RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 MAF1Q9H063 256 aa22.24■■□□□ 1.15
DDX55-211ENST00000544429 SLC5A4Q9NY91 659 aa22.24■■□□□ 1.15
DDX55-211ENST00000544429 CYP46A1Q9Y6A2 500 aa22.24■■□□□ 1.15
DDX55-211ENST00000544429 NFIBO00712 420 aa22.23■■□□□ 1.15
DDX55-211ENST00000544429 ZBTB5O15062 677 aa22.23■■□□□ 1.15
DDX55-211ENST00000544429 SLC4A3P48751 1232 aa22.23■■□□□ 1.15
DDX55-211ENST00000544429 GNAQP50148 359 aa22.23■■□□□ 1.15
DDX55-211ENST00000544429 UBXN2AP68543 259 aa22.23■■□□□ 1.15
DDX55-211ENST00000544429 TOB2Q14106 344 aaPredicted RBP22.23■■□□□ 1.15
DDX55-211ENST00000544429 ZNF467Q7Z7K2 595 aaPredicted RBP22.23■■□□□ 1.15
DDX55-211ENST00000544429 MICU3Q86XE3 530 aa22.23■■□□□ 1.15
DDX55-211ENST00000544429 SRBD1Q8N5C6 995 aaKnown RBP22.23■■□□□ 1.15
DDX55-211ENST00000544429 BRF1Q92994 677 aa22.23■■□□□ 1.15
DDX55-211ENST00000544429 UPF3BQ9BZI7 483 aaKnown RBP22.23■■□□□ 1.15
DDX55-211ENST00000544429 PAK6Q9NQU5 681 aaPredicted RBP22.23■■□□□ 1.15
DDX55-211ENST00000544429 FAM217BQ9NTX9 383 aaPredicted RBP22.23■■□□□ 1.15
DDX55-211ENST00000544429 CYP39A1Q9NYL5 469 aa22.23■■□□□ 1.15
DDX55-211ENST00000544429 PFASO15067 1338 aa22.23■■□□□ 1.15
DDX55-211ENST00000544429 MCM3APO60318 1980 aa22.23■■□□□ 1.15
DDX55-211ENST00000544429 KLF18A0A0U1RQI7 1052 aa22.22■■□□□ 1.15
DDX55-211ENST00000544429 ZBTB43O43298 467 aa22.22■■□□□ 1.15
DDX55-211ENST00000544429 PLEKHA8P1O95397 391 aa22.22■■□□□ 1.15
DDX55-211ENST00000544429 CCL5P13501 91 aa22.22■■□□□ 1.15
DDX55-211ENST00000544429 FUT2Q10981 343 aa22.22■■□□□ 1.15
DDX55-211ENST00000544429 MAMDC4Q6UXC1 1216 aa22.22■■□□□ 1.15
DDX55-211ENST00000544429 TMTC3Q6ZXV5 915 aa22.22■■□□□ 1.15
DDX55-211ENST00000544429 ANKRD35Q8N283 1001 aa22.22■■□□□ 1.15
DDX55-211ENST00000544429 RGS22Q8NE09 1264 aa22.22■■□□□ 1.15
DDX55-211ENST00000544429 VAT1LQ9HCJ6 419 aa22.22■■□□□ 1.15
DDX55-211ENST00000544429 MKI67P46013 3256 aaKnown RBP22.21■■□□□ 1.15
DDX55-211ENST00000544429 GHRHRQ02643 423 aa22.21■■□□□ 1.15
DDX55-211ENST00000544429 CACNB2Q08289 660 aaPredicted RBP22.21■■□□□ 1.15
DDX55-211ENST00000544429 APOBRQ0VD83 1088 aa22.21■■□□□ 1.15
DDX55-211ENST00000544429 IFFO2Q5TF58 517 aa22.21■■□□□ 1.15
DDX55-211ENST00000544429 FBXO11Q86XK2 927 aa22.21■■□□□ 1.15
DDX55-211ENST00000544429 RAB11FIP4Q86YS3 637 aa22.21■■□□□ 1.15
DDX55-211ENST00000544429 MSL3Q8N5Y2 521 aaKnown RBP22.21■■□□□ 1.15
DDX55-211ENST00000544429 DDX11Q96FC9 970 aa22.21■■□□□ 1.15
DDX55-211ENST00000544429 PIGSQ96S52 555 aa22.21■■□□□ 1.15
DDX55-211ENST00000544429 UNC93B1Q9H1C4 597 aa22.21■■□□□ 1.15
DDX55-211ENST00000544429 ALDH8A1Q9H2A2 487 aaPredicted RBP22.21■■□□□ 1.15
DDX55-211ENST00000544429 BIN2Q9UBW5 565 aaPredicted RBP22.21■■□□□ 1.15
DDX55-211ENST00000544429 ASTN1O14525 1302 aa22.21■■□□□ 1.15
DDX55-211ENST00000544429 ABCB11O95342 1321 aa22.21■■□□□ 1.15
DDX55-211ENST00000544429 RPTORQ8N122 1335 aa22.21■■□□□ 1.15
DDX55-211ENST00000544429 PNMA6FA0A0J9YX94 578 aa22.2■■□□□ 1.14
DDX55-211ENST00000544429 OPLAHO14841 1288 aa22.2■■□□□ 1.14
DDX55-211ENST00000544429 DHX16O60231 1041 aaKnown RBP22.2■■□□□ 1.14
DDX55-211ENST00000544429 PRKAR2AP13861 404 aaKnown RBP22.2■■□□□ 1.14
DDX55-211ENST00000544429 SYNE3Q6ZMZ3 975 aa22.2■■□□□ 1.14
DDX55-211ENST00000544429 CCDC144CPQ8IYA2 1237 aa22.2■■□□□ 1.14
DDX55-211ENST00000544429 AMNQ9BXJ7 453 aa22.2■■□□□ 1.14
DDX55-211ENST00000544429 RBM28Q9NW13 759 aaKnown RBP22.2■■□□□ 1.14
DDX55-211ENST00000544429 FRMPD3Q5JV73 1810 aa22.2■■□□□ 1.14
DDX55-211ENST00000544429 POTEFA5A3E0 1075 aa22.19■■□□□ 1.14
DDX55-211ENST00000544429 GJB1P08034 283 aa22.19■■□□□ 1.14
DDX55-211ENST00000544429 CYBAP13498 195 aa22.19■■□□□ 1.14
DDX55-211ENST00000544429 CYP2C19P33261 490 aa22.19■■□□□ 1.14
DDX55-211ENST00000544429 CNTN2Q02246 1040 aa22.19■■□□□ 1.14
DDX55-211ENST00000544429 PPP2R5BQ15173 497 aa22.19■■□□□ 1.14
DDX55-211ENST00000544429 USH1GQ495M9 461 aa22.19■■□□□ 1.14
DDX55-211ENST00000544429 MFSD14CQ5VZR4 134 aa22.19■■□□□ 1.14
DDX55-211ENST00000544429 TINF2Q9BSI4 451 aa22.19■■□□□ 1.14
DDX55-211ENST00000544429 LRRC37A2A6NM11 1700 aa22.18■■□□□ 1.14
DDX55-211ENST00000544429 SYNGAP1Q96PV0 1343 aa22.18■■□□□ 1.14
DDX55-211ENST00000544429 SOWAHBA6NEL2 793 aa22.18■■□□□ 1.14
DDX55-211ENST00000544429 CDC27P30260 824 aa22.18■■□□□ 1.14
DDX55-211ENST00000544429 FGD1P98174 961 aa22.18■■□□□ 1.14
DDX55-211ENST00000544429 RTN1Q16799 776 aa22.18■■□□□ 1.14
DDX55-211ENST00000544429 CMTR1Q8N1G2 835 aaKnown RBP22.18■■□□□ 1.14
DDX55-211ENST00000544429 TRPV1Q8NER1 839 aa22.18■■□□□ 1.14
DDX55-211ENST00000544429 RNF208Q9H0X6 261 aa22.18■■□□□ 1.14
DDX55-211ENST00000544429 HMX1Q9NP08 348 aaPredicted RBP22.18■■□□□ 1.14
DDX55-211ENST00000544429 NRBP1Q9UHY1 535 aa22.18■■□□□ 1.14
DDX55-211ENST00000544429 CNTNAP5Q8WYK1 1306 aa22.17■■□□□ 1.14
DDX55-211ENST00000544429 POTEB2H3BUK9 544 aa22.17■■□□□ 1.14
DDX55-211ENST00000544429 PDIA3P30101 505 aaKnown RBP22.17■■□□□ 1.14
DDX55-211ENST00000544429 RGS19P49795 217 aa22.17■■□□□ 1.14
DDX55-211ENST00000544429 BAATQ14032 418 aaPredicted RBP22.17■■□□□ 1.14
DDX55-211ENST00000544429 NSMFQ6X4W1 530 aa22.17■■□□□ 1.14
DDX55-211ENST00000544429 HOMER1Q86YM7 354 aa22.17■■□□□ 1.14
DDX55-211ENST00000544429 KIF2CQ99661 725 aa22.17■■□□□ 1.14
DDX55-211ENST00000544429 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.17■■□□□ 1.14
DDX55-211ENST00000544429 MRPL11Q9Y3B7 192 aaKnown RBP22.17■■□□□ 1.14
DDX55-211ENST00000544429 GOLGA8AA7E2F4 631 aa22.16■■□□□ 1.14
DDX55-211ENST00000544429 GOLGA8BA8MQT2 603 aa22.16■■□□□ 1.14
DDX55-211ENST00000544429 MYCP01106 439 aaPredicted RBP22.16■■□□□ 1.14
DDX55-211ENST00000544429 CCND3P30281 292 aaPredicted RBP22.16■■□□□ 1.14
DDX55-211ENST00000544429 GJA8P48165 433 aa22.16■■□□□ 1.14
DDX55-211ENST00000544429 RBM25P49756 843 aaKnown RBP22.16■■□□□ 1.14
DDX55-211ENST00000544429 SOX10P56693 466 aa22.16■■□□□ 1.14
DDX55-211ENST00000544429 RPS6P62753 249 aaKnown RBP22.16■■□□□ 1.14
DDX55-211ENST00000544429 TRAF1Q13077 416 aa22.16■■□□□ 1.14
DDX55-211ENST00000544429 SLC30A10Q6XR72 485 aa22.16■■□□□ 1.14
DDX55-211ENST00000544429 RNF207Q6ZRF8 634 aa22.16■■□□□ 1.14
DDX55-211ENST00000544429 MORC4Q8TE76 937 aa22.16■■□□□ 1.14
DDX55-211ENST00000544429 RRP36Q96EU6 259 aaKnown RBP22.16■■□□□ 1.14
DDX55-211ENST00000544429 ZNF274Q96GC6 653 aaPredicted RBP22.16■■□□□ 1.14
DDX55-211ENST00000544429 TMEM106CQ9BVX2 250 aa22.16■■□□□ 1.14
DDX55-211ENST00000544429 CRISPLD2Q9H0B8 497 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms