RNA–Protein interactions for RNA: ENST00000600442.5

ZNF548-210, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-210ENST00000600442 SHROOM1Q2M3G4 852 aaPredicted RBP14.56□□□□□ -0.08
ZNF548-210ENST00000600442 LDLRAD1Q5T700 205 aa14.56□□□□□ -0.08
ZNF548-210ENST00000600442 SPRYD7Q5W111 196 aa14.56□□□□□ -0.08
ZNF548-210ENST00000600442 ANKRD13AQ8IZ07 590 aa14.56□□□□□ -0.08
ZNF548-210ENST00000600442 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.56□□□□□ -0.08
ZNF548-210ENST00000600442 CENPFP49454 3210 aa14.56□□□□□ -0.08
ZNF548-210ENST00000600442 SIPA1L1O43166 1804 aa14.55□□□□□ -0.08
ZNF548-210ENST00000600442 GREB1LQ9C091 1923 aaPredicted RBP14.55□□□□□ -0.08
ZNF548-210ENST00000600442 A0A1W2PQ27 194 aa14.55□□□□□ -0.08
ZNF548-210ENST00000600442 A0A1W2PQ64 194 aa14.55□□□□□ -0.08
ZNF548-210ENST00000600442 A0A1W2PQD8 194 aa14.55□□□□□ -0.08
ZNF548-210ENST00000600442 ZBED4O75132 1171 aa14.55□□□□□ -0.08
ZNF548-210ENST00000600442 QRICH1Q2TAL8 776 aa14.55□□□□□ -0.08
ZNF548-210ENST00000600442 ADALQ6DHV7 355 aa14.55□□□□□ -0.08
ZNF548-210ENST00000600442 PIK3AP1Q6ZUJ8 805 aa14.55□□□□□ -0.08
ZNF548-210ENST00000600442 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.55□□□□□ -0.08
ZNF548-210ENST00000600442 ZKSCAN4Q969J2 545 aaPredicted RBP14.55□□□□□ -0.08
ZNF548-210ENST00000600442 KIFC2Q96AC6 838 aa14.55□□□□□ -0.08
ZNF548-210ENST00000600442 NUP88Q99567 741 aaPredicted RBP14.55□□□□□ -0.08
ZNF548-210ENST00000600442 TANGO6Q9C0B7 1094 aa14.55□□□□□ -0.08
ZNF548-210ENST00000600442 CPVLQ9H3G5 476 aa14.55□□□□□ -0.08
ZNF548-210ENST00000600442 EHMT1Q9H9B1 1298 aa14.55□□□□□ -0.08
ZNF548-210ENST00000600442 RIC8AQ9NPQ8 531 aa14.55□□□□□ -0.08
ZNF548-210ENST00000600442 DDX19AQ9NUU7 478 aaKnown RBP14.55□□□□□ -0.08
ZNF548-210ENST00000600442 PRR12Q9ULL5 1215 aa14.55□□□□□ -0.08
ZNF548-210ENST00000600442 FZD1Q9UP38 647 aa14.55□□□□□ -0.08
ZNF548-210ENST00000600442 MRPL11Q9Y3B7 192 aaKnown RBP14.55□□□□□ -0.08
ZNF548-210ENST00000600442 CLIC4Q9Y696 253 aa14.55□□□□□ -0.08
ZNF548-210ENST00000600442 MORC2Q9Y6X9 1032 aaPredicted RBP14.55□□□□□ -0.08
ZNF548-210ENST00000600442 MKI67P46013 3256 aaKnown RBP14.54□□□□□ -0.08
ZNF548-210ENST00000600442 LAD1O00515 517 aa14.54□□□□□ -0.08
ZNF548-210ENST00000600442 CUTAO60888 179 aa14.54□□□□□ -0.08
ZNF548-210ENST00000600442 USP2O75604 605 aaPredicted RBP14.54□□□□□ -0.08
ZNF548-210ENST00000600442 FOSP01100 380 aaPredicted RBP14.54□□□□□ -0.08
ZNF548-210ENST00000600442 ATP2B1P20020 1258 aa14.54□□□□□ -0.08
ZNF548-210ENST00000600442 MTMR2Q13614 643 aa14.54□□□□□ -0.08
ZNF548-210ENST00000600442 TTC38Q5R3I4 469 aa14.54□□□□□ -0.08
ZNF548-210ENST00000600442 CCDC183Q5T5S1 534 aa14.54□□□□□ -0.08
ZNF548-210ENST00000600442 CAVIN1Q6NZI2 390 aaKnown RBP14.54□□□□□ -0.08
ZNF548-210ENST00000600442 KRI1Q8N9T8 703 aaKnown RBP14.54□□□□□ -0.08
ZNF548-210ENST00000600442 OXER1Q8TDS5 423 aa14.54□□□□□ -0.08
ZNF548-210ENST00000600442 FERMT2Q96AC1 680 aa14.54□□□□□ -0.08
ZNF548-210ENST00000600442 SLC10A4Q96EP9 437 aa14.54□□□□□ -0.08
ZNF548-210ENST00000600442 SLF1Q9BQI6 1058 aa14.54□□□□□ -0.08
ZNF548-210ENST00000600442 FAM13BQ9NYF5 915 aa14.54□□□□□ -0.08
ZNF548-210ENST00000600442 KINO60870 393 aaKnown RBP14.53□□□□□ -0.08
ZNF548-210ENST00000600442 ALDH1A1P00352 501 aa14.53□□□□□ -0.08
ZNF548-210ENST00000600442 INHBEP58166 350 aa14.53□□□□□ -0.08
ZNF548-210ENST00000600442 PPATQ06203 517 aa14.53□□□□□ -0.08
ZNF548-210ENST00000600442 AP3B2Q13367 1082 aa14.53□□□□□ -0.08
ZNF548-210ENST00000600442 SLC35G1Q2M3R5 365 aa14.53□□□□□ -0.08
ZNF548-210ENST00000600442 ERO1BQ86YB8 467 aa14.53□□□□□ -0.08
ZNF548-210ENST00000600442 MRPS27Q92552 414 aaKnown RBP14.53□□□□□ -0.08
ZNF548-210ENST00000600442 COA7Q96BR5 231 aa14.53□□□□□ -0.08
ZNF548-210ENST00000600442 CHAMP1Q96JM3 812 aa14.53□□□□□ -0.08
ZNF548-210ENST00000600442 C12orf42Q96LP6 360 aa14.53□□□□□ -0.08
ZNF548-210ENST00000600442 PYM1Q9BRP8 204 aaKnown RBP14.53□□□□□ -0.08
ZNF548-210ENST00000600442 GZF1Q9H116 711 aaPredicted RBP14.53□□□□□ -0.08
ZNF548-210ENST00000600442 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.53□□□□□ -0.08
ZNF548-210ENST00000600442 HOOK1Q9UJC3 728 aaKnown RBP14.53□□□□□ -0.08
ZNF548-210ENST00000600442 PCDHA6Q9UN73 950 aa14.53□□□□□ -0.08
ZNF548-210ENST00000600442 PCDHA8Q9Y5H6 950 aa14.53□□□□□ -0.08
ZNF548-210ENST00000600442 HTTP42858 3142 aa14.53□□□□□ -0.08
ZNF548-210ENST00000600442 ABCB11O95342 1321 aa14.52□□□□□ -0.08
ZNF548-210ENST00000600442 MANSC4A6NHS7 340 aaPredicted RBP14.52□□□□□ -0.09
ZNF548-210ENST00000600442 SPDYE3A6NKU9 549 aa14.52□□□□□ -0.09
ZNF548-210ENST00000600442 CTAGE5O15320 804 aa14.52□□□□□ -0.09
ZNF548-210ENST00000600442 GADD45BO75293 160 aaPredicted RBP14.52□□□□□ -0.09
ZNF548-210ENST00000600442 FLOT1O75955 427 aa14.52□□□□□ -0.09
ZNF548-210ENST00000600442 PABPC4Q13310 644 aaKnown RBP eCLIP14.52□□□□□ -0.09
ZNF548-210ENST00000600442 RASGRP2Q7LDG7 609 aa14.52□□□□□ -0.09
ZNF548-210ENST00000600442 NEK8Q86SG6 692 aa14.52□□□□□ -0.09
ZNF548-210ENST00000600442 MCF2L2Q86YR7 1114 aa14.52□□□□□ -0.09
ZNF548-210ENST00000600442 IFNL1Q8IU54 200 aa14.52□□□□□ -0.09
ZNF548-210ENST00000600442 CCAR1Q8IX12 1150 aaKnown RBP14.52□□□□□ -0.09
ZNF548-210ENST00000600442 SAMD3Q8N6K7 520 aa14.52□□□□□ -0.09
ZNF548-210ENST00000600442 GPT2Q8TD30 523 aa14.52□□□□□ -0.09
ZNF548-210ENST00000600442 TNFRSF25Q93038 417 aa14.52□□□□□ -0.09
ZNF548-210ENST00000600442 RANBP17Q9H2T7 1088 aaKnown RBP14.52□□□□□ -0.09
ZNF548-210ENST00000600442 HOXC10Q9NYD6 342 aa14.52□□□□□ -0.09
ZNF548-210ENST00000600442 TRIM17Q9Y577 477 aa14.52□□□□□ -0.09
ZNF548-210ENST00000600442 USP17L15C9J2P7 530 aa14.51□□□□□ -0.09
ZNF548-210ENST00000600442 USP17L13C9JLJ4 530 aa14.51□□□□□ -0.09
ZNF548-210ENST00000600442 USP17L11C9JVI0 530 aa14.51□□□□□ -0.09
ZNF548-210ENST00000600442 USP17L18D6R9N7 530 aa14.51□□□□□ -0.09
ZNF548-210ENST00000600442 USP17L22D6RA61 530 aa14.51□□□□□ -0.09
ZNF548-210ENST00000600442 USP17L17D6RBQ6 530 aa14.51□□□□□ -0.09
ZNF548-210ENST00000600442 USP17L19D6RCP7 530 aa14.51□□□□□ -0.09
ZNF548-210ENST00000600442 USP17L20D6RJB6 530 aa14.51□□□□□ -0.09
ZNF548-210ENST00000600442 CXCL11O14625 94 aa14.51□□□□□ -0.09
ZNF548-210ENST00000600442 GCFC2P16383 781 aaKnown RBP14.51□□□□□ -0.09
ZNF548-210ENST00000600442 VCAM1P19320 739 aa14.51□□□□□ -0.09
ZNF548-210ENST00000600442 CMA1P23946 247 aa14.51□□□□□ -0.09
ZNF548-210ENST00000600442 TXLNAP40222 546 aa14.51□□□□□ -0.09
ZNF548-210ENST00000600442 USP17L24Q0WX57 530 aa14.51□□□□□ -0.09
ZNF548-210ENST00000600442 VGLL4Q14135 290 aa14.51□□□□□ -0.09
ZNF548-210ENST00000600442 GSE1Q14687 1217 aa14.51□□□□□ -0.09
ZNF548-210ENST00000600442 NPY5RQ15761 445 aa14.51□□□□□ -0.09
ZNF548-210ENST00000600442 MAP3K11Q16584 847 aa14.51□□□□□ -0.09
ZNF548-210ENST00000600442 TPRNQ4KMQ1 711 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms