RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 RABGAP1Q9Y3P9 1069 aa17.5■□□□□ 0.39
PPFIA1-222ENST00000532504 TNNI1P19237 187 aa17.5■□□□□ 0.39
PPFIA1-222ENST00000532504 SYMPKQ92797 1274 aaKnown RBP17.5■□□□□ 0.39
PPFIA1-222ENST00000532504 PRKAG2Q9UGJ0 569 aa17.5■□□□□ 0.39
PPFIA1-222ENST00000532504 CEP83Q9Y592 693 aa17.5■□□□□ 0.39
PPFIA1-222ENST00000532504 PPM1FP49593 454 aaPredicted RBP17.5■□□□□ 0.39
PPFIA1-222ENST00000532504 LIG4P49917 911 aa17.5■□□□□ 0.39
PPFIA1-222ENST00000532504 ALX1Q15699 326 aa17.5■□□□□ 0.39
PPFIA1-222ENST00000532504 HACE1Q8IYU2 909 aa17.5■□□□□ 0.39
PPFIA1-222ENST00000532504 CDHR1Q96JP9 859 aa17.5■□□□□ 0.39
PPFIA1-222ENST00000532504 FOXP1Q9H334 677 aaPredicted RBP17.5■□□□□ 0.39
PPFIA1-222ENST00000532504 TMEM110-MUSTN1A8MSY1 372 aa17.49■□□□□ 0.39
PPFIA1-222ENST00000532504 STAT3P40763 770 aa17.49■□□□□ 0.39
PPFIA1-222ENST00000532504 FAM178BQ8IXR5 827 aa17.49■□□□□ 0.39
PPFIA1-222ENST00000532504 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.49■□□□□ 0.39
PPFIA1-222ENST00000532504 FBXO40Q9UH90 709 aa17.49■□□□□ 0.39
PPFIA1-222ENST00000532504 CLSTN2Q9H4D0 955 aa17.49■□□□□ 0.39
PPFIA1-222ENST00000532504 RRAGCQ9HB90 399 aa17.49■□□□□ 0.39
PPFIA1-222ENST00000532504 KIF20BQ96Q89 1820 aa17.49■□□□□ 0.39
PPFIA1-222ENST00000532504 hCG_1984214I3L0E3 225 aa17.49■□□□□ 0.39
PPFIA1-222ENST00000532504 CSPG5O95196 566 aa17.49■□□□□ 0.39
PPFIA1-222ENST00000532504 MMP1P03956 469 aa17.49■□□□□ 0.39
PPFIA1-222ENST00000532504 UVSSAQ2YD98 709 aa17.49■□□□□ 0.39
PPFIA1-222ENST00000532504 MIS18BP1Q6P0N0 1132 aa17.49■□□□□ 0.39
PPFIA1-222ENST00000532504 TRMT44Q8IYL2 757 aaKnown RBP17.49■□□□□ 0.39
PPFIA1-222ENST00000532504 ZNF713Q8N859 430 aaPredicted RBP17.49■□□□□ 0.39
PPFIA1-222ENST00000532504 TNPO2O14787 897 aaKnown RBP17.49■□□□□ 0.39
PPFIA1-222ENST00000532504 PPP1R2P41236 205 aa17.49■□□□□ 0.39
PPFIA1-222ENST00000532504 ADALQ6DHV7 355 aa17.49■□□□□ 0.39
PPFIA1-222ENST00000532504 SLC7A3Q8WY07 619 aa17.49■□□□□ 0.39
PPFIA1-222ENST00000532504 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.48■□□□□ 0.39
PPFIA1-222ENST00000532504 ZEB2O60315 1214 aa17.48■□□□□ 0.39
PPFIA1-222ENST00000532504 CASQ1P31415 396 aa17.48■□□□□ 0.39
PPFIA1-222ENST00000532504 CYLC1P35663 651 aaPredicted RBP17.48■□□□□ 0.39
PPFIA1-222ENST00000532504 CACNB1Q02641 598 aaPredicted RBP17.48■□□□□ 0.39
PPFIA1-222ENST00000532504 NBPF9Q3BBW0 867 aa17.48■□□□□ 0.39
PPFIA1-222ENST00000532504 CEP170P1Q96L14 293 aa17.48■□□□□ 0.39
PPFIA1-222ENST00000532504 ZNF280CQ8ND82 737 aa17.48■□□□□ 0.39
PPFIA1-222ENST00000532504 ADPGKQ9BRR6 497 aa17.48■□□□□ 0.39
PPFIA1-222ENST00000532504 LARSQ9P2J5 1176 aaKnown RBP17.48■□□□□ 0.39
PPFIA1-222ENST00000532504 ANKFY1Q9P2R3 1169 aa17.48■□□□□ 0.39
PPFIA1-222ENST00000532504 PCDHA7Q9UN72 937 aa17.48■□□□□ 0.39
PPFIA1-222ENST00000532504 SYNRGQ9UMZ2 1314 aa17.48■□□□□ 0.39
PPFIA1-222ENST00000532504 COL3A1P02461 1466 aaPredicted RBP17.48■□□□□ 0.39
PPFIA1-222ENST00000532504 KIF4AO95239 1232 aa17.48■□□□□ 0.39
PPFIA1-222ENST00000532504 MTERF2Q49AM1 385 aa17.48■□□□□ 0.39
PPFIA1-222ENST00000532504 CCDC186Q7Z3E2 898 aa17.48■□□□□ 0.39
PPFIA1-222ENST00000532504 SESTD1Q86VW0 696 aa17.48■□□□□ 0.39
PPFIA1-222ENST00000532504 ZNF830Q96NB3 372 aaPredicted RBP17.48■□□□□ 0.39
PPFIA1-222ENST00000532504 FTOQ9C0B1 505 aaKnown RBP eCLIP17.48■□□□□ 0.39
PPFIA1-222ENST00000532504 QRICH1Q2TAL8 776 aa17.47■□□□□ 0.39
PPFIA1-222ENST00000532504 MAP1SQ66K74 1059 aaPredicted RBP17.47■□□□□ 0.39
PPFIA1-222ENST00000532504 TTBK2Q6IQ55 1244 aa17.47■□□□□ 0.39
PPFIA1-222ENST00000532504 MB21D2Q8IYB1 491 aaPredicted RBP17.47■□□□□ 0.39
PPFIA1-222ENST00000532504 ZKSCAN4Q969J2 545 aaPredicted RBP17.47■□□□□ 0.39
PPFIA1-222ENST00000532504 CCDC42Q96M95 316 aa17.47■□□□□ 0.39
PPFIA1-222ENST00000532504 C16orf45Q96MC5 204 aaPredicted RBP17.47■□□□□ 0.39
PPFIA1-222ENST00000532504 CSRNP2Q9H175 543 aa17.47■□□□□ 0.39
PPFIA1-222ENST00000532504 ADARB2Q9NS39 739 aaKnown RBP17.47■□□□□ 0.39
PPFIA1-222ENST00000532504 MYL3P08590 195 aa17.47■□□□□ 0.39
PPFIA1-222ENST00000532504 DMP1Q13316 513 aaPredicted RBP17.47■□□□□ 0.39
PPFIA1-222ENST00000532504 PDXDC2PQ6P474 469 aa17.47■□□□□ 0.39
PPFIA1-222ENST00000532504 LY9Q9HBG7 655 aa17.47■□□□□ 0.39
PPFIA1-222ENST00000532504 PANK4Q9NVE7 773 aa17.47■□□□□ 0.39
PPFIA1-222ENST00000532504 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.47■□□□□ 0.39
PPFIA1-222ENST00000532504 FAM170AA1A519 330 aa17.47■□□□□ 0.39
PPFIA1-222ENST00000532504 INO80B-WBP1J3KQ70 363 aa17.47■□□□□ 0.39
PPFIA1-222ENST00000532504 PAFAH1B1P43034 410 aa17.47■□□□□ 0.39
PPFIA1-222ENST00000532504 SNAPC2Q13487 334 aa17.47■□□□□ 0.39
PPFIA1-222ENST00000532504 TICAM2Q86XR7 235 aa17.47■□□□□ 0.39
PPFIA1-222ENST00000532504 ADGRF4Q8IZF3 695 aa17.47■□□□□ 0.39
PPFIA1-222ENST00000532504 NELFBQ8WX92 580 aa17.47■□□□□ 0.39
PPFIA1-222ENST00000532504 MMP19Q99542 508 aa17.47■□□□□ 0.39
PPFIA1-222ENST00000532504 WDR11Q9BZH6 1224 aa17.47■□□□□ 0.39
PPFIA1-222ENST00000532504 INO80BQ9C086 356 aaPredicted RBP17.47■□□□□ 0.39
PPFIA1-222ENST00000532504 VEGFAP15692 232 aaPredicted RBP17.47■□□□□ 0.39
PPFIA1-222ENST00000532504 KIF23Q02241 960 aaPredicted RBP17.47■□□□□ 0.39
PPFIA1-222ENST00000532504 NFIAQ12857 509 aa17.47■□□□□ 0.39
PPFIA1-222ENST00000532504 JADE2Q9NQC1 790 aa17.47■□□□□ 0.39
PPFIA1-222ENST00000532504 FCER1AP12319 257 aa17.46■□□□□ 0.39
PPFIA1-222ENST00000532504 PCDHA6Q9UN73 950 aa17.46■□□□□ 0.39
PPFIA1-222ENST00000532504 PCDHA8Q9Y5H6 950 aa17.46■□□□□ 0.39
PPFIA1-222ENST00000532504 ODR4Q5SWX8 454 aa17.46■□□□□ 0.39
PPFIA1-222ENST00000532504 STAG2Q8N3U4 1231 aa17.46■□□□□ 0.39
PPFIA1-222ENST00000532504 SLC39A2Q9NP94 309 aa17.46■□□□□ 0.39
PPFIA1-222ENST00000532504 LUC7L2Q9Y383 392 aaKnown RBP17.46■□□□□ 0.39
PPFIA1-222ENST00000532504 CCL15-CCL14A0A0B4J2E2 113 aa17.46■□□□□ 0.39
PPFIA1-222ENST00000532504 PALM3A6NDB9 673 aaPredicted RBP17.46■□□□□ 0.39
PPFIA1-222ENST00000532504 GCFC2P16383 781 aaKnown RBP17.46■□□□□ 0.39
PPFIA1-222ENST00000532504 STXBP2Q15833 593 aa17.46■□□□□ 0.39
PPFIA1-222ENST00000532504 CCL15Q16663 113 aa17.46■□□□□ 0.39
PPFIA1-222ENST00000532504 RSPH3Q86UC2 560 aa17.46■□□□□ 0.39
PPFIA1-222ENST00000532504 PXDNLA1KZ92 1463 aa17.46■□□□□ 0.39
PPFIA1-222ENST00000532504 TAF3Q5VWG9 929 aa17.46■□□□□ 0.38
PPFIA1-222ENST00000532504 KCNG1Q9UIX4 513 aa17.46■□□□□ 0.38
PPFIA1-222ENST00000532504 GPR75-ASB3A0A0A6YYF3 556 aa17.45■□□□□ 0.38
PPFIA1-222ENST00000532504 CD19P15391 556 aa17.45■□□□□ 0.38
PPFIA1-222ENST00000532504 FAM193AP78312 1265 aa17.45■□□□□ 0.38
PPFIA1-222ENST00000532504 LRMPQ12912 555 aa17.45■□□□□ 0.38
PPFIA1-222ENST00000532504 ZNF512BQ96KM6 892 aaPredicted RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 166.3 ms