RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 MMP19Q99542 508 aa22.16■■□□□ 1.14
DDX39A-214ENST00000590556 SRRDQ9UH36 339 aa22.16■■□□□ 1.14
DDX39A-214ENST00000590556 V9GY48 417 aaPredicted RBP22.16■■□□□ 1.14
DDX39A-214ENST00000590556 PLXNB2O15031 1838 aa22.15■■□□□ 1.14
DDX39A-214ENST00000590556 ABCB11O95342 1321 aa22.15■■□□□ 1.14
DDX39A-214ENST00000590556 LARGE1O95461 756 aa22.15■■□□□ 1.14
DDX39A-214ENST00000590556 IFNAR1P17181 557 aa22.15■■□□□ 1.14
DDX39A-214ENST00000590556 NTRK3Q16288 839 aa22.15■■□□□ 1.14
DDX39A-214ENST00000590556 MUM1L1Q5H9M0 696 aa22.15■■□□□ 1.14
DDX39A-214ENST00000590556 ABRAQ8N0Z2 381 aa22.15■■□□□ 1.14
DDX39A-214ENST00000590556 NECAB1Q8N987 351 aa22.15■■□□□ 1.14
DDX39A-214ENST00000590556 ZSCAN31Q96LW9 406 aaPredicted RBP22.15■■□□□ 1.14
DDX39A-214ENST00000590556 NUDT12Q9BQG2 462 aa22.15■■□□□ 1.14
DDX39A-214ENST00000590556 GJD2Q9UKL4 321 aa22.15■■□□□ 1.14
DDX39A-214ENST00000590556 GABRQQ9UN88 632 aa22.15■■□□□ 1.14
DDX39A-214ENST00000590556 PCDHA1Q9Y5I3 950 aa22.15■■□□□ 1.14
DDX39A-214ENST00000590556 FLT3LGP49771 235 aa22.14■■□□□ 1.13
DDX39A-214ENST00000590556 PRMT2P55345 433 aa22.14■■□□□ 1.13
DDX39A-214ENST00000590556 PRKCZQ05513 592 aa22.14■■□□□ 1.13
DDX39A-214ENST00000590556 GRB14Q14449 540 aa22.14■■□□□ 1.13
DDX39A-214ENST00000590556 MORN1Q5T089 497 aa22.14■■□□□ 1.13
DDX39A-214ENST00000590556 ANKRD35Q8N283 1001 aa22.14■■□□□ 1.13
DDX39A-214ENST00000590556 SOCS4Q8WXH5 440 aa22.14■■□□□ 1.13
DDX39A-214ENST00000590556 PHKBQ93100 1093 aa22.14■■□□□ 1.13
DDX39A-214ENST00000590556 GTF3C6Q969F1 213 aa22.14■■□□□ 1.13
DDX39A-214ENST00000590556 MRPL11Q9Y3B7 192 aaKnown RBP22.14■■□□□ 1.13
DDX39A-214ENST00000590556 ADORA2AP29274 412 aa22.13■■□□□ 1.13
DDX39A-214ENST00000590556 AKAP17AQ02040 695 aaKnown RBP22.13■■□□□ 1.13
DDX39A-214ENST00000590556 MAP2K5Q13163 448 aa22.13■■□□□ 1.13
DDX39A-214ENST00000590556 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.13■■□□□ 1.13
DDX39A-214ENST00000590556 CLEC4DQ8WXI8 215 aa22.13■■□□□ 1.13
DDX39A-214ENST00000590556 DDX11Q96FC9 970 aa22.13■■□□□ 1.13
DDX39A-214ENST00000590556 SH2B1Q9NRF2 756 aaPredicted RBP22.13■■□□□ 1.13
DDX39A-214ENST00000590556 ZNFX1Q9P2E3 1918 aaKnown RBP22.13■■□□□ 1.13
DDX39A-214ENST00000590556 PRPF3O43395 683 aaKnown RBP22.12■■□□□ 1.13
DDX39A-214ENST00000590556 PPFIA3O75145 1194 aa22.12■■□□□ 1.13
DDX39A-214ENST00000590556 CDKL5O76039 1030 aa22.12■■□□□ 1.13
DDX39A-214ENST00000590556 RGS2P41220 211 aa22.12■■□□□ 1.13
DDX39A-214ENST00000590556 MCM2P49736 904 aa22.12■■□□□ 1.13
DDX39A-214ENST00000590556 SSRP1Q08945 709 aaKnown RBP22.12■■□□□ 1.13
DDX39A-214ENST00000590556 NSMFQ6X4W1 530 aa22.12■■□□□ 1.13
DDX39A-214ENST00000590556 DPP9Q86TI2 863 aa22.12■■□□□ 1.13
DDX39A-214ENST00000590556 TRIM22Q8IYM9 498 aa22.12■■□□□ 1.13
DDX39A-214ENST00000590556 USP6NLQ92738 828 aa22.12■■□□□ 1.13
DDX39A-214ENST00000590556 SLC26A6Q9BXS9 759 aa22.12■■□□□ 1.13
DDX39A-214ENST00000590556 RNF26Q9BY78 433 aaPredicted RBP22.12■■□□□ 1.13
DDX39A-214ENST00000590556 RBM27Q9P2N5 1060 aaKnown RBP22.12■■□□□ 1.13
DDX39A-214ENST00000590556 PTPN22Q9Y2R2 807 aa22.12■■□□□ 1.13
DDX39A-214ENST00000590556 NFIBO00712 420 aa22.11■■□□□ 1.13
DDX39A-214ENST00000590556 CD2BP2O95400 341 aaKnown RBP22.11■■□□□ 1.13
DDX39A-214ENST00000590556 PKN2Q16513 984 aaKnown RBP22.11■■□□□ 1.13
DDX39A-214ENST00000590556 HEATR3Q7Z4Q2 680 aa22.11■■□□□ 1.13
DDX39A-214ENST00000590556 RAET1EQ8TD07 263 aa22.11■■□□□ 1.13
DDX39A-214ENST00000590556 A1CFQ9NQ94 594 aaKnown RBP22.11■■□□□ 1.13
DDX39A-214ENST00000590556 PFASO15067 1338 aa22.1■■□□□ 1.13
DDX39A-214ENST00000590556 PGK2P07205 417 aa22.1■■□□□ 1.13
DDX39A-214ENST00000590556 CYP2B6P20813 491 aa22.1■■□□□ 1.13
DDX39A-214ENST00000590556 IRF5Q13568 498 aa22.1■■□□□ 1.13
DDX39A-214ENST00000590556 MCF2L2Q86YR7 1114 aa22.1■■□□□ 1.13
DDX39A-214ENST00000590556 GPKOWQ92917 476 aaPredicted RBP eCLIP22.1■■□□□ 1.13
DDX39A-214ENST00000590556 SLC5A4Q9NY91 659 aa22.1■■□□□ 1.13
DDX39A-214ENST00000590556 ZNF236Q9UL36 1845 aa22.1■■□□□ 1.13
DDX39A-214ENST00000590556 PTPDC1A2A3K4 754 aa22.09■■□□□ 1.13
DDX39A-214ENST00000590556 COBLO75128 1261 aa22.09■■□□□ 1.13
DDX39A-214ENST00000590556 PFKFB3Q16875 520 aaPredicted RBP22.09■■□□□ 1.13
DDX39A-214ENST00000590556 RNF207Q6ZRF8 634 aa22.09■■□□□ 1.13
DDX39A-214ENST00000590556 RGS22Q8NE09 1264 aa22.09■■□□□ 1.13
DDX39A-214ENST00000590556 APBA2Q99767 749 aa22.09■■□□□ 1.13
DDX39A-214ENST00000590556 CYP39A1Q9NYL5 469 aa22.09■■□□□ 1.13
DDX39A-214ENST00000590556 PTCH2Q9Y6C5 1203 aa22.09■■□□□ 1.13
DDX39A-214ENST00000590556 POTEB2H3BUK9 544 aa22.08■■□□□ 1.13
DDX39A-214ENST00000590556 hCG_1984214I3L0E3 225 aa22.08■■□□□ 1.13
DDX39A-214ENST00000590556 CTDNEP1O95476 244 aa22.08■■□□□ 1.13
DDX39A-214ENST00000590556 HOXC6P09630 235 aa22.08■■□□□ 1.13
DDX39A-214ENST00000590556 XRCC5P13010 732 aaKnown RBP22.08■■□□□ 1.13
DDX39A-214ENST00000590556 SCG2P13521 617 aa22.08■■□□□ 1.13
DDX39A-214ENST00000590556 BAATQ14032 418 aaPredicted RBP22.08■■□□□ 1.13
DDX39A-214ENST00000590556 PKN1Q16512 942 aa22.08■■□□□ 1.13
DDX39A-214ENST00000590556 WWC2Q6AWC2 1192 aa22.08■■□□□ 1.13
DDX39A-214ENST00000590556 FBXO46Q6PJ61 603 aaPredicted RBP22.08■■□□□ 1.13
DDX39A-214ENST00000590556 CCDC83Q8IWF9 413 aa22.08■■□□□ 1.13
DDX39A-214ENST00000590556 ZNF713Q8N859 430 aaPredicted RBP22.08■■□□□ 1.13
DDX39A-214ENST00000590556 MAF1Q9H063 256 aa22.08■■□□□ 1.13
DDX39A-214ENST00000590556 DNAJC25-GNG10A0A024R161 153 aa22.07■■□□□ 1.12
DDX39A-214ENST00000590556 ADCY3O60266 1144 aa22.07■■□□□ 1.12
DDX39A-214ENST00000590556 ST3GAL1Q11201 340 aa22.07■■□□□ 1.12
DDX39A-214ENST00000590556 TBC1D5Q92609 795 aa22.07■■□□□ 1.12
DDX39A-214ENST00000590556 TMX3Q96JJ7 454 aa22.07■■□□□ 1.12
DDX39A-214ENST00000590556 STXBP3O00186 592 aa22.06■■□□□ 1.12
DDX39A-214ENST00000590556 OPLAHO14841 1288 aa22.06■■□□□ 1.12
DDX39A-214ENST00000590556 DEXIO95424 95 aa22.06■■□□□ 1.12
DDX39A-214ENST00000590556 CFBP00751 764 aa22.06■■□□□ 1.12
DDX39A-214ENST00000590556 CALML3P27482 149 aa22.06■■□□□ 1.12
DDX39A-214ENST00000590556 NAPAP54920 295 aa22.06■■□□□ 1.12
DDX39A-214ENST00000590556 RPS6P62753 249 aaKnown RBP22.06■■□□□ 1.12
DDX39A-214ENST00000590556 CNTN2Q02246 1040 aa22.06■■□□□ 1.12
DDX39A-214ENST00000590556 ZNF792Q3KQV3 632 aa22.06■■□□□ 1.12
DDX39A-214ENST00000590556 SLC30A10Q6XR72 485 aa22.06■■□□□ 1.12
DDX39A-214ENST00000590556 NSUN7Q8NE18 718 aaKnown RBP22.06■■□□□ 1.12
DDX39A-214ENST00000590556 NPLOC4Q8TAT6 608 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms