RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 PPFIA3O75145 1194 aa25.94■■□□□ 1.74
SYNGR3-202ENST00000562045 FDPSP14324 419 aaKnown RBP25.94■■□□□ 1.74
SYNGR3-202ENST00000562045 SSRP1Q08945 709 aaKnown RBP25.94■■□□□ 1.74
SYNGR3-202ENST00000562045 WDR78Q5VTH9 848 aa25.94■■□□□ 1.74
SYNGR3-202ENST00000562045 NCAPG2Q86XI2 1143 aa25.94■■□□□ 1.74
SYNGR3-202ENST00000562045 RIOX2Q8IUF8 465 aa25.94■■□□□ 1.74
SYNGR3-202ENST00000562045 PHKBQ93100 1093 aa25.94■■□□□ 1.74
SYNGR3-202ENST00000562045 ZNFX1Q9P2E3 1918 aaKnown RBP25.93■■□□□ 1.74
SYNGR3-202ENST00000562045 CCNA1P78396 465 aa25.93■■□□□ 1.74
SYNGR3-202ENST00000562045 PRKCZQ05513 592 aa25.93■■□□□ 1.74
SYNGR3-202ENST00000562045 TEX13BQ9BXU2 312 aa25.93■■□□□ 1.74
SYNGR3-202ENST00000562045 MAPK4P31152 587 aa25.92■■□□□ 1.74
SYNGR3-202ENST00000562045 SLC26A6Q9BXS9 759 aa25.92■■□□□ 1.74
SYNGR3-202ENST00000562045 GJD2Q9UKL4 321 aa25.92■■□□□ 1.74
SYNGR3-202ENST00000562045 CTDP1Q9Y5B0 961 aaPredicted RBP25.92■■□□□ 1.74
SYNGR3-202ENST00000562045 SRBD1Q8N5C6 995 aaKnown RBP25.91■■□□□ 1.74
SYNGR3-202ENST00000562045 RNF26Q9BY78 433 aaPredicted RBP25.91■■□□□ 1.74
SYNGR3-202ENST00000562045 SRRDQ9UH36 339 aa25.91■■□□□ 1.74
SYNGR3-202ENST00000562045 ZDHHC9Q9Y397 364 aa25.91■■□□□ 1.74
SYNGR3-202ENST00000562045 OAZ1P54368 228 aa25.91■■□□□ 1.74
SYNGR3-202ENST00000562045 CDC37Q16543 378 aaPredicted RBP25.91■■□□□ 1.74
SYNGR3-202ENST00000562045 PLEKHH3Q7Z736 793 aa25.91■■□□□ 1.74
SYNGR3-202ENST00000562045 SHCBP1Q8NEM2 672 aa25.91■■□□□ 1.74
SYNGR3-202ENST00000562045 WASF1Q92558 559 aa25.91■■□□□ 1.74
SYNGR3-202ENST00000562045 LZTS2Q9BRK4 669 aa25.91■■□□□ 1.74
SYNGR3-202ENST00000562045 HOMER2Q9NSB8 354 aa25.91■■□□□ 1.74
SYNGR3-202ENST00000562045 ICAM1P05362 532 aa25.9■■□□□ 1.74
SYNGR3-202ENST00000562045 FDX1P10109 184 aa25.9■■□□□ 1.74
SYNGR3-202ENST00000562045 AKAP17AQ02040 695 aaKnown RBP25.9■■□□□ 1.74
SYNGR3-202ENST00000562045 FUT2Q10981 343 aa25.9■■□□□ 1.74
SYNGR3-202ENST00000562045 CCAR1Q8IX12 1150 aaKnown RBP25.9■■□□□ 1.74
SYNGR3-202ENST00000562045 CCDC82Q8N4S0 544 aa25.9■■□□□ 1.74
SYNGR3-202ENST00000562045 RIOX1Q9H6W3 641 aa25.9■■□□□ 1.74
SYNGR3-202ENST00000562045 PTPN22Q9Y2R2 807 aa25.9■■□□□ 1.74
SYNGR3-202ENST00000562045 VPS37CA5D8V6 355 aaPredicted RBP25.89■■□□□ 1.74
SYNGR3-202ENST00000562045 H3BQV1 296 aa25.89■■□□□ 1.74
SYNGR3-202ENST00000562045 DEXIO95424 95 aa25.89■■□□□ 1.74
SYNGR3-202ENST00000562045 ZSCAN22P10073 491 aaPredicted RBP25.89■■□□□ 1.74
SYNGR3-202ENST00000562045 FLT3LGP49771 235 aa25.89■■□□□ 1.74
SYNGR3-202ENST00000562045 QRICH1Q2TAL8 776 aa25.89■■□□□ 1.74
SYNGR3-202ENST00000562045 IFFO2Q5TF58 517 aa25.89■■□□□ 1.74
SYNGR3-202ENST00000562045 PIBF1Q8WXW3 757 aa25.89■■□□□ 1.74
SYNGR3-202ENST00000562045 TNPO1Q92973 898 aaKnown RBP25.89■■□□□ 1.74
SYNGR3-202ENST00000562045 COA7Q96BR5 231 aa25.89■■□□□ 1.74
SYNGR3-202ENST00000562045 MTMR8Q96EF0 704 aa25.89■■□□□ 1.74
SYNGR3-202ENST00000562045 MTMR6Q9Y217 621 aa25.89■■□□□ 1.74
SYNGR3-202ENST00000562045 PTCH2Q9Y6C5 1203 aa25.89■■□□□ 1.74
SYNGR3-202ENST00000562045 BRCA2P51587 3418 aa25.89■■□□□ 1.73
SYNGR3-202ENST00000562045 PPP1R11O60927 126 aaPredicted RBP25.88■■□□□ 1.73
SYNGR3-202ENST00000562045 MUM1L1Q5H9M0 696 aa25.88■■□□□ 1.73
SYNGR3-202ENST00000562045 MORN1Q5T089 497 aa25.88■■□□□ 1.73
SYNGR3-202ENST00000562045 PIGSQ96S52 555 aa25.88■■□□□ 1.73
SYNGR3-202ENST00000562045 MCOLN1Q9GZU1 580 aa25.88■■□□□ 1.73
SYNGR3-202ENST00000562045 MROH8Q9H579 483 aa25.88■■□□□ 1.73
SYNGR3-202ENST00000562045 CCPG1Q9ULG6 757 aa25.88■■□□□ 1.73
SYNGR3-202ENST00000562045 SLC25A27O95847 323 aa25.88■■□□□ 1.73
SYNGR3-202ENST00000562045 ALAS1P13196 640 aa25.88■■□□□ 1.73
SYNGR3-202ENST00000562045 PTPREP23469 700 aa25.88■■□□□ 1.73
SYNGR3-202ENST00000562045 HOMER1Q86YM7 354 aa25.88■■□□□ 1.73
SYNGR3-202ENST00000562045 RGS22Q8NE09 1264 aa25.88■■□□□ 1.73
SYNGR3-202ENST00000562045 C8orf76Q96K31 380 aa25.88■■□□□ 1.73
SYNGR3-202ENST00000562045 ALG1Q9BT22 464 aa25.88■■□□□ 1.73
SYNGR3-202ENST00000562045 RBM27Q9P2N5 1060 aaKnown RBP25.88■■□□□ 1.73
SYNGR3-202ENST00000562045 CNTNAP5Q8WYK1 1306 aa25.87■■□□□ 1.73
SYNGR3-202ENST00000562045 PRPF3O43395 683 aaKnown RBP25.87■■□□□ 1.73
SYNGR3-202ENST00000562045 GNRH1P01148 92 aa25.87■■□□□ 1.73
SYNGR3-202ENST00000562045 USP6NLQ92738 828 aa25.87■■□□□ 1.73
SYNGR3-202ENST00000562045 ZNF236Q9UL36 1845 aa25.87■■□□□ 1.73
SYNGR3-202ENST00000562045 hCG_1642624A0A1W2PR95 340 aa25.86■■□□□ 1.73
SYNGR3-202ENST00000562045 GRB14Q14449 540 aa25.86■■□□□ 1.73
SYNGR3-202ENST00000562045 USH1GQ495M9 461 aa25.86■■□□□ 1.73
SYNGR3-202ENST00000562045 RNF146Q9NTX7 359 aa25.86■■□□□ 1.73
SYNGR3-202ENST00000562045 SMARCA1P28370 1054 aa25.85■■□□□ 1.73
SYNGR3-202ENST00000562045 ARHGEF6Q15052 776 aa25.85■■□□□ 1.73
SYNGR3-202ENST00000562045 FOXD4L5Q5VV16 416 aaPredicted RBP25.85■■□□□ 1.73
SYNGR3-202ENST00000562045 FOXD4L4Q8WXT5 416 aaPredicted RBP25.85■■□□□ 1.73
SYNGR3-202ENST00000562045 TRERF1Q96PN7 1200 aa25.85■■□□□ 1.73
SYNGR3-202ENST00000562045 SPZ1Q9BXG8 430 aa25.85■■□□□ 1.73
SYNGR3-202ENST00000562045 PLXNA1Q9UIW2 1896 aa25.85■■□□□ 1.73
SYNGR3-202ENST00000562045 LCTP09848 1927 aa25.85■■□□□ 1.73
SYNGR3-202ENST00000562045 F13A1P00488 732 aa25.85■■□□□ 1.73
SYNGR3-202ENST00000562045 CYP2B6P20813 491 aa25.85■■□□□ 1.73
SYNGR3-202ENST00000562045 ADORA2AP29274 412 aa25.85■■□□□ 1.73
SYNGR3-202ENST00000562045 V9GY48 417 aaPredicted RBP25.85■■□□□ 1.73
SYNGR3-202ENST00000562045 SLC15A5A6NIM6 579 aa25.84■■□□□ 1.73
SYNGR3-202ENST00000562045 ZBTB5O15062 677 aa25.84■■□□□ 1.73
SYNGR3-202ENST00000562045 COBLO75128 1261 aa25.84■■□□□ 1.73
SYNGR3-202ENST00000562045 PGK2P07205 417 aa25.84■■□□□ 1.73
SYNGR3-202ENST00000562045 HOXD10P28358 340 aa25.84■■□□□ 1.73
SYNGR3-202ENST00000562045 FBXO18Q8NFZ0 1043 aa25.84■■□□□ 1.73
SYNGR3-202ENST00000562045 NUDT12Q9BQG2 462 aa25.84■■□□□ 1.73
SYNGR3-202ENST00000562045 IVNS1ABPQ9Y6Y0 642 aa25.84■■□□□ 1.73
SYNGR3-202ENST00000562045 NFIBO00712 420 aa25.83■■□□□ 1.73
SYNGR3-202ENST00000562045 TRIM29Q14134 588 aa25.83■■□□□ 1.73
SYNGR3-202ENST00000562045 FBXO46Q6PJ61 603 aaPredicted RBP25.83■■□□□ 1.73
SYNGR3-202ENST00000562045 CLEC4DQ8WXI8 215 aa25.83■■□□□ 1.73
SYNGR3-202ENST00000562045 MMP19Q99542 508 aa25.83■■□□□ 1.73
SYNGR3-202ENST00000562045 ATP6V1DQ9Y5K8 247 aa25.83■■□□□ 1.73
SYNGR3-202ENST00000562045 FCER1AP12319 257 aa25.83■■□□□ 1.72
SYNGR3-202ENST00000562045 FOSBP53539 338 aa25.83■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms