RNA–Protein interactions for RNA: ENST00000530620.5

C11orf54-209, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 5

Gene C11orf54, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-209ENST00000530620 KIFC2Q96AC6 838 aa12.7□□□□□ -0.38
C11orf54-209ENST00000530620 FGD4Q96M96 766 aa12.7□□□□□ -0.38
C11orf54-209ENST00000530620 RAVER2Q9HCJ3 691 aaKnown RBP12.7□□□□□ -0.38
C11orf54-209ENST00000530620 ZHX1Q9UKY1 873 aaPredicted RBP12.7□□□□□ -0.38
C11orf54-209ENST00000530620 UNC80Q8N2C7 3258 aa12.7□□□□□ -0.38
C11orf54-209ENST00000530620 TTC41PQ6P2S7 1318 aa12.69□□□□□ -0.38
C11orf54-209ENST00000530620 SYNGAP1Q96PV0 1343 aa12.69□□□□□ -0.38
C11orf54-209ENST00000530620 ATP2A1O14983 1001 aa12.69□□□□□ -0.38
C11orf54-209ENST00000530620 PQBP1O60828 265 aaKnown RBP12.69□□□□□ -0.38
C11orf54-209ENST00000530620 CLTBP09497 229 aa12.69□□□□□ -0.38
C11orf54-209ENST00000530620 PROX2Q3B8N5 592 aa12.69□□□□□ -0.38
C11orf54-209ENST00000530620 ZNF697Q5TEC3 545 aa12.69□□□□□ -0.38
C11orf54-209ENST00000530620 IFNL3Q8IZI9 196 aa12.69□□□□□ -0.38
C11orf54-209ENST00000530620 ZNF444Q8N0Y2 327 aaPredicted RBP12.69□□□□□ -0.38
C11orf54-209ENST00000530620 GMCL1P1Q8NEA9 526 aa12.69□□□□□ -0.38
C11orf54-209ENST00000530620 PI4K2BQ8TCG2 481 aa12.69□□□□□ -0.38
C11orf54-209ENST00000530620 DDX11Q96FC9 970 aa12.69□□□□□ -0.38
C11orf54-209ENST00000530620 SLC38A10Q9HBR0 1119 aa12.69□□□□□ -0.38
C11orf54-209ENST00000530620 MTMR4Q9NYA4 1195 aa12.69□□□□□ -0.38
C11orf54-209ENST00000530620 MYADML2A6NDP7 307 aa12.68□□□□□ -0.38
C11orf54-209ENST00000530620 ADCY6O43306 1168 aa12.68□□□□□ -0.38
C11orf54-209ENST00000530620 TTLL1O95922 423 aa12.68□□□□□ -0.38
C11orf54-209ENST00000530620 EPHB4P54760 987 aa12.68□□□□□ -0.38
C11orf54-209ENST00000530620 MAMDC4Q6UXC1 1216 aa12.68□□□□□ -0.38
C11orf54-209ENST00000530620 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.68□□□□□ -0.38
C11orf54-209ENST00000530620 MSL3Q8N5Y2 521 aaKnown RBP12.68□□□□□ -0.38
C11orf54-209ENST00000530620 MKL1Q969V6 931 aa12.68□□□□□ -0.38
C11orf54-209ENST00000530620 FSD1Q9BTV5 496 aa12.68□□□□□ -0.38
C11orf54-209ENST00000530620 ZNF287Q9HBT7 754 aa12.68□□□□□ -0.38
C11orf54-209ENST00000530620 FEM1BQ9UK73 627 aa12.68□□□□□ -0.38
C11orf54-209ENST00000530620 SYNPO2Q9UMS6 1093 aa12.68□□□□□ -0.38
C11orf54-209ENST00000530620 CTDP1Q9Y5B0 961 aaPredicted RBP12.68□□□□□ -0.38
C11orf54-209ENST00000530620 PCDHB15Q9Y5E8 787 aa12.68□□□□□ -0.38
C11orf54-209ENST00000530620 EYSQ5T1H1 3165 aa12.68□□□□□ -0.38
C11orf54-209ENST00000530620 LAMA4Q16363 1823 aa12.67□□□□□ -0.38
C11orf54-209ENST00000530620 PATL2C9JE40 543 aaKnown RBP12.67□□□□□ -0.38
C11orf54-209ENST00000530620 KIAA0355O15063 1070 aa12.67□□□□□ -0.38
C11orf54-209ENST00000530620 FOXP2O15409 715 aa12.67□□□□□ -0.38
C11orf54-209ENST00000530620 HRO43593 1189 aa12.67□□□□□ -0.38
C11orf54-209ENST00000530620 ZBED4O75132 1171 aa12.67□□□□□ -0.38
C11orf54-209ENST00000530620 TSPY3P0CV98 308 aa12.67□□□□□ -0.38
C11orf54-209ENST00000530620 TSPY8P0CW00 308 aa12.67□□□□□ -0.38
C11orf54-209ENST00000530620 ACLYP53396 1101 aa12.67□□□□□ -0.38
C11orf54-209ENST00000530620 PPARAQ07869 468 aa12.67□□□□□ -0.38
C11orf54-209ENST00000530620 LRRFIP1Q32MZ4 808 aaKnown RBP12.67□□□□□ -0.38
C11orf54-209ENST00000530620 ZMYM1Q5SVZ6 1142 aa12.67□□□□□ -0.38
C11orf54-209ENST00000530620 SLFN13Q68D06 897 aa12.67□□□□□ -0.38
C11orf54-209ENST00000530620 KLHDC9Q8NEP7 349 aa12.67□□□□□ -0.38
C11orf54-209ENST00000530620 NEDD1Q8NHV4 660 aa12.67□□□□□ -0.38
C11orf54-209ENST00000530620 TSEN34Q9BSV6 310 aaKnown RBP12.67□□□□□ -0.38
C11orf54-209ENST00000530620 NAPBQ9H115 298 aa12.67□□□□□ -0.38
C11orf54-209ENST00000530620 NPDC1Q9NQX5 325 aaPredicted RBP12.67□□□□□ -0.38
C11orf54-209ENST00000530620 STARD7Q9NQZ5 370 aa12.67□□□□□ -0.38
C11orf54-209ENST00000530620 HOMER2Q9NSB8 354 aa12.67□□□□□ -0.38
C11orf54-209ENST00000530620 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.67□□□□□ -0.38
C11orf54-209ENST00000530620 FAM184BQ9ULE4 1060 aa12.67□□□□□ -0.38
C11orf54-209ENST00000530620 TACC3Q9Y6A5 838 aa12.67□□□□□ -0.38
C11orf54-209ENST00000530620 ERC2O15083 957 aa12.66□□□□□ -0.38
C11orf54-209ENST00000530620 DUSP11O75319 330 aaKnown RBP12.66□□□□□ -0.38
C11orf54-209ENST00000530620 BMP3P12645 472 aa12.66□□□□□ -0.38
C11orf54-209ENST00000530620 RAG1P15918 1043 aa12.66□□□□□ -0.38
C11orf54-209ENST00000530620 OAZ1P54368 228 aa12.66□□□□□ -0.38
C11orf54-209ENST00000530620 TFAP4Q01664 338 aa12.66□□□□□ -0.38
C11orf54-209ENST00000530620 PDE4BQ07343 736 aa12.66□□□□□ -0.38
C11orf54-209ENST00000530620 FAAP100Q0VG06 881 aa12.66□□□□□ -0.38
C11orf54-209ENST00000530620 PTGDRQ13258 359 aa12.66□□□□□ -0.38
C11orf54-209ENST00000530620 KCNA10Q16322 511 aa12.66□□□□□ -0.38
C11orf54-209ENST00000530620 CCSAPQ6IQ19 270 aaPredicted RBP12.66□□□□□ -0.38
C11orf54-209ENST00000530620 CCDC129Q6ZRS4 1044 aa12.66□□□□□ -0.38
C11orf54-209ENST00000530620 ARMCX2Q7L311 632 aa12.66□□□□□ -0.38
C11orf54-209ENST00000530620 RASGRP2Q7LDG7 609 aa12.66□□□□□ -0.38
C11orf54-209ENST00000530620 ANKRD35Q8N283 1001 aa12.66□□□□□ -0.38
C11orf54-209ENST00000530620 CHMP4CQ96CF2 233 aa12.66□□□□□ -0.38
C11orf54-209ENST00000530620 RNPC3Q96LT9 517 aaKnown RBP12.66□□□□□ -0.38
C11orf54-209ENST00000530620 NACAP1Q9BZK3 213 aa12.66□□□□□ -0.38
C11orf54-209ENST00000530620 TTYH1Q9H313 450 aaPredicted RBP12.66□□□□□ -0.38
C11orf54-209ENST00000530620 FBXO40Q9UH90 709 aa12.66□□□□□ -0.38
C11orf54-209ENST00000530620 ISY1Q9ULR0 285 aaKnown RBP12.66□□□□□ -0.38
C11orf54-209ENST00000530620 SALL3Q9BXA9 1300 aa12.65□□□□□ -0.38
C11orf54-209ENST00000530620 MYH6P13533 1939 aa12.65□□□□□ -0.38
C11orf54-209ENST00000530620 MOXD2PA6NHM9 499 aa12.65□□□□□ -0.38
C11orf54-209ENST00000530620 TRIM6-TRIM34B2RNG4 842 aa12.65□□□□□ -0.38
C11orf54-209ENST00000530620 TMEM232C9JQI7 657 aa12.65□□□□□ -0.38
C11orf54-209ENST00000530620 C6orf222P0C671 652 aaPredicted RBP12.65□□□□□ -0.38
C11orf54-209ENST00000530620 MX1P20591 662 aa12.65□□□□□ -0.38
C11orf54-209ENST00000530620 CST5P28325 142 aaPredicted RBP12.65□□□□□ -0.38
C11orf54-209ENST00000530620 STAT2P52630 851 aa12.65□□□□□ -0.38
C11orf54-209ENST00000530620 SMAD3P84022 425 aaKnown RBP12.65□□□□□ -0.38
C11orf54-209ENST00000530620 CNTN2Q02246 1040 aa12.65□□□□□ -0.38
C11orf54-209ENST00000530620 FPGSQ05932 587 aa12.65□□□□□ -0.38
C11orf54-209ENST00000530620 ACVR2BQ13705 512 aa12.65□□□□□ -0.38
C11orf54-209ENST00000530620 CCDC144BQ3MJ40 725 aa12.65□□□□□ -0.38
C11orf54-209ENST00000530620 ANKRD33Q7Z3H0 272 aa12.65□□□□□ -0.38
C11orf54-209ENST00000530620 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.65□□□□□ -0.38
C11orf54-209ENST00000530620 CCDC144CPQ8IYA2 1237 aa12.65□□□□□ -0.38
C11orf54-209ENST00000530620 CHST13Q8NET6 341 aa12.65□□□□□ -0.38
C11orf54-209ENST00000530620 NUP133Q8WUM0 1156 aa12.65□□□□□ -0.38
C11orf54-209ENST00000530620 GMCL1Q96IK5 515 aa12.65□□□□□ -0.38
C11orf54-209ENST00000530620 CDX2Q99626 313 aaPredicted RBP12.65□□□□□ -0.38
C11orf54-209ENST00000530620 KATNBL1Q9H079 304 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms