RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 JAG1P78504 1218 aa10.78□□□□□ -0.68
VPS25-205ENST00000590339 LACTBP83111 547 aaPredicted RBP10.78□□□□□ -0.68
VPS25-205ENST00000590339 SHROOM1Q2M3G4 852 aaPredicted RBP10.78□□□□□ -0.68
VPS25-205ENST00000590339 TPRNQ4KMQ1 711 aa10.78□□□□□ -0.68
VPS25-205ENST00000590339 ASPRV1Q53RT3 343 aa10.78□□□□□ -0.68
VPS25-205ENST00000590339 TATDN1Q6P1N9 297 aa10.78□□□□□ -0.68
VPS25-205ENST00000590339 PRRT2Q7Z6L0 340 aaPredicted RBP10.78□□□□□ -0.68
VPS25-205ENST00000590339 PPP1R9BQ96SB3 815 aa10.78□□□□□ -0.68
VPS25-205ENST00000590339 TNMDQ9H2S6 317 aa10.78□□□□□ -0.68
VPS25-205ENST00000590339 BRMS1Q9HCU9 246 aa10.78□□□□□ -0.68
VPS25-205ENST00000590339 HPSEQ9Y251 543 aa10.78□□□□□ -0.68
VPS25-205ENST00000590339 ATAD5Q96QE3 1844 aa10.77□□□□□ -0.68
VPS25-205ENST00000590339 FAM205CA6NFA0 338 aa10.77□□□□□ -0.69
VPS25-205ENST00000590339 M0R2N6 131 aa10.77□□□□□ -0.69
VPS25-205ENST00000590339 STXBP3O00186 592 aa10.77□□□□□ -0.69
VPS25-205ENST00000590339 TTLL1O95922 423 aa10.77□□□□□ -0.69
VPS25-205ENST00000590339 CCDC192P0DO97 292 aa10.77□□□□□ -0.69
VPS25-205ENST00000590339 CALML3P27482 149 aa10.77□□□□□ -0.69
VPS25-205ENST00000590339 UVSSAQ2YD98 709 aa10.77□□□□□ -0.69
VPS25-205ENST00000590339 EARS2Q5JPH6 523 aaKnown RBP10.77□□□□□ -0.69
VPS25-205ENST00000590339 RESP18Q5W5W9 173 aa10.77□□□□□ -0.69
VPS25-205ENST00000590339 WWC2Q6AWC2 1192 aa10.77□□□□□ -0.69
VPS25-205ENST00000590339 TYW1BQ6NUM6 668 aa10.77□□□□□ -0.69
VPS25-205ENST00000590339 CLEC10AQ8IUN9 316 aa10.77□□□□□ -0.69
VPS25-205ENST00000590339 ZNF280CQ8ND82 737 aa10.77□□□□□ -0.69
VPS25-205ENST00000590339 CCDC148Q8NFR7 591 aa10.77□□□□□ -0.69
VPS25-205ENST00000590339 PDLIM2Q96JY6 352 aa10.77□□□□□ -0.69
VPS25-205ENST00000590339 PARK7Q99497 189 aaKnown RBP10.77□□□□□ -0.69
VPS25-205ENST00000590339 RIOX1Q9H6W3 641 aa10.77□□□□□ -0.69
VPS25-205ENST00000590339 FBXO2Q9UK22 296 aaPredicted RBP10.77□□□□□ -0.69
VPS25-205ENST00000590339 PTCH2Q9Y6C5 1203 aa10.77□□□□□ -0.69
VPS25-205ENST00000590339 KLRF2D3W0D1 207 aa10.76□□□□□ -0.69
VPS25-205ENST00000590339 hCG_1984214I3L0E3 225 aa10.76□□□□□ -0.69
VPS25-205ENST00000590339 KINO60870 393 aaKnown RBP10.76□□□□□ -0.69
VPS25-205ENST00000590339 BMP15O95972 392 aa10.76□□□□□ -0.69
VPS25-205ENST00000590339 PFKFB1P16118 471 aa10.76□□□□□ -0.69
VPS25-205ENST00000590339 PTPREP23469 700 aa10.76□□□□□ -0.69
VPS25-205ENST00000590339 CTGFP29279 349 aa10.76□□□□□ -0.69
VPS25-205ENST00000590339 MARCKSP29966 332 aaPredicted RBP10.76□□□□□ -0.69
VPS25-205ENST00000590339 TRAPPC10P48553 1259 aa10.76□□□□□ -0.69
VPS25-205ENST00000590339 NDUFA8P51970 172 aa10.76□□□□□ -0.69
VPS25-205ENST00000590339 HMGCS2P54868 508 aa10.76□□□□□ -0.69
VPS25-205ENST00000590339 TYRO3Q06418 890 aa10.76□□□□□ -0.69
VPS25-205ENST00000590339 CCDC173Q0VFZ6 552 aa10.76□□□□□ -0.69
VPS25-205ENST00000590339 TREML2Q5T2D2 321 aa10.76□□□□□ -0.69
VPS25-205ENST00000590339 GALNT17Q6IS24 598 aa10.76□□□□□ -0.69
VPS25-205ENST00000590339 SHC4Q6S5L8 630 aa10.76□□□□□ -0.69
VPS25-205ENST00000590339 LRRC47Q8N1G4 583 aaKnown RBP10.76□□□□□ -0.69
VPS25-205ENST00000590339 ZNF713Q8N859 430 aaPredicted RBP10.76□□□□□ -0.69
VPS25-205ENST00000590339 SMCR8Q8TEV9 937 aaPredicted RBP10.76□□□□□ -0.69
VPS25-205ENST00000590339 GPKOWQ92917 476 aaPredicted RBP eCLIP10.76□□□□□ -0.69
VPS25-205ENST00000590339 TIGD1Q96MW7 591 aa10.76□□□□□ -0.69
VPS25-205ENST00000590339 AS3MTQ9HBK9 375 aa10.76□□□□□ -0.69
VPS25-205ENST00000590339 BARHL2Q9NY43 387 aa10.76□□□□□ -0.69
VPS25-205ENST00000590339 NYAP2Q9P242 653 aa10.76□□□□□ -0.69
VPS25-205ENST00000590339 NOL7Q9UMY1 257 aaKnown RBP10.76□□□□□ -0.69
VPS25-205ENST00000590339 PCDHA4Q9UN74 947 aa10.76□□□□□ -0.69
VPS25-205ENST00000590339 CEP131Q9UPN4 1083 aa10.76□□□□□ -0.69
VPS25-205ENST00000590339 PCDHB6Q9Y5E3 794 aa10.76□□□□□ -0.69
VPS25-205ENST00000590339 MRVI1Q9Y6F6 885 aa10.76□□□□□ -0.69
VPS25-205ENST00000590339 OTOFQ9HC10 1997 aa10.76□□□□□ -0.69
VPS25-205ENST00000590339 A0A1B0GVL5 298 aa10.75□□□□□ -0.69
VPS25-205ENST00000590339 ESYT2A0FGR8 921 aa10.75□□□□□ -0.69
VPS25-205ENST00000590339 ADAMTS3O15072 1205 aa10.75□□□□□ -0.69
VPS25-205ENST00000590339 GH2P01242 217 aa10.75□□□□□ -0.69
VPS25-205ENST00000590339 ASNSP08243 561 aa10.75□□□□□ -0.69
VPS25-205ENST00000590339 GOLGA8HP0CJ92 632 aa10.75□□□□□ -0.69
VPS25-205ENST00000590339 ZNF543Q08ER8 600 aa10.75□□□□□ -0.69
VPS25-205ENST00000590339 MTMR2Q13614 643 aa10.75□□□□□ -0.69
VPS25-205ENST00000590339 CAMK4Q16566 473 aa10.75□□□□□ -0.69
VPS25-205ENST00000590339 SLC9C1Q4G0N8 1177 aa10.75□□□□□ -0.69
VPS25-205ENST00000590339 USP17L2Q6R6M4 530 aa10.75□□□□□ -0.69
VPS25-205ENST00000590339 CKAP2LQ8IYA6 745 aa10.75□□□□□ -0.69
VPS25-205ENST00000590339 BLIDQ8IZY5 108 aa10.75□□□□□ -0.69
VPS25-205ENST00000590339 ANKRD13CQ8N6S4 541 aa10.75□□□□□ -0.69
VPS25-205ENST00000590339 KRI1Q8N9T8 703 aaKnown RBP10.75□□□□□ -0.69
VPS25-205ENST00000590339 ZNF579Q8NAF0 562 aaKnown RBP10.75□□□□□ -0.69
VPS25-205ENST00000590339 SH3TC2Q8TF17 1288 aa10.75□□□□□ -0.69
VPS25-205ENST00000590339 MKL1Q969V6 931 aa10.75□□□□□ -0.69
VPS25-205ENST00000590339 TRIM47Q96LD4 638 aa10.75□□□□□ -0.69
VPS25-205ENST00000590339 CABP5Q9NP86 173 aa10.75□□□□□ -0.69
VPS25-205ENST00000590339 TMOD4Q9NZQ9 345 aa10.75□□□□□ -0.69
VPS25-205ENST00000590339 SYNPO2Q9UMS6 1093 aa10.75□□□□□ -0.69
VPS25-205ENST00000590339 AGTPBP1Q9UPW5 1226 aa10.75□□□□□ -0.69
VPS25-205ENST00000590339 POTEFA5A3E0 1075 aa10.74□□□□□ -0.69
VPS25-205ENST00000590339 WNT7AO00755 349 aa10.74□□□□□ -0.69
VPS25-205ENST00000590339 OSBPP22059 807 aa10.74□□□□□ -0.69
VPS25-205ENST00000590339 HOXD10P28358 340 aa10.74□□□□□ -0.69
VPS25-205ENST00000590339 NLRP5P59047 1200 aa10.74□□□□□ -0.69
VPS25-205ENST00000590339 ATP2C1P98194 919 aaPredicted RBP10.74□□□□□ -0.69
VPS25-205ENST00000590339 ZYXQ15942 572 aaKnown RBP10.74□□□□□ -0.69
VPS25-205ENST00000590339 CERKLQ49MI3 558 aaPredicted RBP10.74□□□□□ -0.69
VPS25-205ENST00000590339 TTC38Q5R3I4 469 aa10.74□□□□□ -0.69
VPS25-205ENST00000590339 GPATCH4Q5T3I0 446 aaKnown RBP10.74□□□□□ -0.69
VPS25-205ENST00000590339 PPP1R18Q6NYC8 613 aa10.74□□□□□ -0.69
VPS25-205ENST00000590339 TMEM179Q6ZVK1 233 aa10.74□□□□□ -0.69
VPS25-205ENST00000590339 RNF214Q8ND24 703 aa10.74□□□□□ -0.69
VPS25-205ENST00000590339 FAM200AQ8TCP9 573 aa10.74□□□□□ -0.69
VPS25-205ENST00000590339 RAET1EQ8TD07 263 aa10.74□□□□□ -0.69
VPS25-205ENST00000590339 MTMR8Q96EF0 704 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms