RNA–Protein interactions for RNA: ENST00000503842.5

PRDM2-213, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-213ENST00000503842 ZNF713Q8N859 430 aaPredicted RBP15.37■□□□□ 0.05
PRDM2-213ENST00000503842 GPKOWQ92917 476 aaPredicted RBP eCLIP15.37■□□□□ 0.05
PRDM2-213ENST00000503842 SH3GLB2Q9NR46 395 aa15.37■□□□□ 0.05
PRDM2-213ENST00000503842 GJB4Q9NTQ9 266 aa15.37■□□□□ 0.05
PRDM2-213ENST00000503842 BARHL2Q9NY43 387 aa15.37■□□□□ 0.05
PRDM2-213ENST00000503842 VPS54Q9P1Q0 977 aa15.37■□□□□ 0.05
PRDM2-213ENST00000503842 ADAMTS5Q9UNA0 930 aa15.37■□□□□ 0.05
PRDM2-213ENST00000503842 TESPA1A2RU30 521 aaPredicted RBP15.36■□□□□ 0.05
PRDM2-213ENST00000503842 FDX1P10109 184 aa15.36■□□□□ 0.05
PRDM2-213ENST00000503842 SNAP25P60880 206 aa15.36■□□□□ 0.05
PRDM2-213ENST00000503842 COG2Q14746 738 aa15.36■□□□□ 0.05
PRDM2-213ENST00000503842 TYW1BQ6NUM6 668 aa15.36■□□□□ 0.05
PRDM2-213ENST00000503842 HEATR3Q7Z4Q2 680 aa15.36■□□□□ 0.05
PRDM2-213ENST00000503842 BRI3BPQ8WY22 251 aa15.36■□□□□ 0.05
PRDM2-213ENST00000503842 ATG4CQ96DT6 458 aa15.36■□□□□ 0.05
PRDM2-213ENST00000503842 SLC38A10Q9HBR0 1119 aa15.36■□□□□ 0.05
PRDM2-213ENST00000503842 ABT1Q9ULW3 272 aaKnown RBP15.36■□□□□ 0.05
PRDM2-213ENST00000503842 WDR33Q9C0J8 1336 aaKnown RBP15.36■□□□□ 0.05
PRDM2-213ENST00000503842 CCL15-CCL14A0A0B4J2E2 113 aa15.35■□□□□ 0.05
PRDM2-213ENST00000503842 VPS37CA5D8V6 355 aaPredicted RBP15.35■□□□□ 0.05
PRDM2-213ENST00000503842 SPDYE16A6NNV3 312 aaPredicted RBP15.35■□□□□ 0.05
PRDM2-213ENST00000503842 FAM155AB1AL88 458 aaPredicted RBP15.35■□□□□ 0.05
PRDM2-213ENST00000503842 H3BQV1 296 aa15.35■□□□□ 0.05
PRDM2-213ENST00000503842 XBP1P17861 261 aa15.35■□□□□ 0.05
PRDM2-213ENST00000503842 APLP1P51693 650 aa15.35■□□□□ 0.05
PRDM2-213ENST00000503842 GUCY1B3Q02153 619 aa15.35■□□□□ 0.05
PRDM2-213ENST00000503842 NPY5RQ15761 445 aa15.35■□□□□ 0.05
PRDM2-213ENST00000503842 CCL15Q16663 113 aa15.35■□□□□ 0.05
PRDM2-213ENST00000503842 IFFO2Q5TF58 517 aa15.35■□□□□ 0.05
PRDM2-213ENST00000503842 REPS2Q8NFH8 660 aa15.35■□□□□ 0.05
PRDM2-213ENST00000503842 PHF20Q9BVI0 1012 aa15.35■□□□□ 0.05
PRDM2-213ENST00000503842 SLC45A1Q9Y2W3 748 aa15.35■□□□□ 0.05
PRDM2-213ENST00000503842 ESYT2A0FGR8 921 aa15.34■□□□□ 0.05
PRDM2-213ENST00000503842 BTBD19C9JJ37 291 aa15.34■□□□□ 0.05
PRDM2-213ENST00000503842 VWA5AO00534 786 aa15.34■□□□□ 0.05
PRDM2-213ENST00000503842 MMP1P03956 469 aa15.34■□□□□ 0.05
PRDM2-213ENST00000503842 ZSCAN22P10073 491 aaPredicted RBP15.34■□□□□ 0.05
PRDM2-213ENST00000503842 PABPC4Q13310 644 aaKnown RBP eCLIP15.34■□□□□ 0.05
PRDM2-213ENST00000503842 TRIM29Q14134 588 aa15.34■□□□□ 0.05
PRDM2-213ENST00000503842 PPP1R18Q6NYC8 613 aa15.34■□□□□ 0.05
PRDM2-213ENST00000503842 ANKRD23Q86SG2 305 aa15.34■□□□□ 0.05
PRDM2-213ENST00000503842 FBXO11Q86XK2 927 aa15.34■□□□□ 0.05
PRDM2-213ENST00000503842 CCDC148Q8NFR7 591 aa15.34■□□□□ 0.05
PRDM2-213ENST00000503842 CCDC102AQ96A19 550 aa15.34■□□□□ 0.05
PRDM2-213ENST00000503842 COA7Q96BR5 231 aa15.34■□□□□ 0.05
PRDM2-213ENST00000503842 AMNQ9BXJ7 453 aa15.34■□□□□ 0.05
PRDM2-213ENST00000503842 ASCC2Q9H1I8 757 aaPredicted RBP15.34■□□□□ 0.05
PRDM2-213ENST00000503842 HOXC10Q9NYD6 342 aa15.34■□□□□ 0.05
PRDM2-213ENST00000503842 KCNJ14Q9UNX9 436 aa15.34■□□□□ 0.05
PRDM2-213ENST00000503842 ZNF536O15090 1300 aa15.34■□□□□ 0.05
PRDM2-213ENST00000503842 SMCHD1A6NHR9 2005 aa15.33■□□□□ 0.04
PRDM2-213ENST00000503842 MANSC4A6NHS7 340 aaPredicted RBP15.33■□□□□ 0.04
PRDM2-213ENST00000503842 SNPHO15079 494 aa15.33■□□□□ 0.04
PRDM2-213ENST00000503842 ZBED4O75132 1171 aa15.33■□□□□ 0.04
PRDM2-213ENST00000503842 NAPAP54920 295 aa15.33■□□□□ 0.04
PRDM2-213ENST00000503842 IRX3P78415 501 aaPredicted RBP15.33■□□□□ 0.04
PRDM2-213ENST00000503842 CCDC174Q6PII3 467 aa15.33■□□□□ 0.04
PRDM2-213ENST00000503842 LBX2Q6XYB7 198 aa15.33■□□□□ 0.04
PRDM2-213ENST00000503842 CCDC12Q8WUD4 166 aaPredicted RBP15.33■□□□□ 0.04
PRDM2-213ENST00000503842 P2RX7Q99572 595 aaKnown RBP15.33■□□□□ 0.04
PRDM2-213ENST00000503842 PCDHA1Q9Y5I3 950 aa15.33■□□□□ 0.04
PRDM2-213ENST00000503842 A0A0G2JMZ2 1700 aa15.33■□□□□ 0.04
PRDM2-213ENST00000503842 RASSF10A6NK89 507 aa15.32■□□□□ 0.04
PRDM2-213ENST00000503842 F13A1P00488 732 aa15.32■□□□□ 0.04
PRDM2-213ENST00000503842 ICAM1P05362 532 aa15.32■□□□□ 0.04
PRDM2-213ENST00000503842 OSBPP22059 807 aa15.32■□□□□ 0.04
PRDM2-213ENST00000503842 OAZ1P54368 228 aa15.32■□□□□ 0.04
PRDM2-213ENST00000503842 KIF23Q02241 960 aaPredicted RBP15.32■□□□□ 0.04
PRDM2-213ENST00000503842 TRAF1Q13077 416 aa15.32■□□□□ 0.04
PRDM2-213ENST00000503842 RESTQ13127 1097 aa15.32■□□□□ 0.04
PRDM2-213ENST00000503842 GALNT17Q6IS24 598 aa15.32■□□□□ 0.04
PRDM2-213ENST00000503842 POTEEQ6S8J3 1075 aa15.32■□□□□ 0.04
PRDM2-213ENST00000503842 DAGLBQ8NCG7 672 aa15.32■□□□□ 0.04
PRDM2-213ENST00000503842 PTPN18Q99952 460 aa15.32■□□□□ 0.04
PRDM2-213ENST00000503842 ZMYND12Q9H0C1 365 aa15.32■□□□□ 0.04
PRDM2-213ENST00000503842 PNMA2Q9UL42 364 aa15.32■□□□□ 0.04
PRDM2-213ENST00000503842 COL11A1P12107 1806 aaPredicted RBP15.31■□□□□ 0.04
PRDM2-213ENST00000503842 ATP2A1O14983 1001 aa15.31■□□□□ 0.04
PRDM2-213ENST00000503842 TAL1P17542 331 aaPredicted RBP15.31■□□□□ 0.04
PRDM2-213ENST00000503842 CALML3P27482 149 aa15.31■□□□□ 0.04
PRDM2-213ENST00000503842 NLRP5P59047 1200 aa15.31■□□□□ 0.04
PRDM2-213ENST00000503842 HERVK_113P62684 666 aa15.31■□□□□ 0.04
PRDM2-213ENST00000503842 SAFBQ15424 915 aaKnown RBP eCLIP15.31■□□□□ 0.04
PRDM2-213ENST00000503842 E2F4Q16254 413 aa15.31■□□□□ 0.04
PRDM2-213ENST00000503842 FOXD4L5Q5VV16 416 aaPredicted RBP15.31■□□□□ 0.04
PRDM2-213ENST00000503842 DIS3L2Q8IYB7 885 aaKnown RBP15.31■□□□□ 0.04
PRDM2-213ENST00000503842 FAM43AQ8N2R8 423 aa15.31■□□□□ 0.04
PRDM2-213ENST00000503842 MB21D1Q8N884 522 aa15.31■□□□□ 0.04
PRDM2-213ENST00000503842 FOXD4L4Q8WXT5 416 aaPredicted RBP15.31■□□□□ 0.04
PRDM2-213ENST00000503842 AGBL1Q96MI9 1066 aa15.31■□□□□ 0.04
PRDM2-213ENST00000503842 PNMA3Q9UL41 463 aa15.31■□□□□ 0.04
PRDM2-213ENST00000503842 ZNF214Q9UL59 606 aaPredicted RBP15.31■□□□□ 0.04
PRDM2-213ENST00000503842 PCDHA4Q9UN74 947 aa15.31■□□□□ 0.04
PRDM2-213ENST00000503842 ABCB11O95342 1321 aa15.31■□□□□ 0.04
PRDM2-213ENST00000503842 SMCO2A6NFE2 343 aa15.3■□□□□ 0.04
PRDM2-213ENST00000503842 KIF28PB7ZC32 967 aa15.3■□□□□ 0.04
PRDM2-213ENST00000503842 M0R2N6 131 aa15.3■□□□□ 0.04
PRDM2-213ENST00000503842 PDHXO00330 501 aa15.3■□□□□ 0.04
PRDM2-213ENST00000503842 ADAMTS3O15072 1205 aa15.3■□□□□ 0.04
PRDM2-213ENST00000503842 U2AF2P26368 475 aaKnown RBP eCLIP15.3■□□□□ 0.044e-7■■■■□ 20.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms