RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 PRR33A8MZF0 331 aa16.51■□□□□ 0.23
SHKBP1-208ENST00000595726 RBAK-RBAKDNI3L0D1 243 aa16.51■□□□□ 0.23
SHKBP1-208ENST00000595726 ATP2A1O14983 1001 aa16.51■□□□□ 0.23
SHKBP1-208ENST00000595726 NDUFB10O96000 172 aa16.51■□□□□ 0.23
SHKBP1-208ENST00000595726 TTF1Q15361 905 aaPredicted RBP16.51■□□□□ 0.23
SHKBP1-208ENST00000595726 IL1RAPL2Q9NP60 686 aa16.51■□□□□ 0.23
SHKBP1-208ENST00000595726 ATP8A2Q9NTI2 1148 aa16.51■□□□□ 0.23
SHKBP1-208ENST00000595726 EXOC6BQ9Y2D4 811 aa16.51■□□□□ 0.23
SHKBP1-208ENST00000595726 CTDP1Q9Y5B0 961 aaPredicted RBP16.51■□□□□ 0.23
SHKBP1-208ENST00000595726 USP34Q70CQ2 3546 aa16.5■□□□□ 0.23
SHKBP1-208ENST00000595726 NHLH1Q02575 133 aa16.5■□□□□ 0.23
SHKBP1-208ENST00000595726 EEPD1Q7L9B9 569 aa16.5■□□□□ 0.23
SHKBP1-208ENST00000595726 TMCO2Q7Z6W1 182 aaPredicted RBP16.5■□□□□ 0.23
SHKBP1-208ENST00000595726 HERC6Q8IVU3 1022 aa16.5■□□□□ 0.23
SHKBP1-208ENST00000595726 GJD3Q8N144 294 aa16.5■□□□□ 0.23
SHKBP1-208ENST00000595726 BCL11AQ9H165 835 aa16.5■□□□□ 0.23
SHKBP1-208ENST00000595726 SLC38A10Q9HBR0 1119 aa16.5■□□□□ 0.23
SHKBP1-208ENST00000595726 MYH8P13535 1937 aa16.49■□□□□ 0.23
SHKBP1-208ENST00000595726 LCHNA4D1U4 455 aa16.49■□□□□ 0.23
SHKBP1-208ENST00000595726 RLBP1P12271 317 aa16.49■□□□□ 0.23
SHKBP1-208ENST00000595726 CTR9Q6PD62 1173 aa16.49■□□□□ 0.23
SHKBP1-208ENST00000595726 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.49■□□□□ 0.23
SHKBP1-208ENST00000595726 FAM178BQ8IXR5 827 aa16.49■□□□□ 0.23
SHKBP1-208ENST00000595726 FTSJ3Q8IY81 847 aaKnown RBP16.49■□□□□ 0.23
SHKBP1-208ENST00000595726 FAM133AQ8N9E0 248 aa16.49■□□□□ 0.23
SHKBP1-208ENST00000595726 CHST13Q8NET6 341 aa16.49■□□□□ 0.23
SHKBP1-208ENST00000595726 GDPD5Q8WTR4 605 aa16.49■□□□□ 0.23
SHKBP1-208ENST00000595726 BAZ2AQ9UIF9 1905 aaKnown RBP16.49■□□□□ 0.23
SHKBP1-208ENST00000595726 TNKSO95271 1327 aa16.48■□□□□ 0.23
SHKBP1-208ENST00000595726 CFAP54Q96N23 3096 aa16.48■□□□□ 0.23
SHKBP1-208ENST00000595726 C5orf42Q9H799 3197 aa16.48■□□□□ 0.23
SHKBP1-208ENST00000595726 ZEB2O60315 1214 aa16.48■□□□□ 0.23
SHKBP1-208ENST00000595726 PFKMP08237 780 aa16.48■□□□□ 0.23
SHKBP1-208ENST00000595726 ACTN1P12814 892 aa16.48■□□□□ 0.23
SHKBP1-208ENST00000595726 TAPT1Q6NXT6 567 aa16.48■□□□□ 0.23
SHKBP1-208ENST00000595726 PHOSPHO2Q8TCD6 241 aa16.48■□□□□ 0.23
SHKBP1-208ENST00000595726 SLC9A7Q96T83 725 aa16.48■□□□□ 0.23
SHKBP1-208ENST00000595726 FTOQ9C0B1 505 aaKnown RBP eCLIP16.48■□□□□ 0.23
SHKBP1-208ENST00000595726 CLIP2Q9UDT6 1046 aa16.48■□□□□ 0.23
SHKBP1-208ENST00000595726 FBXO40Q9UH90 709 aa16.48■□□□□ 0.23
SHKBP1-208ENST00000595726 SCN5AQ14524 2016 aa16.48■□□□□ 0.23
SHKBP1-208ENST00000595726 KIF28PB7ZC32 967 aa16.47■□□□□ 0.23
SHKBP1-208ENST00000595726 SSTR3P32745 418 aaPredicted RBP16.47■□□□□ 0.23
SHKBP1-208ENST00000595726 FBXO16Q8IX29 292 aaPredicted RBP16.47■□□□□ 0.23
SHKBP1-208ENST00000595726 AMOTL1Q8IY63 956 aa16.47■□□□□ 0.23
SHKBP1-208ENST00000595726 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.47■□□□□ 0.23
SHKBP1-208ENST00000595726 ANKS1AQ92625 1134 aa16.47■□□□□ 0.23
SHKBP1-208ENST00000595726 CHMP4CQ96CF2 233 aa16.47■□□□□ 0.23
SHKBP1-208ENST00000595726 FBXL18Q96ME1 805 aa16.47■□□□□ 0.23
SHKBP1-208ENST00000595726 PURBQ96QR8 312 aaKnown RBP16.47■□□□□ 0.23
SHKBP1-208ENST00000595726 UBE2ZQ9H832 354 aaPredicted RBP16.47■□□□□ 0.23
SHKBP1-208ENST00000595726 A1CFQ9NQ94 594 aaKnown RBP16.47■□□□□ 0.23
SHKBP1-208ENST00000595726 MTUS1Q9ULD2 1270 aa16.47■□□□□ 0.23
SHKBP1-208ENST00000595726 SUPT20HL2P0C7V6 817 aa16.46■□□□□ 0.23
SHKBP1-208ENST00000595726 IL9P15248 144 aa16.46■□□□□ 0.23
SHKBP1-208ENST00000595726 RASA1P20936 1047 aa16.46■□□□□ 0.23
SHKBP1-208ENST00000595726 ADD2P35612 726 aa16.46■□□□□ 0.23
SHKBP1-208ENST00000595726 ITPRIPQ8IWB1 547 aa16.46■□□□□ 0.23
SHKBP1-208ENST00000595726 SEZ6LQ9BYH1 1024 aa16.46■□□□□ 0.23
SHKBP1-208ENST00000595726 NYAP2Q9P242 653 aa16.46■□□□□ 0.23
SHKBP1-208ENST00000595726 SLC4A4Q9Y6R1 1079 aa16.46■□□□□ 0.23
SHKBP1-208ENST00000595726 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.45■□□□□ 0.22
SHKBP1-208ENST00000595726 ASB14A6NK59 587 aa16.45■□□□□ 0.22
SHKBP1-208ENST00000595726 IQCF3P0C7M6 154 aa16.45■□□□□ 0.22
SHKBP1-208ENST00000595726 KCNA5P22460 613 aa16.45■□□□□ 0.22
SHKBP1-208ENST00000595726 CSPP1Q1MSJ5 1256 aa16.45■□□□□ 0.22
SHKBP1-208ENST00000595726 IQSEC1Q6DN90 963 aa16.45■□□□□ 0.22
SHKBP1-208ENST00000595726 KIAA1211Q6ZU35 1233 aa16.45■□□□□ 0.22
SHKBP1-208ENST00000595726 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.45■□□□□ 0.22
SHKBP1-208ENST00000595726 COG6Q9Y2V7 657 aa16.45■□□□□ 0.22
SHKBP1-208ENST00000595726 MYL3P08590 195 aa16.44■□□□□ 0.22
SHKBP1-208ENST00000595726 SNAP25P60880 206 aa16.44■□□□□ 0.22
SHKBP1-208ENST00000595726 FAM47CQ5HY64 1035 aa16.44■□□□□ 0.22
SHKBP1-208ENST00000595726 ACAD9Q9H845 621 aa16.44■□□□□ 0.22
SHKBP1-208ENST00000595726 SUGCTQ9HAC7 445 aa16.44■□□□□ 0.22
SHKBP1-208ENST00000595726 RNF146Q9NTX7 359 aa16.44■□□□□ 0.22
SHKBP1-208ENST00000595726 FEM1BQ9UK73 627 aa16.44■□□□□ 0.22
SHKBP1-208ENST00000595726 ALADP13716 330 aa16.43■□□□□ 0.22
SHKBP1-208ENST00000595726 OAZ1P54368 228 aa16.43■□□□□ 0.22
SHKBP1-208ENST00000595726 PURAQ00577 322 aaKnown RBP16.43■□□□□ 0.22
SHKBP1-208ENST00000595726 NBPF20Q3BBV1 942 aa16.43■□□□□ 0.22
SHKBP1-208ENST00000595726 LEXMQ3ZCV2 418 aa16.43■□□□□ 0.22
SHKBP1-208ENST00000595726 LRRC47Q8N1G4 583 aaKnown RBP16.43■□□□□ 0.22
SHKBP1-208ENST00000595726 RETREG2Q8NC44 543 aa16.43■□□□□ 0.22
SHKBP1-208ENST00000595726 DDRGK1Q96HY6 314 aa16.43■□□□□ 0.22
SHKBP1-208ENST00000595726 BOLA2Q9H3K6 86 aa16.43■□□□□ 0.22
SHKBP1-208ENST00000595726 MKNK2Q9HBH9 465 aa16.43■□□□□ 0.22
SHKBP1-208ENST00000595726 Q9Y3F1 56 aa16.43■□□□□ 0.22
SHKBP1-208ENST00000595726 ZNF536O15090 1300 aa16.43■□□□□ 0.22
SHKBP1-208ENST00000595726 TET1Q8NFU7 2136 aa16.42■□□□□ 0.22
SHKBP1-208ENST00000595726 RFC2P35250 354 aa16.42■□□□□ 0.22
SHKBP1-208ENST00000595726 MUM1L1Q5H9M0 696 aa16.42■□□□□ 0.22
SHKBP1-208ENST00000595726 PTCRAQ6ISU1 281 aaPredicted RBP16.42■□□□□ 0.22
SHKBP1-208ENST00000595726 CEP85Q6P2H3 762 aa16.42■□□□□ 0.22
SHKBP1-208ENST00000595726 ERC1Q8IUD2 1116 aa16.42■□□□□ 0.22
SHKBP1-208ENST00000595726 RHPN1Q8TCX5 695 aa16.42■□□□□ 0.22
SHKBP1-208ENST00000595726 PANK1Q8TE04 598 aa16.42■□□□□ 0.22
SHKBP1-208ENST00000595726 TRERF1Q96PN7 1200 aa16.42■□□□□ 0.22
SHKBP1-208ENST00000595726 PHOX2BQ99453 314 aa16.42■□□□□ 0.22
SHKBP1-208ENST00000595726 ZBED2Q9BTP6 218 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms