RNA–Protein interactions for RNA: ENST00000563605.1

AC009088.3-201, humanhuman

TSL 3 BASIC

Gene AC009088.3, Length 357 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009088.3-201ENST00000563605 SYNGAP1Q96PV0 1343 aa18.21■□□□□ 0.51
AC009088.3-201ENST00000563605 PGK1P00558 417 aa18.2■□□□□ 0.5
AC009088.3-201ENST00000563605 CALML3P27482 149 aa18.2■□□□□ 0.5
AC009088.3-201ENST00000563605 ATN1P54259 1190 aaPredicted RBP18.2■□□□□ 0.5
AC009088.3-201ENST00000563605 ANTXR2P58335 489 aa18.2■□□□□ 0.5
AC009088.3-201ENST00000563605 ACVR2BQ13705 512 aa18.2■□□□□ 0.5
AC009088.3-201ENST00000563605 CDC37Q16543 378 aaPredicted RBP18.2■□□□□ 0.5
AC009088.3-201ENST00000563605 ARMCX2Q7L311 632 aa18.2■□□□□ 0.5
AC009088.3-201ENST00000563605 MB21D2Q8IYB1 491 aaPredicted RBP18.2■□□□□ 0.5
AC009088.3-201ENST00000563605 XPNPEP3Q9NQH7 507 aa18.2■□□□□ 0.5
AC009088.3-201ENST00000563605 GPHNQ9NQX3 736 aaPredicted RBP18.2■□□□□ 0.5
AC009088.3-201ENST00000563605 FAM184BQ9ULE4 1060 aa18.2■□□□□ 0.5
AC009088.3-201ENST00000563605 KBTBD13C9JR72 458 aa18.19■□□□□ 0.5
AC009088.3-201ENST00000563605 KLRF2D3W0D1 207 aa18.19■□□□□ 0.5
AC009088.3-201ENST00000563605 PRC1O43663 620 aa18.19■□□□□ 0.5
AC009088.3-201ENST00000563605 COL6A1P12109 1028 aa18.19■□□□□ 0.5
AC009088.3-201ENST00000563605 AKR1A1P14550 325 aa18.19■□□□□ 0.5
AC009088.3-201ENST00000563605 NECTIN1Q15223 517 aa18.19■□□□□ 0.5
AC009088.3-201ENST00000563605 CLEC4DQ8WXI8 215 aa18.19■□□□□ 0.5
AC009088.3-201ENST00000563605 FERMT2Q96AC1 680 aa18.19■□□□□ 0.5
AC009088.3-201ENST00000563605 JMJD4Q9H9V9 463 aa18.19■□□□□ 0.5
AC009088.3-201ENST00000563605 DNM1LO00429 736 aa18.18■□□□□ 0.5
AC009088.3-201ENST00000563605 ADCYAP1R1P41586 468 aa18.18■□□□□ 0.5
AC009088.3-201ENST00000563605 COL9A3Q14050 684 aaPredicted RBP18.18■□□□□ 0.5
AC009088.3-201ENST00000563605 LRRC41Q15345 812 aa18.18■□□□□ 0.5
AC009088.3-201ENST00000563605 QRICH1Q2TAL8 776 aa18.18■□□□□ 0.5
AC009088.3-201ENST00000563605 RNF207Q6ZRF8 634 aa18.18■□□□□ 0.5
AC009088.3-201ENST00000563605 EEPD1Q7L9B9 569 aa18.18■□□□□ 0.5
AC009088.3-201ENST00000563605 CATIPQ7Z7H3 387 aa18.18■□□□□ 0.5
AC009088.3-201ENST00000563605 IGDCC4Q8TDY8 1250 aa18.18■□□□□ 0.5
AC009088.3-201ENST00000563605 NUP133Q8WUM0 1156 aa18.18■□□□□ 0.5
AC009088.3-201ENST00000563605 ABHD16BQ9H3Z7 469 aa18.18■□□□□ 0.5
AC009088.3-201ENST00000563605 MAD2L2Q9UI95 211 aa18.18■□□□□ 0.5
AC009088.3-201ENST00000563605 PNMA2Q9UL42 364 aa18.18■□□□□ 0.5
AC009088.3-201ENST00000563605 ASB14A6NK59 587 aa18.17■□□□□ 0.5
AC009088.3-201ENST00000563605 MCM5P33992 734 aa18.17■□□□□ 0.5
AC009088.3-201ENST00000563605 LRRC26Q2I0M4 334 aa18.17■□□□□ 0.5
AC009088.3-201ENST00000563605 CCDC144BQ3MJ40 725 aa18.17■□□□□ 0.5
AC009088.3-201ENST00000563605 SLC30A10Q6XR72 485 aa18.17■□□□□ 0.5
AC009088.3-201ENST00000563605 NFXL1Q6ZNB6 911 aa18.17■□□□□ 0.5
AC009088.3-201ENST00000563605 NOL8Q76FK4 1167 aaKnown RBP18.17■□□□□ 0.5
AC009088.3-201ENST00000563605 ZMYND8Q9ULU4 1186 aaPredicted RBP18.17■□□□□ 0.5
AC009088.3-201ENST00000563605 WDR19Q8NEZ3 1342 aa18.17■□□□□ 0.5
AC009088.3-201ENST00000563605 PLXNA1Q9UIW2 1896 aa18.16■□□□□ 0.5
AC009088.3-201ENST00000563605 PALM3A6NDB9 673 aaPredicted RBP18.16■□□□□ 0.5
AC009088.3-201ENST00000563605 SYN1P17600 705 aa18.16■□□□□ 0.5
AC009088.3-201ENST00000563605 GRM4Q14833 912 aa18.16■□□□□ 0.5
AC009088.3-201ENST00000563605 RNF20Q5VTR2 975 aa18.16■□□□□ 0.5
AC009088.3-201ENST00000563605 RNF180Q86T96 592 aa18.16■□□□□ 0.5
AC009088.3-201ENST00000563605 FBXO11Q86XK2 927 aa18.16■□□□□ 0.5
AC009088.3-201ENST00000563605 PIBF1Q8WXW3 757 aa18.16■□□□□ 0.5
AC009088.3-201ENST00000563605 TBC1D5Q92609 795 aa18.16■□□□□ 0.5
AC009088.3-201ENST00000563605 MYL10Q9BUA6 226 aa18.16■□□□□ 0.5
AC009088.3-201ENST00000563605 LRRC2Q9BYS8 371 aa18.16■□□□□ 0.5
AC009088.3-201ENST00000563605 COLQQ9Y215 455 aaPredicted RBP18.16■□□□□ 0.5
AC009088.3-201ENST00000563605 ASTN1O14525 1302 aa18.16■□□□□ 0.5
AC009088.3-201ENST00000563605 SMCHD1A6NHR9 2005 aa18.15■□□□□ 0.5
AC009088.3-201ENST00000563605 RPS6P62753 249 aaKnown RBP18.15■□□□□ 0.5
AC009088.3-201ENST00000563605 IRX5P78411 483 aaPredicted RBP18.15■□□□□ 0.5
AC009088.3-201ENST00000563605 CHRDL2Q6WN34 429 aa18.15■□□□□ 0.5
AC009088.3-201ENST00000563605 HOMER1Q86YM7 354 aa18.15■□□□□ 0.5
AC009088.3-201ENST00000563605 LY9Q9HBG7 655 aa18.15■□□□□ 0.5
AC009088.3-201ENST00000563605 PCDH10Q9P2E7 1040 aa18.15■□□□□ 0.5
AC009088.3-201ENST00000563605 ADD3Q9UEY8 706 aaKnown RBP18.15■□□□□ 0.5
AC009088.3-201ENST00000563605 CCDC69A6NI79 296 aa18.14■□□□□ 0.49
AC009088.3-201ENST00000563605 ADCY6O43306 1168 aa18.14■□□□□ 0.49
AC009088.3-201ENST00000563605 TNFAIP2Q03169 654 aa18.14■□□□□ 0.49
AC009088.3-201ENST00000563605 TROAPQ12815 778 aa18.14■□□□□ 0.49
AC009088.3-201ENST00000563605 RAB11FIP4Q86YS3 637 aa18.14■□□□□ 0.49
AC009088.3-201ENST00000563605 FBXO16Q8IX29 292 aaPredicted RBP18.14■□□□□ 0.49
AC009088.3-201ENST00000563605 KATNBL1Q9H079 304 aa18.14■□□□□ 0.49
AC009088.3-201ENST00000563605 PDGFCQ9NRA1 345 aa18.14■□□□□ 0.49
AC009088.3-201ENST00000563605 ABCB11O95342 1321 aa18.14■□□□□ 0.49
AC009088.3-201ENST00000563605 CEP290O15078 2479 aa18.14■□□□□ 0.49
AC009088.3-201ENST00000563605 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.13■□□□□ 0.49
AC009088.3-201ENST00000563605 SH2B2O14492 632 aaPredicted RBP18.13■□□□□ 0.49
AC009088.3-201ENST00000563605 DUSP11O75319 330 aaKnown RBP18.13■□□□□ 0.49
AC009088.3-201ENST00000563605 ALDH5A1P51649 535 aaPredicted RBP18.13■□□□□ 0.49
AC009088.3-201ENST00000563605 SLC35G1Q2M3R5 365 aa18.13■□□□□ 0.49
AC009088.3-201ENST00000563605 RASEFQ8IZ41 740 aa18.13■□□□□ 0.49
AC009088.3-201ENST00000563605 ZNF654Q8IZM8 581 aa18.13■□□□□ 0.49
AC009088.3-201ENST00000563605 NEK1Q96PY6 1258 aa18.13■□□□□ 0.49
AC009088.3-201ENST00000563605 PIGSQ96S52 555 aa18.13■□□□□ 0.49
AC009088.3-201ENST00000563605 AMNQ9BXJ7 453 aa18.13■□□□□ 0.49
AC009088.3-201ENST00000563605 ATP11BQ9Y2G3 1177 aa18.13■□□□□ 0.49
AC009088.3-201ENST00000563605 MRPL11Q9Y3B7 192 aaKnown RBP18.13■□□□□ 0.49
AC009088.3-201ENST00000563605 SYNRGQ9UMZ2 1314 aa18.13■□□□□ 0.49
AC009088.3-201ENST00000563605 MYADML2A6NDP7 307 aa18.12■□□□□ 0.49
AC009088.3-201ENST00000563605 ZBTB5O15062 677 aa18.12■□□□□ 0.49
AC009088.3-201ENST00000563605 ADAMTS4O75173 837 aa18.12■□□□□ 0.49
AC009088.3-201ENST00000563605 C6orf222P0C671 652 aaPredicted RBP18.12■□□□□ 0.49
AC009088.3-201ENST00000563605 RXRAP19793 462 aa18.12■□□□□ 0.49
AC009088.3-201ENST00000563605 PTGS1P23219 599 aa18.12■□□□□ 0.49
AC009088.3-201ENST00000563605 KCNA10Q16322 511 aa18.12■□□□□ 0.49
AC009088.3-201ENST00000563605 SLC39A5Q6ZMH5 540 aa18.12■□□□□ 0.49
AC009088.3-201ENST00000563605 TMTC2Q8N394 836 aa18.12■□□□□ 0.49
AC009088.3-201ENST00000563605 CTCFLQ8NI51 663 aaPredicted RBP18.12■□□□□ 0.49
AC009088.3-201ENST00000563605 TMEM87BQ96K49 555 aa18.12■□□□□ 0.49
AC009088.3-201ENST00000563605 TCEANC2Q96MN5 208 aa18.12■□□□□ 0.49
AC009088.3-201ENST00000563605 SPC25Q9HBM1 224 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms