RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 UBL7Q96S82 380 aaPredicted RBP7.01□□□□□ -1.29
DNMT1-220ENST00000589351 ZFYVE28Q9HCC9 887 aa7.01□□□□□ -1.29
DNMT1-220ENST00000589351 CNNM1Q9NRU3 951 aa7.01□□□□□ -1.29
DNMT1-220ENST00000589351 STOML1Q9UBI4 398 aa7.01□□□□□ -1.29
DNMT1-220ENST00000589351 COG6Q9Y2V7 657 aa7.01□□□□□ -1.29
DNMT1-220ENST00000589351 CLRN2A0PK11 232 aa7□□□□□ -1.29
DNMT1-220ENST00000589351 FRAT2O75474 233 aaPredicted RBP7□□□□□ -1.29
DNMT1-220ENST00000589351 EIF2AK2P19525 551 aaKnown RBP7□□□□□ -1.29
DNMT1-220ENST00000589351 SPINK2P20155 84 aa7□□□□□ -1.29
DNMT1-220ENST00000589351 HIBADHP31937 336 aaKnown RBP7□□□□□ -1.29
DNMT1-220ENST00000589351 GTF2A2P52657 109 aa7□□□□□ -1.29
DNMT1-220ENST00000589351 UBE4AQ14139 1066 aa7□□□□□ -1.29
DNMT1-220ENST00000589351 MCM6Q14566 821 aa7□□□□□ -1.29
DNMT1-220ENST00000589351 SETDB1Q15047 1291 aa7□□□□□ -1.29
DNMT1-220ENST00000589351 SLC4A8Q2Y0W8 1093 aa7□□□□□ -1.29
DNMT1-220ENST00000589351 HABP4Q5JVS0 413 aaKnown RBP7□□□□□ -1.29
DNMT1-220ENST00000589351 NBPF12Q5TAG4 269 aaPredicted RBP7□□□□□ -1.29
DNMT1-220ENST00000589351 VPS37DQ86XT2 251 aa7□□□□□ -1.29
DNMT1-220ENST00000589351 SIX5Q8N196 739 aa7□□□□□ -1.29
DNMT1-220ENST00000589351 CD99L2Q8TCZ2 262 aa7□□□□□ -1.29
DNMT1-220ENST00000589351 TSR2Q969E8 191 aaKnown RBP7□□□□□ -1.29
DNMT1-220ENST00000589351 ZNF594Q96JF6 807 aaPredicted RBP7□□□□□ -1.29
DNMT1-220ENST00000589351 CLMNQ96JQ2 1002 aa7□□□□□ -1.29
DNMT1-220ENST00000589351 PRMT6Q96LA8 375 aaPredicted RBP7□□□□□ -1.29
DNMT1-220ENST00000589351 KRTAP4-9Q9BYQ8 210 aa7□□□□□ -1.29
DNMT1-220ENST00000589351 R3HDMLQ9H3Y0 253 aa7□□□□□ -1.29
DNMT1-220ENST00000589351 C9orf78Q9NZ63 289 aaPredicted RBP7□□□□□ -1.29
DNMT1-220ENST00000589351 CSADQ9Y600 493 aa7□□□□□ -1.29
DNMT1-220ENST00000589351 IL16Q14005 1332 aa7□□□□□ -1.29
DNMT1-220ENST00000589351 IGF2BP3O00425 579 aaKnown RBP eCLIP6.99□□□□□ -1.29
DNMT1-220ENST00000589351 CASP7P55210 303 aa6.99□□□□□ -1.29
DNMT1-220ENST00000589351 CRHR2Q13324 411 aa6.99□□□□□ -1.29
DNMT1-220ENST00000589351 TAF1CQ15572 869 aaPredicted RBP6.99□□□□□ -1.29
DNMT1-220ENST00000589351 SLC9C1Q4G0N8 1177 aa6.99□□□□□ -1.29
DNMT1-220ENST00000589351 MFSD14BQ5SR56 506 aa6.99□□□□□ -1.29
DNMT1-220ENST00000589351 LMBR1LQ6UX01 489 aa6.99□□□□□ -1.29
DNMT1-220ENST00000589351 G2E3Q7L622 706 aa6.99□□□□□ -1.29
DNMT1-220ENST00000589351 WWC1Q8IX03 1113 aa6.99□□□□□ -1.29
DNMT1-220ENST00000589351 CERS5Q8N5B7 392 aa6.99□□□□□ -1.29
DNMT1-220ENST00000589351 IL22RA1Q8N6P7 574 aa6.99□□□□□ -1.29
DNMT1-220ENST00000589351 ARMC5Q96C12 935 aa6.99□□□□□ -1.29
DNMT1-220ENST00000589351 OPTNQ96CV9 577 aa6.99□□□□□ -1.29
DNMT1-220ENST00000589351 CCDC97Q96F63 343 aaPredicted RBP6.99□□□□□ -1.29
DNMT1-220ENST00000589351 ELP3Q9H9T3 547 aa6.99□□□□□ -1.29
DNMT1-220ENST00000589351 IGSF5Q9NSI5 407 aa6.99□□□□□ -1.29
DNMT1-220ENST00000589351 TMOD2Q9NZR1 351 aa6.99□□□□□ -1.29
DNMT1-220ENST00000589351 TTF2Q9UNY4 1162 aaKnown RBP6.99□□□□□ -1.29
DNMT1-220ENST00000589351 FZD1Q9UP38 647 aa6.99□□□□□ -1.29
DNMT1-220ENST00000589351 SPEF2Q9C093 1822 aa6.99□□□□□ -1.29
DNMT1-220ENST00000589351 CCL15-CCL14A0A0B4J2E2 113 aa6.98□□□□□ -1.29
DNMT1-220ENST00000589351 J3QW42 95 aa6.98□□□□□ -1.29
DNMT1-220ENST00000589351 CETPP11597 493 aa6.98□□□□□ -1.29
DNMT1-220ENST00000589351 KLRK1P26718 216 aa6.98□□□□□ -1.29
DNMT1-220ENST00000589351 NRLP54845 237 aa6.98□□□□□ -1.29
DNMT1-220ENST00000589351 PRMT2P55345 433 aa6.98□□□□□ -1.29
DNMT1-220ENST00000589351 FOXO4P98177 505 aa6.98□□□□□ -1.29
DNMT1-220ENST00000589351 CCL15Q16663 113 aa6.98□□□□□ -1.29
DNMT1-220ENST00000589351 CAVIN4Q5BKX8 364 aa6.98□□□□□ -1.29
DNMT1-220ENST00000589351 GDF6Q6KF10 455 aaPredicted RBP6.98□□□□□ -1.29
DNMT1-220ENST00000589351 TBC1D22AQ8WUA7 517 aa6.98□□□□□ -1.29
DNMT1-220ENST00000589351 UBE2Q2Q8WVN8 375 aa6.98□□□□□ -1.29
DNMT1-220ENST00000589351 PLD4Q96BZ4 506 aa6.98□□□□□ -1.29
DNMT1-220ENST00000589351 TDRD3Q9H7E2 651 aaKnown RBP6.98□□□□□ -1.29
DNMT1-220ENST00000589351 KLK14Q9P0G3 267 aa6.98□□□□□ -1.29
DNMT1-220ENST00000589351 ZNF70Q9UC06 446 aaPredicted RBP6.98□□□□□ -1.29
DNMT1-220ENST00000589351 FAM205AQ6ZU69 1335 aa6.98□□□□□ -1.29
DNMT1-220ENST00000589351 ECM29Q5VYK3 1845 aa6.97□□□□□ -1.29
DNMT1-220ENST00000589351 TCP10L2B9ZVM9 353 aa6.97□□□□□ -1.29
DNMT1-220ENST00000589351 SNAP23O00161 211 aa6.97□□□□□ -1.29
DNMT1-220ENST00000589351 GRM8O00222 908 aa6.97□□□□□ -1.29
DNMT1-220ENST00000589351 ALDH1L1O75891 902 aa6.97□□□□□ -1.29
DNMT1-220ENST00000589351 EN2P19622 333 aaPredicted RBP6.97□□□□□ -1.29
DNMT1-220ENST00000589351 HOXD10P28358 340 aa6.97□□□□□ -1.29
DNMT1-220ENST00000589351 HDLBPQ00341 1268 aaKnown RBP6.97□□□□□ -1.29
DNMT1-220ENST00000589351 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.97□□□□□ -1.29
DNMT1-220ENST00000589351 WDR63Q8IWG1 891 aa6.97□□□□□ -1.29
DNMT1-220ENST00000589351 ARMC10Q8N2F6 343 aa6.97□□□□□ -1.29
DNMT1-220ENST00000589351 TDRD7Q8NHU6 1098 aaKnown RBP6.97□□□□□ -1.29
DNMT1-220ENST00000589351 ADAMTS19Q8TE59 1207 aa6.97□□□□□ -1.29
DNMT1-220ENST00000589351 POM121Q96HA1 1249 aa6.97□□□□□ -1.29
DNMT1-220ENST00000589351 ZCCHC17Q9NP64 241 aaKnown RBP6.97□□□□□ -1.29
DNMT1-220ENST00000589351 TLR7Q9NYK1 1049 aaKnown RBP6.97□□□□□ -1.29
DNMT1-220ENST00000589351 MROH5Q6ZUA9 1318 aa6.97□□□□□ -1.29
DNMT1-220ENST00000589351 CACNA1FO60840 1977 aa6.97□□□□□ -1.29
DNMT1-220ENST00000589351 DHX15O43143 795 aaKnown RBP6.96□□□□□ -1.3
DNMT1-220ENST00000589351 TLR2O60603 784 aa6.96□□□□□ -1.3
DNMT1-220ENST00000589351 VAMP4O75379 141 aa6.96□□□□□ -1.3
DNMT1-220ENST00000589351 RASA1P20936 1047 aa6.96□□□□□ -1.3
DNMT1-220ENST00000589351 CRKP46108 304 aa6.96□□□□□ -1.3
DNMT1-220ENST00000589351 ARSDP51689 593 aa6.96□□□□□ -1.3
DNMT1-220ENST00000589351 NFIAQ12857 509 aa6.96□□□□□ -1.3
DNMT1-220ENST00000589351 SNAPC2Q13487 334 aa6.96□□□□□ -1.3
DNMT1-220ENST00000589351 BEND3Q5T5X7 828 aa6.96□□□□□ -1.3
DNMT1-220ENST00000589351 DCAF15Q66K64 600 aa6.96□□□□□ -1.3
DNMT1-220ENST00000589351 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.96□□□□□ -1.3
DNMT1-220ENST00000589351 DTX1Q86Y01 620 aa6.96□□□□□ -1.3
DNMT1-220ENST00000589351 ERO1BQ86YB8 467 aa6.96□□□□□ -1.3
DNMT1-220ENST00000589351 TEKT1Q969V4 418 aa6.96□□□□□ -1.3
DNMT1-220ENST00000589351 ZNF333Q96JL9 665 aa6.96□□□□□ -1.3
DNMT1-220ENST00000589351 FAM84BQ96KN1 310 aaPredicted RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms