RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 ZBTB43O43298 467 aa10.42□□□□□ -0.74
SPG11-207ENST00000558138 EPB41L2O43491 1005 aaKnown RBP10.42□□□□□ -0.74
SPG11-207ENST00000558138 GJB1P08034 283 aa10.42□□□□□ -0.74
SPG11-207ENST00000558138 LIFRP42702 1097 aa10.42□□□□□ -0.74
SPG11-207ENST00000558138 GJA8P48165 433 aa10.42□□□□□ -0.74
SPG11-207ENST00000558138 TRAF1Q13077 416 aa10.42□□□□□ -0.74
SPG11-207ENST00000558138 ZNF792Q3KQV3 632 aa10.42□□□□□ -0.74
SPG11-207ENST00000558138 TSGA10IPQ3SY00 556 aa10.42□□□□□ -0.74
SPG11-207ENST00000558138 CCDC82Q8N4S0 544 aa10.42□□□□□ -0.74
SPG11-207ENST00000558138 RRP36Q96EU6 259 aaKnown RBP10.42□□□□□ -0.74
SPG11-207ENST00000558138 LZTS2Q9BRK4 669 aa10.42□□□□□ -0.74
SPG11-207ENST00000558138 TINF2Q9BSI4 451 aa10.42□□□□□ -0.74
SPG11-207ENST00000558138 AMNQ9BXJ7 453 aa10.42□□□□□ -0.74
SPG11-207ENST00000558138 USP26Q9BXU7 913 aa10.42□□□□□ -0.74
SPG11-207ENST00000558138 DIS3Q9Y2L1 958 aaKnown RBP10.42□□□□□ -0.74
SPG11-207ENST00000558138 MRPL11Q9Y3B7 192 aaKnown RBP10.42□□□□□ -0.74
SPG11-207ENST00000558138 MYH6P13533 1939 aa10.42□□□□□ -0.74
SPG11-207ENST00000558138 ZNFX1Q9P2E3 1918 aaKnown RBP10.42□□□□□ -0.74
SPG11-207ENST00000558138 PLXNA1Q9UIW2 1896 aa10.42□□□□□ -0.74
SPG11-207ENST00000558138 PALM3A6NDB9 673 aaPredicted RBP10.41□□□□□ -0.74
SPG11-207ENST00000558138 B4DLN1 442 aa10.41□□□□□ -0.74
SPG11-207ENST00000558138 NFIBO00712 420 aa10.41□□□□□ -0.74
SPG11-207ENST00000558138 ZBTB5O15062 677 aa10.41□□□□□ -0.74
SPG11-207ENST00000558138 MSCO60682 206 aa10.41□□□□□ -0.74
SPG11-207ENST00000558138 SGPL1O95470 568 aa10.41□□□□□ -0.74
SPG11-207ENST00000558138 RPS6KB1P23443 525 aa10.41□□□□□ -0.74
SPG11-207ENST00000558138 METAP2P50579 478 aaKnown RBP eCLIP10.41□□□□□ -0.74
SPG11-207ENST00000558138 MRPL12P52815 198 aaKnown RBP10.41□□□□□ -0.74
SPG11-207ENST00000558138 CNTN2Q02246 1040 aa10.41□□□□□ -0.74
SPG11-207ENST00000558138 TROAPQ12815 778 aa10.41□□□□□ -0.74
SPG11-207ENST00000558138 BAATQ14032 418 aaPredicted RBP10.41□□□□□ -0.74
SPG11-207ENST00000558138 RTN1Q16799 776 aa10.41□□□□□ -0.74
SPG11-207ENST00000558138 PRAMEF19Q5SWL8 479 aa10.41□□□□□ -0.74
SPG11-207ENST00000558138 ANO1Q5XXA6 986 aa10.41□□□□□ -0.74
SPG11-207ENST00000558138 NOL8Q76FK4 1167 aaKnown RBP10.41□□□□□ -0.74
SPG11-207ENST00000558138 MCF2L2Q86YR7 1114 aa10.41□□□□□ -0.74
SPG11-207ENST00000558138 BRF1Q92994 677 aa10.41□□□□□ -0.74
SPG11-207ENST00000558138 PIGSQ96S52 555 aa10.41□□□□□ -0.74
SPG11-207ENST00000558138 JMJD4Q9H9V9 463 aa10.41□□□□□ -0.74
SPG11-207ENST00000558138 RBM28Q9NW13 759 aaKnown RBP10.41□□□□□ -0.74
SPG11-207ENST00000558138 CYP39A1Q9NYL5 469 aa10.41□□□□□ -0.74
SPG11-207ENST00000558138 ADD3Q9UEY8 706 aaKnown RBP10.41□□□□□ -0.74
SPG11-207ENST00000558138 CYP46A1Q9Y6A2 500 aa10.41□□□□□ -0.74
SPG11-207ENST00000558138 ASB14A6NK59 587 aa10.4□□□□□ -0.74
SPG11-207ENST00000558138 FARP2O94887 1054 aaPredicted RBP10.4□□□□□ -0.74
SPG11-207ENST00000558138 PLEKHA8P1O95397 391 aa10.4□□□□□ -0.74
SPG11-207ENST00000558138 CFBP00751 764 aa10.4□□□□□ -0.74
SPG11-207ENST00000558138 EXOSC10Q01780 885 aaKnown RBP10.4□□□□□ -0.74
SPG11-207ENST00000558138 APOBRQ0VD83 1088 aa10.4□□□□□ -0.74
SPG11-207ENST00000558138 APOA5Q6Q788 366 aa10.4□□□□□ -0.74
SPG11-207ENST00000558138 SLC30A10Q6XR72 485 aa10.4□□□□□ -0.74
SPG11-207ENST00000558138 ARMCX2Q7L311 632 aa10.4□□□□□ -0.74
SPG11-207ENST00000558138 CMTR1Q8N1G2 835 aaKnown RBP10.4□□□□□ -0.74
SPG11-207ENST00000558138 FANCBQ8NB91 859 aa10.4□□□□□ -0.74
SPG11-207ENST00000558138 MAP3K14Q99558 947 aa10.4□□□□□ -0.74
SPG11-207ENST00000558138 UPF2Q9HAU5 1272 aaKnown RBP10.4□□□□□ -0.74
SPG11-207ENST00000558138 PAK6Q9NQU5 681 aaPredicted RBP10.4□□□□□ -0.74
SPG11-207ENST00000558138 DDX20Q9UHI6 824 aaKnown RBP10.4□□□□□ -0.74
SPG11-207ENST00000558138 PCDHA1Q9Y5I3 950 aa10.4□□□□□ -0.74
SPG11-207ENST00000558138 GTF3C3Q9Y5Q9 886 aa10.4□□□□□ -0.74
SPG11-207ENST00000558138 RBBP6Q7Z6E9 1792 aaKnown RBP10.39□□□□□ -0.75
SPG11-207ENST00000558138 SYNGAP1Q96PV0 1343 aa10.39□□□□□ -0.75
SPG11-207ENST00000558138 PNMA6FA0A0J9YX94 578 aa10.39□□□□□ -0.75
SPG11-207ENST00000558138 CCDC196A0A1B0GTZ2 297 aa10.39□□□□□ -0.75
SPG11-207ENST00000558138 RARBP10826 455 aa10.39□□□□□ -0.75
SPG11-207ENST00000558138 CYBAP13498 195 aa10.39□□□□□ -0.75
SPG11-207ENST00000558138 AKR1A1P14550 325 aa10.39□□□□□ -0.75
SPG11-207ENST00000558138 RPS6P62753 249 aaKnown RBP10.39□□□□□ -0.75
SPG11-207ENST00000558138 AKAP17AQ02040 695 aaKnown RBP10.39□□□□□ -0.75
SPG11-207ENST00000558138 PDE4DQ08499 809 aa10.39□□□□□ -0.75
SPG11-207ENST00000558138 COL9A3Q14050 684 aaPredicted RBP10.39□□□□□ -0.75
SPG11-207ENST00000558138 MAP3K21Q5TCX8 1036 aa10.39□□□□□ -0.75
SPG11-207ENST00000558138 RUFY3Q7L099 469 aa10.39□□□□□ -0.75
SPG11-207ENST00000558138 EEPD1Q7L9B9 569 aa10.39□□□□□ -0.75
SPG11-207ENST00000558138 ZNF467Q7Z7K2 595 aaPredicted RBP10.39□□□□□ -0.75
SPG11-207ENST00000558138 SGMS1Q86VZ5 419 aa10.39□□□□□ -0.75
SPG11-207ENST00000558138 MSL3Q8N5Y2 521 aaKnown RBP10.39□□□□□ -0.75
SPG11-207ENST00000558138 KCNB2Q92953 911 aa10.39□□□□□ -0.75
SPG11-207ENST00000558138 CUL5Q93034 780 aa10.39□□□□□ -0.75
SPG11-207ENST00000558138 UPF3BQ9BZI7 483 aaKnown RBP10.39□□□□□ -0.75
SPG11-207ENST00000558138 PDRG1Q9NUG6 133 aa10.39□□□□□ -0.75
SPG11-207ENST00000558138 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.39□□□□□ -0.75
SPG11-207ENST00000558138 DNAJC25-GNG10A0A024R161 153 aa10.38□□□□□ -0.75
SPG11-207ENST00000558138 KBTBD13C9JR72 458 aa10.38□□□□□ -0.75
SPG11-207ENST00000558138 SEPT4O43236 478 aa10.38□□□□□ -0.75
SPG11-207ENST00000558138 ALDH5A1P51649 535 aaPredicted RBP10.38□□□□□ -0.75
SPG11-207ENST00000558138 ACVR2BQ13705 512 aa10.38□□□□□ -0.75
SPG11-207ENST00000558138 ARHGEF16Q5VV41 709 aa10.38□□□□□ -0.75
SPG11-207ENST00000558138 TMTC3Q6ZXV5 915 aa10.38□□□□□ -0.75
SPG11-207ENST00000558138 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.38□□□□□ -0.75
SPG11-207ENST00000558138 HEATR3Q7Z4Q2 680 aa10.38□□□□□ -0.75
SPG11-207ENST00000558138 SRBD1Q8N5C6 995 aaKnown RBP10.38□□□□□ -0.75
SPG11-207ENST00000558138 FAM133AQ8N9E0 248 aa10.38□□□□□ -0.75
SPG11-207ENST00000558138 TRPV1Q8NER1 839 aa10.38□□□□□ -0.75
SPG11-207ENST00000558138 SMARCC2Q8TAQ2 1214 aa10.38□□□□□ -0.75
SPG11-207ENST00000558138 CLEC4DQ8WXI8 215 aa10.38□□□□□ -0.75
SPG11-207ENST00000558138 DPF3Q92784 378 aa10.38□□□□□ -0.75
SPG11-207ENST00000558138 SHISA4Q96DD7 197 aa10.38□□□□□ -0.75
SPG11-207ENST00000558138 PURBQ96QR8 312 aaKnown RBP10.38□□□□□ -0.75
SPG11-207ENST00000558138 HTATIP2Q9BUP3 242 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms