61
CHD9-221ENST00000615216 ASPHQ12797 758 aa4.99□□□□□ -1.61
CHD9-221ENST00000615216 UBE3CQ15386 1083 aa4.99□□□□□ -1.61
CHD9-221ENST00000615216 MRRFQ96E11 262 aaKnown RBP4.99□□□□□ -1.61
CHD9-221ENST00000615216 TMEM63CQ9P1W3 806 aa4.99□□□□□ -1.61
CHD9-221ENST00000615216 RNF14Q9UBS8 474 aa4.99□□□□□ -1.61
CHD9-221ENST00000615216 MTMR6Q9Y217 621 aa4.99□□□□□ -1.61
CHD9-221ENST00000615216 NOC2LQ9Y3T9 749 aaKnown RBP4.99□□□□□ -1.61
CHD9-221ENST00000615216 GCFC2P16383 781 aaKnown RBP4.99□□□□□ -1.61
CHD9-221ENST00000615216 MFAP3P55082 362 aa4.99□□□□□ -1.61
CHD9-221ENST00000615216 ARHGAP44Q17R89 818 aa4.99□□□□□ -1.61
CHD9-221ENST00000615216 PNMA8AQ86V59 439 aaPredicted RBP4.99□□□□□ -1.61
CHD9-221ENST00000615216 TDRD7Q8NHU6 1098 aaKnown RBP4.99□□□□□ -1.61
CHD9-221ENST00000615216 PPP1R13BQ96KQ4 1090 aa4.99□□□□□ -1.61
CHD9-221ENST00000615216 USP40Q9NVE5 1235 aa4.99□□□□□ -1.61
CHD9-221ENST00000615216 ATP8B3O60423 1300 aa4.99□□□□□ -1.61
CHD9-221ENST00000615216 MAP2P11137 1827 aaKnown RBP4.99□□□□□ -1.61
CHD9-221ENST00000615216 PTCH1Q13635 1447 aa4.99□□□□□ -1.61
CHD9-221ENST00000615216 ZC3H13Q5T200 1668 aaKnown RBP4.99□□□□□ -1.61
CHD9-221ENST00000615216 SUN1O94901 812 aa4.99□□□□□ -1.61
CHD9-221ENST00000615216 COPB1P53618 953 aaKnown RBP4.99□□□□□ -1.61
CHD9-221ENST00000615216 IL9RQ01113 521 aa4.99□□□□□ -1.61
CHD9-221ENST00000615216 ALCAMQ13740 583 aa4.99□□□□□ -1.61
CHD9-221ENST00000615216 RSPH3Q86UC2 560 aa4.99□□□□□ -1.61
CHD9-221ENST00000615216 ZC3H15Q8WU90 426 aaKnown RBP4.99□□□□□ -1.61
CHD9-221ENST00000615216 SYMPKQ92797 1274 aaKnown RBP4.99□□□□□ -1.61
CHD9-221ENST00000615216 ADPGKQ9BRR6 497 aa4.99□□□□□ -1.61
CHD9-221ENST00000615216 EPS15L1Q9UBC2 864 aa4.99□□□□□ -1.61
CHD9-221ENST00000615216 PCDHA4Q9UN74 947 aa4.99□□□□□ -1.61
CHD9-221ENST00000615216 JRKLQ9Y4A0 524 aa4.99□□□□□ -1.61
CHD9-221ENST00000615216 A2ML1A8K2U0 1454 aa4.99□□□□□ -1.61
CHD9-221ENST00000615216 HSPA6P17066 643 aa4.99□□□□□ -1.61
CHD9-221ENST00000615216 DLGAP5Q15398 846 aa4.99□□□□□ -1.61
CHD9-221ENST00000615216 MGARPQ8TDB4 240 aa4.99□□□□□ -1.61
CHD9-221ENST00000615216 RRAGDQ9NQL2 400 aaPredicted RBP4.99□□□□□ -1.61
CHD9-221ENST00000615216 AFG3L2Q9Y4W6 797 aa4.99□□□□□ -1.61
CHD9-221ENST00000615216 MADDQ8WXG6 1647 aa4.99□□□□□ -1.61
CHD9-221ENST00000615216 PRDM1O75626 825 aa4.99□□□□□ -1.61
CHD9-221ENST00000615216 TECP42680 631 aa4.99□□□□□ -1.61
CHD9-221ENST00000615216 PRR16Q569H4 304 aa4.99□□□□□ -1.61
CHD9-221ENST00000615216 KLHDC4Q8TBB5 520 aa4.99□□□□□ -1.61
CHD9-221ENST00000615216 TUBB6Q9BUF5 446 aa4.99□□□□□ -1.61
CHD9-221ENST00000615216 RNF26Q9BY78 433 aaPredicted RBP4.99□□□□□ -1.61
CHD9-221ENST00000615216 PPP1R12CQ9BZL4 782 aa4.99□□□□□ -1.61
CHD9-221ENST00000615216 LSG1Q9H089 658 aaKnown RBP4.99□□□□□ -1.61
CHD9-221ENST00000615216 CPSF1Q10570 1443 aaKnown RBP4.99□□□□□ -1.61
CHD9-221ENST00000615216 MAP3K15Q6ZN16 1313 aa4.99□□□□□ -1.61
CHD9-221ENST00000615216 OATP04181 439 aa4.99□□□□□ -1.61
CHD9-221ENST00000615216 GSPT1P15170 499 aaKnown RBP4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms