RNA–Protein interactions for RNA: ENST00000520580.5

SREK1-208, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 2

Gene SREK1, Length 2,369 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-208	ENST00000520580	SERPINB3	P29508	390 aa		4.61	□□□□□ -1.67
SREK1-208	ENST00000520580	SAFB	Q15424	915 aa	Known RBP eCLIP	4.61	□□□□□ -1.67
SREK1-208	ENST00000520580	INO80D	Q53TQ3	878 aa	Predicted RBP	4.61	□□□□□ -1.67
SREK1-208	ENST00000520580	DDX53	Q86TM3	631 aa	Known RBP	4.61	□□□□□ -1.67
SREK1-208	ENST00000520580	IFNL3	Q8IZI9	196 aa		4.61	□□□□□ -1.67
SREK1-208	ENST00000520580	PAF1	Q8N7H5	531 aa		4.61	□□□□□ -1.67
SREK1-208	ENST00000520580	CLRN3	Q8NCR9	226 aa		4.61	□□□□□ -1.67
SREK1-208	ENST00000520580	RNF214	Q8ND24	703 aa		4.61	□□□□□ -1.67
SREK1-208	ENST00000520580	PNISR	Q8TF01	805 aa	Known RBP	4.61	□□□□□ -1.67
SREK1-208	ENST00000520580	WNT8B	Q93098	351 aa		4.61	□□□□□ -1.67
SREK1-208	ENST00000520580	GMCL1	Q96IK5	515 aa		4.61	□□□□□ -1.67
SREK1-208	ENST00000520580	BCCIP	Q9P287	314 aa	Known RBP eCLIP	4.61	□□□□□ -1.67
SREK1-208	ENST00000520580	PUF60	Q9UHX1	559 aa	Known RBP	4.61	□□□□□ -1.67
SREK1-208	ENST00000520580	ZKSCAN5	Q9Y2L8	839 aa		4.61	□□□□□ -1.67
SREK1-208	ENST00000520580	PCDHB12	Q9Y5F1	795 aa		4.61	□□□□□ -1.67
SREK1-208	ENST00000520580	RASSF10	A6NK89	507 aa		4.6	□□□□□ -1.67
SREK1-208	ENST00000520580	HMGB1P1	B2RPK0	211 aa	Predicted RBP	4.6	□□□□□ -1.67
SREK1-208	ENST00000520580	TRAF5	O00463	557 aa		4.6	□□□□□ -1.67
SREK1-208	ENST00000520580	DRD2	P14416	443 aa		4.6	□□□□□ -1.67
SREK1-208	ENST00000520580	SCAND1	P57086	179 aa		4.6	□□□□□ -1.67
SREK1-208	ENST00000520580	CYP4F3	Q08477	520 aa		4.6	□□□□□ -1.67
SREK1-208	ENST00000520580	SCRN1	Q12765	414 aa		4.6	□□□□□ -1.67
SREK1-208	ENST00000520580	MAP4K2	Q12851	820 aa		4.6	□□□□□ -1.67
SREK1-208	ENST00000520580	SUZ12	Q15022	739 aa	Known RBP	4.6	□□□□□ -1.67
SREK1-208	ENST00000520580	CLUL1	Q15846	466 aa		4.6	□□□□□ -1.67
SREK1-208	ENST00000520580	ANKRD39	Q53RE8	183 aa		4.6	□□□□□ -1.67
SREK1-208	ENST00000520580	ANO1	Q5XXA6	986 aa		4.6	□□□□□ -1.67
SREK1-208	ENST00000520580	STYK1	Q6J9G0	422 aa		4.6	□□□□□ -1.67
SREK1-208	ENST00000520580	WFDC8	Q8IUA0	241 aa		4.6	□□□□□ -1.67
SREK1-208	ENST00000520580	UBASH3B	Q8TF42	649 aa		4.6	□□□□□ -1.67
SREK1-208	ENST00000520580	PPP1R13L	Q8WUF5	828 aa		4.6	□□□□□ -1.67
SREK1-208	ENST00000520580	CRIM1	Q9NZV1	1036 aa		4.6	□□□□□ -1.67
SREK1-208	ENST00000520580	RCAN3	Q9UKA8	241 aa		4.6	□□□□□ -1.67
SREK1-208	ENST00000520580	ANKRD6	Q9Y2G4	727 aa		4.6	□□□□□ -1.67
SREK1-208	ENST00000520580	STARD13	Q9Y3M8	1113 aa		4.6	□□□□□ -1.67
SREK1-208	ENST00000520580	FZD9	O00144	591 aa		4.6	□□□□□ -1.67
SREK1-208	ENST00000520580	STXBP3	O00186	592 aa		4.6	□□□□□ -1.67
SREK1-208	ENST00000520580	CBX4	O00257	560 aa		4.6	□□□□□ -1.67
SREK1-208	ENST00000520580	AQP7	O14520	342 aa		4.6	□□□□□ -1.67
SREK1-208	ENST00000520580	TM4SF5	O14894	197 aa		4.6	□□□□□ -1.67
SREK1-208	ENST00000520580	IL33	O95760	270 aa		4.6	□□□□□ -1.67
SREK1-208	ENST00000520580	APP	P05067	770 aa		4.6	□□□□□ -1.67
SREK1-208	ENST00000520580	ASGR2	P07307	311 aa		4.6	□□□□□ -1.67
SREK1-208	ENST00000520580	ALAS2	P22557	587 aa		4.6	□□□□□ -1.67
SREK1-208	ENST00000520580	HOXC12	P31275	282 aa		4.6	□□□□□ -1.67
SREK1-208	ENST00000520580	KLF1	Q13351	362 aa	Predicted RBP	4.6	□□□□□ -1.67
SREK1-208	ENST00000520580	GALE	Q14376	348 aa		4.6	□□□□□ -1.67
SREK1-208	ENST00000520580	FAM83B	Q5T0W9	1011 aa		4.6	□□□□□ -1.67
SREK1-208	ENST00000520580	SLC35F1	Q5T1Q4	408 aa		4.6	□□□□□ -1.67
SREK1-208	ENST00000520580	ERAP2	Q6P179	960 aa		4.6	□□□□□ -1.67
SREK1-208	ENST00000520580	KLHL23	Q8NBE8	558 aa		4.6	□□□□□ -1.67
SREK1-208	ENST00000520580	MYRIP	Q8NFW9	859 aa		4.6	□□□□□ -1.67
SREK1-208	ENST00000520580	TTC9	Q92623	222 aa		4.6	□□□□□ -1.67
SREK1-208	ENST00000520580	ISL2	Q96A47	359 aa		4.6	□□□□□ -1.67
SREK1-208	ENST00000520580	FAXDC2	Q96IV6	333 aa		4.6	□□□□□ -1.67
SREK1-208	ENST00000520580	SCYL1	Q96KG9	808 aa		4.6	□□□□□ -1.67
SREK1-208	ENST00000520580	KREMEN1	Q96MU8	473 aa		4.6	□□□□□ -1.67
SREK1-208	ENST00000520580	MDFI	Q99750	246 aa		4.6	□□□□□ -1.67
SREK1-208	ENST00000520580	PHF20	Q9BVI0	1012 aa		4.6	□□□□□ -1.67
SREK1-208	ENST00000520580	MKS1	Q9NXB0	559 aa		4.6	□□□□□ -1.67
SREK1-208	ENST00000520580	GFOD1	Q9NXC2	390 aa		4.6	□□□□□ -1.67
SREK1-208	ENST00000520580	GDF2	Q9UK05	429 aa	Predicted RBP	4.6	□□□□□ -1.67
SREK1-208	ENST00000520580		M0R082	166 aa		4.59	□□□□□ -1.67
SREK1-208	ENST00000520580	PMM2	O15305	246 aa		4.59	□□□□□ -1.67
SREK1-208	ENST00000520580	LILRB5	O75023	590 aa		4.59	□□□□□ -1.67
SREK1-208	ENST00000520580	RECQL	P46063	649 aa	Predicted RBP	4.59	□□□□□ -1.67
SREK1-208	ENST00000520580	HTRA3	P83110	453 aa		4.59	□□□□□ -1.67
SREK1-208	ENST00000520580	RAPGEF1	Q13905	1077 aa		4.59	□□□□□ -1.67
SREK1-208	ENST00000520580	DDB1	Q16531	1140 aa		4.59	□□□□□ -1.67
SREK1-208	ENST00000520580	NBPF9	Q3BBW0	867 aa		4.59	□□□□□ -1.67
SREK1-208	ENST00000520580	INAVA	Q3KP66	663 aa		4.59	□□□□□ -1.67
SREK1-208	ENST00000520580	ACBD5	Q5T8D3	534 aa	Predicted RBP	4.59	□□□□□ -1.67
SREK1-208	ENST00000520580	WDR78	Q5VTH9	848 aa		4.59	□□□□□ -1.67
SREK1-208	ENST00000520580	MSL1	Q68DK7	614 aa		4.59	□□□□□ -1.67
SREK1-208	ENST00000520580	CDH24	Q86UP0	819 aa		4.59	□□□□□ -1.67
SREK1-208	ENST00000520580	PPIL6	Q8IXY8	311 aa		4.59	□□□□□ -1.67
SREK1-208	ENST00000520580	C1orf162	Q8NEQ5	155 aa	Predicted RBP	4.59	□□□□□ -1.67
SREK1-208	ENST00000520580	ZNF417	Q8TAU3	575 aa		4.59	□□□□□ -1.67
SREK1-208	ENST00000520580	ZNF587	Q96SQ5	575 aa	Predicted RBP	4.59	□□□□□ -1.67
SREK1-208	ENST00000520580	NAP1L4	Q99733	375 aa	Known RBP	4.59	□□□□□ -1.67
SREK1-208	ENST00000520580	MENT	Q9BUN1	341 aa		4.59	□□□□□ -1.67
SREK1-208	ENST00000520580	CABP5	Q9NP86	173 aa		4.59	□□□□□ -1.67
SREK1-208	ENST00000520580	NBN	O60934	754 aa		4.58	□□□□□ -1.68
SREK1-208	ENST00000520580	H2AFY	O75367	372 aa	Known RBP	4.58	□□□□□ -1.68
SREK1-208	ENST00000520580	FGA	P02671	866 aa		4.58	□□□□□ -1.68
SREK1-208	ENST00000520580	LTF	P02788	710 aa		4.58	□□□□□ -1.68
SREK1-208	ENST00000520580	ATP2A2	P16615	1042 aa	Known RBP	4.58	□□□□□ -1.68
SREK1-208	ENST00000520580	CD68	P34810	354 aa	Predicted RBP	4.58	□□□□□ -1.68
SREK1-208	ENST00000520580	SMCP	P49901	116 aa	Predicted RBP	4.58	□□□□□ -1.68
SREK1-208	ENST00000520580	KPNA1	P52294	538 aa	Predicted RBP	4.58	□□□□□ -1.68
SREK1-208	ENST00000520580	AMPD2	Q01433	879 aa		4.58	□□□□□ -1.68
SREK1-208	ENST00000520580	MORC3	Q14149	939 aa		4.58	□□□□□ -1.68
SREK1-208	ENST00000520580	DYM	Q7RTS9	669 aa		4.58	□□□□□ -1.68
SREK1-208	ENST00000520580	C11orf74	Q86VG3	221 aa		4.58	□□□□□ -1.68
SREK1-208	ENST00000520580	DMRTC2	Q8IXT2	367 aa	Predicted RBP	4.58	□□□□□ -1.68
SREK1-208	ENST00000520580	CACTIN-AS1	Q8N1I8	211 aa		4.58	□□□□□ -1.68
SREK1-208	ENST00000520580	PPM1E	Q8WY54	764 aa		4.58	□□□□□ -1.68
SREK1-208	ENST00000520580	HSPBAP1	Q96EW2	488 aa		4.58	□□□□□ -1.68
SREK1-208	ENST00000520580	DSCC1	Q9BVC3	393 aa		4.58	□□□□□ -1.68
SREK1-208	ENST00000520580	PRDM14	Q9GZV8	571 aa		4.58	□□□□□ -1.68

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