RNA–Protein interactions for RNA: ENST00000554698.5

SDR39U1-208, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 1 (best) BASIC

Gene SDR39U1, Length 1,364 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-208ENST00000554698 FBXO46Q6PJ61 603 aaPredicted RBP24.84■■□□□ 1.57
SDR39U1-208ENST00000554698 CCDC82Q8N4S0 544 aa24.84■■□□□ 1.57
SDR39U1-208ENST00000554698 NCOA5Q9HCD5 579 aaKnown RBP24.84■■□□□ 1.57
SDR39U1-208ENST00000554698 HOXC6P09630 235 aa24.83■■□□□ 1.57
SDR39U1-208ENST00000554698 USH1GQ495M9 461 aa24.83■■□□□ 1.57
SDR39U1-208ENST00000554698 CLEC4DQ8WXI8 215 aa24.83■■□□□ 1.57
SDR39U1-208ENST00000554698 PTCH2Q9Y6C5 1203 aa24.83■■□□□ 1.57
SDR39U1-208ENST00000554698 ABCB11O95342 1321 aa24.83■■□□□ 1.57
SDR39U1-208ENST00000554698 ZNF236Q9UL36 1845 aa24.83■■□□□ 1.57
SDR39U1-208ENST00000554698 PFKFB2O60825 505 aa24.82■■□□□ 1.56
SDR39U1-208ENST00000554698 XRCC5P13010 732 aaKnown RBP24.82■■□□□ 1.56
SDR39U1-208ENST00000554698 RGS2P41220 211 aa24.82■■□□□ 1.56
SDR39U1-208ENST00000554698 TRAF1Q13077 416 aa24.82■■□□□ 1.56
SDR39U1-208ENST00000554698 NTRK3Q16288 839 aa24.82■■□□□ 1.56
SDR39U1-208ENST00000554698 PIBF1Q8WXW3 757 aa24.82■■□□□ 1.56
SDR39U1-208ENST00000554698 MCOLN1Q9GZU1 580 aa24.82■■□□□ 1.56
SDR39U1-208ENST00000554698 SEC63Q9UGP8 760 aaKnown RBP24.82■■□□□ 1.56
SDR39U1-208ENST00000554698 HTTP42858 3142 aa24.81■■□□□ 1.56
SDR39U1-208ENST00000554698 NFIBO00712 420 aa24.81■■□□□ 1.56
SDR39U1-208ENST00000554698 STK3Q13188 491 aa24.81■■□□□ 1.56
SDR39U1-208ENST00000554698 RAET1EQ8TD07 263 aa24.81■■□□□ 1.56
SDR39U1-208ENST00000554698 APBA2Q99767 749 aa24.81■■□□□ 1.56
SDR39U1-208ENST00000554698 SLKQ9H2G2 1235 aaPredicted RBP24.81■■□□□ 1.56
SDR39U1-208ENST00000554698 A1CFQ9NQ94 594 aaKnown RBP24.81■■□□□ 1.56
SDR39U1-208ENST00000554698 PCDHA1Q9Y5I3 950 aa24.81■■□□□ 1.56
SDR39U1-208ENST00000554698 PLXNB2O15031 1838 aa24.81■■□□□ 1.56
SDR39U1-208ENST00000554698 DNAJC25-GNG10A0A024R161 153 aa24.8■■□□□ 1.56
SDR39U1-208ENST00000554698 COBLO75128 1261 aa24.8■■□□□ 1.56
SDR39U1-208ENST00000554698 IFNAR1P17181 557 aa24.8■■□□□ 1.56
SDR39U1-208ENST00000554698 SCRN1Q12765 414 aa24.8■■□□□ 1.56
SDR39U1-208ENST00000554698 ME3Q16798 604 aa24.8■■□□□ 1.56
SDR39U1-208ENST00000554698 NOL8Q76FK4 1167 aaKnown RBP24.8■■□□□ 1.56
SDR39U1-208ENST00000554698 ANKRD35Q8N283 1001 aa24.8■■□□□ 1.56
SDR39U1-208ENST00000554698 LIMCH1Q9UPQ0 1083 aa24.8■■□□□ 1.56
SDR39U1-208ENST00000554698 MRPL11Q9Y3B7 192 aaKnown RBP24.8■■□□□ 1.56
SDR39U1-208ENST00000554698 PFASO15067 1338 aa24.8■■□□□ 1.56
SDR39U1-208ENST00000554698 hCG_1642624A0A1W2PR95 340 aa24.8■■□□□ 1.56
SDR39U1-208ENST00000554698 PGK2P07205 417 aa24.8■■□□□ 1.56
SDR39U1-208ENST00000554698 CYP2B6P20813 491 aa24.8■■□□□ 1.56
SDR39U1-208ENST00000554698 DPP9Q86TI2 863 aa24.8■■□□□ 1.56
SDR39U1-208ENST00000554698 RGS22Q8NE09 1264 aa24.8■■□□□ 1.56
SDR39U1-208ENST00000554698 PXYLP1Q8TE99 480 aa24.8■■□□□ 1.56
SDR39U1-208ENST00000554698 MAF1Q9H063 256 aa24.8■■□□□ 1.56
SDR39U1-208ENST00000554698 V9GY48 417 aaPredicted RBP24.8■■□□□ 1.56
SDR39U1-208ENST00000554698 ADCY3O60266 1144 aa24.79■■□□□ 1.56
SDR39U1-208ENST00000554698 ST18O60284 1047 aa24.79■■□□□ 1.56
SDR39U1-208ENST00000554698 LARGE1O95461 756 aa24.79■■□□□ 1.56
SDR39U1-208ENST00000554698 DDX11Q96FC9 970 aa24.79■■□□□ 1.56
SDR39U1-208ENST00000554698 SLC5A4Q9NY91 659 aa24.79■■□□□ 1.56
SDR39U1-208ENST00000554698 CYP39A1Q9NYL5 469 aa24.79■■□□□ 1.56
SDR39U1-208ENST00000554698 DOCK3Q8IZD9 2030 aa24.78■■□□□ 1.56
SDR39U1-208ENST00000554698 OPLAHO14841 1288 aa24.78■■□□□ 1.56
SDR39U1-208ENST00000554698 ZNF792Q3KQV3 632 aa24.78■■□□□ 1.56
SDR39U1-208ENST00000554698 NSMFQ6X4W1 530 aa24.78■■□□□ 1.56
SDR39U1-208ENST00000554698 SLAIN1Q8ND83 568 aa24.78■■□□□ 1.56
SDR39U1-208ENST00000554698 NPLOC4Q8TAT6 608 aa24.78■■□□□ 1.56
SDR39U1-208ENST00000554698 DIS3Q9Y2L1 958 aaKnown RBP24.78■■□□□ 1.56
SDR39U1-208ENST00000554698 BAZ2BQ9UIF8 2168 aaKnown RBP24.78■■□□□ 1.56
SDR39U1-208ENST00000554698 CPLX1O14810 134 aa24.77■■□□□ 1.56
SDR39U1-208ENST00000554698 PRPF3O43395 683 aaKnown RBP24.77■■□□□ 1.56
SDR39U1-208ENST00000554698 IGHA2P01877 340 aa24.77■■□□□ 1.56
SDR39U1-208ENST00000554698 GRK4P32298 578 aa24.77■■□□□ 1.56
SDR39U1-208ENST00000554698 MCF2L2Q86YR7 1114 aa24.77■■□□□ 1.56
SDR39U1-208ENST00000554698 TRMT44Q8IYL2 757 aaKnown RBP24.77■■□□□ 1.56
SDR39U1-208ENST00000554698 PHKBQ93100 1093 aa24.77■■□□□ 1.56
SDR39U1-208ENST00000554698 GTF3C6Q969F1 213 aa24.77■■□□□ 1.56
SDR39U1-208ENST00000554698 RNF26Q9BY78 433 aaPredicted RBP24.77■■□□□ 1.56
SDR39U1-208ENST00000554698 RBM27Q9P2N5 1060 aaKnown RBP24.77■■□□□ 1.56
SDR39U1-208ENST00000554698 ELNP15502 786 aa24.76■■□□□ 1.55
SDR39U1-208ENST00000554698 GHRHRQ02643 423 aa24.76■■□□□ 1.55
SDR39U1-208ENST00000554698 BAATQ14032 418 aaPredicted RBP24.76■■□□□ 1.55
SDR39U1-208ENST00000554698 CPLX2Q6PUV4 134 aaKnown RBP24.76■■□□□ 1.55
SDR39U1-208ENST00000554698 NECAB1Q8N987 351 aa24.76■■□□□ 1.55
SDR39U1-208ENST00000554698 FAM133AQ8N9E0 248 aa24.76■■□□□ 1.55
SDR39U1-208ENST00000554698 TRIB2Q92519 343 aa24.76■■□□□ 1.55
SDR39U1-208ENST00000554698 CCL14Q16627 93 aa24.75■■□□□ 1.55
SDR39U1-208ENST00000554698 PFKFB3Q16875 520 aaPredicted RBP24.75■■□□□ 1.55
SDR39U1-208ENST00000554698 SLC30A10Q6XR72 485 aa24.75■■□□□ 1.55
SDR39U1-208ENST00000554698 RNF207Q6ZRF8 634 aa24.75■■□□□ 1.55
SDR39U1-208ENST00000554698 MAML3Q96JK9 1138 aa24.75■■□□□ 1.55
SDR39U1-208ENST00000554698 ZSCAN31Q96LW9 406 aaPredicted RBP24.75■■□□□ 1.55
SDR39U1-208ENST00000554698 FLRT1Q9NZU1 646 aa24.75■■□□□ 1.55
SDR39U1-208ENST00000554698 SMCHD1A6NHR9 2005 aa24.74■■□□□ 1.55
SDR39U1-208ENST00000554698 POTEB2H3BUK9 544 aa24.74■■□□□ 1.55
SDR39U1-208ENST00000554698 hCG_1984214I3L0E3 225 aa24.74■■□□□ 1.55
SDR39U1-208ENST00000554698 CD2BP2O95400 341 aaKnown RBP24.74■■□□□ 1.55
SDR39U1-208ENST00000554698 RPS6P62753 249 aaKnown RBP24.74■■□□□ 1.55
SDR39U1-208ENST00000554698 CNTN2Q02246 1040 aa24.74■■□□□ 1.55
SDR39U1-208ENST00000554698 PKN1Q16512 942 aa24.74■■□□□ 1.55
SDR39U1-208ENST00000554698 SLC9C1Q4G0N8 1177 aa24.74■■□□□ 1.55
SDR39U1-208ENST00000554698 OLFML2BQ68BL8 750 aa24.74■■□□□ 1.55
SDR39U1-208ENST00000554698 WWC2Q6AWC2 1192 aa24.74■■□□□ 1.55
SDR39U1-208ENST00000554698 HEATR3Q7Z4Q2 680 aa24.74■■□□□ 1.55
SDR39U1-208ENST00000554698 ZNF713Q8N859 430 aaPredicted RBP24.74■■□□□ 1.55
SDR39U1-208ENST00000554698 GPKOWQ92917 476 aaPredicted RBP eCLIP24.74■■□□□ 1.55
SDR39U1-208ENST00000554698 FGD4Q96M96 766 aa24.74■■□□□ 1.55
SDR39U1-208ENST00000554698 SLC26A6Q9BXS9 759 aa24.74■■□□□ 1.55
SDR39U1-208ENST00000554698 PTPDC1A2A3K4 754 aa24.73■■□□□ 1.55
SDR39U1-208ENST00000554698 PPFIA3O75145 1194 aa24.73■■□□□ 1.55
SDR39U1-208ENST00000554698 CDKL5O76039 1030 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms