RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 ZBTB17Q13105 803 aa5.19□□□□□ -1.58
HMGB3P26-201ENST00000560051 CHAF1AQ13111 956 aaPredicted RBP5.19□□□□□ -1.58
HMGB3P26-201ENST00000560051 TBX2Q13207 712 aaPredicted RBP5.19□□□□□ -1.58
HMGB3P26-201ENST00000560051 FKBP5Q13451 457 aaPredicted RBP5.19□□□□□ -1.58
HMGB3P26-201ENST00000560051 SQSTM1Q13501 440 aa5.19□□□□□ -1.58
HMGB3P26-201ENST00000560051 NAA30Q147X3 362 aaPredicted RBP5.19□□□□□ -1.58
HMGB3P26-201ENST00000560051 SF3B3Q15393 1217 aaKnown RBP5.19□□□□□ -1.58
HMGB3P26-201ENST00000560051 COBLL1Q53SF7 1204 aa5.19□□□□□ -1.58
HMGB3P26-201ENST00000560051 DALRD3Q5D0E6 543 aaKnown RBP5.19□□□□□ -1.58
HMGB3P26-201ENST00000560051 CCDC122Q5T0U0 273 aa5.19□□□□□ -1.58
HMGB3P26-201ENST00000560051 FAM83BQ5T0W9 1011 aa5.19□□□□□ -1.58
HMGB3P26-201ENST00000560051 LRCH2Q5VUJ6 765 aa5.19□□□□□ -1.58
HMGB3P26-201ENST00000560051 MZT2AQ6P582 158 aa5.19□□□□□ -1.58
HMGB3P26-201ENST00000560051 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.19□□□□□ -1.58
HMGB3P26-201ENST00000560051 C16orf86Q6ZW13 317 aa5.19□□□□□ -1.58
HMGB3P26-201ENST00000560051 RUFY3Q7L099 469 aa5.19□□□□□ -1.58
HMGB3P26-201ENST00000560051 HS2ST1Q7LGA3 356 aa5.19□□□□□ -1.58
HMGB3P26-201ENST00000560051 SNX32Q86XE0 403 aa5.19□□□□□ -1.58
HMGB3P26-201ENST00000560051 LRRC49Q8IUZ0 686 aa5.19□□□□□ -1.58
HMGB3P26-201ENST00000560051 TTC8Q8TAM2 541 aa5.19□□□□□ -1.58
HMGB3P26-201ENST00000560051 HDAC7Q8WUI4 952 aa5.19□□□□□ -1.58
HMGB3P26-201ENST00000560051 WNT8BQ93098 351 aa5.19□□□□□ -1.58
HMGB3P26-201ENST00000560051 TBC1D20Q96BZ9 403 aa5.19□□□□□ -1.58
HMGB3P26-201ENST00000560051 ASIC4Q96FT7 647 aa5.19□□□□□ -1.58
HMGB3P26-201ENST00000560051 NAF1Q96HR8 494 aaKnown RBP5.19□□□□□ -1.58
HMGB3P26-201ENST00000560051 NEK1Q96PY6 1258 aa5.19□□□□□ -1.58
HMGB3P26-201ENST00000560051 DNAJC7Q99615 494 aa5.19□□□□□ -1.58
HMGB3P26-201ENST00000560051 FEZ1Q99689 392 aa5.19□□□□□ -1.58
HMGB3P26-201ENST00000560051 RUSC1Q9BVN2 902 aa5.19□□□□□ -1.58
HMGB3P26-201ENST00000560051 PBX4Q9BYU1 374 aa5.19□□□□□ -1.58
HMGB3P26-201ENST00000560051 TRIM55Q9BYV6 548 aa5.19□□□□□ -1.58
HMGB3P26-201ENST00000560051 ABCG4Q9H172 646 aa5.19□□□□□ -1.58
HMGB3P26-201ENST00000560051 RASSF4Q9H2L5 321 aa5.19□□□□□ -1.58
HMGB3P26-201ENST00000560051 PRKRIP1Q9H875 184 aaPredicted RBP5.19□□□□□ -1.58
HMGB3P26-201ENST00000560051 RMI1Q9H9A7 625 aa5.19□□□□□ -1.58
HMGB3P26-201ENST00000560051 OSGEPQ9NPF4 335 aa5.19□□□□□ -1.58
HMGB3P26-201ENST00000560051 RASSF1Q9NS23 344 aa5.19□□□□□ -1.58
HMGB3P26-201ENST00000560051 ARGLU1Q9NWB6 273 aaPredicted RBP5.19□□□□□ -1.58
HMGB3P26-201ENST00000560051 TMEM260Q9NX78 707 aa5.19□□□□□ -1.58
HMGB3P26-201ENST00000560051 STK26Q9P289 416 aa5.19□□□□□ -1.58
HMGB3P26-201ENST00000560051 GGT7Q9UJ14 662 aa5.19□□□□□ -1.58
HMGB3P26-201ENST00000560051 CEP131Q9UPN4 1083 aa5.19□□□□□ -1.58
HMGB3P26-201ENST00000560051 RRP15Q9Y3B9 282 aaKnown RBP5.19□□□□□ -1.58
HMGB3P26-201ENST00000560051 SNX5Q9Y5X3 404 aa5.19□□□□□ -1.58
HMGB3P26-201ENST00000560051 SQORQ9Y6N5 450 aa5.19□□□□□ -1.58
HMGB3P26-201ENST00000560051 E2F8A0AVK6 867 aa5.18□□□□□ -1.58
HMGB3P26-201ENST00000560051 CCDC85CA6NKD9 419 aa5.18□□□□□ -1.58
HMGB3P26-201ENST00000560051 ADAMTS4O75173 837 aa5.18□□□□□ -1.58
HMGB3P26-201ENST00000560051 ARIH2O95376 493 aa5.18□□□□□ -1.58
HMGB3P26-201ENST00000560051 GYS1P13807 737 aa5.18□□□□□ -1.58
HMGB3P26-201ENST00000560051 GRK2P25098 689 aa5.18□□□□□ -1.58
HMGB3P26-201ENST00000560051 MPSTP25325 297 aa5.18□□□□□ -1.58
HMGB3P26-201ENST00000560051 PIP4K2BP78356 416 aa5.18□□□□□ -1.58
HMGB3P26-201ENST00000560051 MCL1Q07820 350 aa5.18□□□□□ -1.58
HMGB3P26-201ENST00000560051 PICALMQ13492 652 aa5.18□□□□□ -1.58
HMGB3P26-201ENST00000560051 BECN1Q14457 450 aa5.18□□□□□ -1.58
HMGB3P26-201ENST00000560051 ZC3H12BQ5HYM0 836 aaKnown RBP5.18□□□□□ -1.58
HMGB3P26-201ENST00000560051 KIAA1614Q5VZ46 1190 aa5.18□□□□□ -1.58
HMGB3P26-201ENST00000560051 DUSP27Q5VZP5 1158 aa5.18□□□□□ -1.58
HMGB3P26-201ENST00000560051 SWSAP1Q6NVH7 229 aa5.18□□□□□ -1.58
HMGB3P26-201ENST00000560051 ERAP2Q6P179 960 aa5.18□□□□□ -1.58
HMGB3P26-201ENST00000560051 BRINP3Q76B58 766 aa5.18□□□□□ -1.58
HMGB3P26-201ENST00000560051 DDX42Q86XP3 938 aaKnown RBP eCLIP5.18□□□□□ -1.58
HMGB3P26-201ENST00000560051 DZIP1Q86YF9 867 aaKnown RBP5.18□□□□□ -1.58
HMGB3P26-201ENST00000560051 ETFBKMTQ8IXQ9 262 aa5.18□□□□□ -1.58
HMGB3P26-201ENST00000560051 ARL10Q8N8L6 244 aa5.18□□□□□ -1.58
HMGB3P26-201ENST00000560051 PI4K2BQ8TCG2 481 aa5.18□□□□□ -1.58
HMGB3P26-201ENST00000560051 BRSK1Q8TDC3 778 aa5.18□□□□□ -1.58
HMGB3P26-201ENST00000560051 RASGRP4Q8TDF6 673 aa5.18□□□□□ -1.58
HMGB3P26-201ENST00000560051 UBASH3BQ8TF42 649 aa5.18□□□□□ -1.58
HMGB3P26-201ENST00000560051 HNRNPLLQ8WVV9 542 aaKnown RBP5.18□□□□□ -1.58
HMGB3P26-201ENST00000560051 TAF4BQ92750 862 aa5.18□□□□□ -1.58
HMGB3P26-201ENST00000560051 KLHDC7BQ96G42 594 aa5.18□□□□□ -1.58
HMGB3P26-201ENST00000560051 DMRTB1Q96MA1 342 aa5.18□□□□□ -1.58
HMGB3P26-201ENST00000560051 MFSD14AQ96MC6 490 aa5.18□□□□□ -1.58
HMGB3P26-201ENST00000560051 CITED4Q96RK1 184 aa5.18□□□□□ -1.58
HMGB3P26-201ENST00000560051 KIF2CQ99661 725 aa5.18□□□□□ -1.58
HMGB3P26-201ENST00000560051 UTP14AQ9BVJ6 771 aaKnown RBP5.18□□□□□ -1.58
HMGB3P26-201ENST00000560051 OSBPL1AQ9BXW6 950 aa5.18□□□□□ -1.58
HMGB3P26-201ENST00000560051 DBNDD1Q9H9R9 158 aa5.18□□□□□ -1.58
HMGB3P26-201ENST00000560051 EPB41L4AQ9HCS5 686 aaPredicted RBP5.18□□□□□ -1.58
HMGB3P26-201ENST00000560051 SH2B1Q9NRF2 756 aaPredicted RBP5.18□□□□□ -1.58
HMGB3P26-201ENST00000560051 CCDC87Q9NVE4 849 aa5.18□□□□□ -1.58
HMGB3P26-201ENST00000560051 ABI2Q9NYB9 513 aaPredicted RBP5.18□□□□□ -1.58
HMGB3P26-201ENST00000560051 SEPT10Q9P0V9 454 aa5.18□□□□□ -1.58
HMGB3P26-201ENST00000560051 CLIP2Q9UDT6 1046 aa5.18□□□□□ -1.58
HMGB3P26-201ENST00000560051 ADGRE2Q9UHX3 823 aa5.18□□□□□ -1.58
HMGB3P26-201ENST00000560051 TRAF3IP3Q9Y228 551 aa5.18□□□□□ -1.58
HMGB3P26-201ENST00000560051 LUC7L2Q9Y383 392 aaKnown RBP5.18□□□□□ -1.58
HMGB3P26-201ENST00000560051 MRPL11Q9Y3B7 192 aaKnown RBP5.18□□□□□ -1.58
HMGB3P26-201ENST00000560051 ATP6V0A2Q9Y487 856 aa5.18□□□□□ -1.58
HMGB3P26-201ENST00000560051 AK5Q9Y6K8 562 aa5.18□□□□□ -1.58
HMGB3P26-201ENST00000560051 PNMA6FA0A0J9YX94 578 aa5.17□□□□□ -1.58
HMGB3P26-201ENST00000560051 H3BRJ5 948 aa5.17□□□□□ -1.58
HMGB3P26-201ENST00000560051 DDX3YO15523 660 aaKnown RBP5.17□□□□□ -1.58
HMGB3P26-201ENST00000560051 NEMFO60524 1076 aa5.17□□□□□ -1.58
HMGB3P26-201ENST00000560051 CLASP2O75122 1294 aaKnown RBP5.17□□□□□ -1.58
HMGB3P26-201ENST00000560051 SKILP12757 684 aa5.17□□□□□ -1.58
HMGB3P26-201ENST00000560051 LMNB1P20700 586 aa5.17□□□□□ -1.58
HMGB3P26-201ENST00000560051 EPHA1P21709 976 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms