RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 AATFQ9NY61 560 aaKnown RBP eCLIP18.94■□□□□ 0.62
HMGXB3-201ENST00000502717 ASIC3Q9UHC3 531 aa18.94■□□□□ 0.62
HMGXB3-201ENST00000502717 TARSL2A2RTX5 802 aaKnown RBP18.94■□□□□ 0.62
HMGXB3-201ENST00000502717 AP5Z1O43299 807 aa18.94■□□□□ 0.62
HMGXB3-201ENST00000502717 SCG2P13521 617 aa18.94■□□□□ 0.62
HMGXB3-201ENST00000502717 EEF2P13639 858 aaKnown RBP18.94■□□□□ 0.62
HMGXB3-201ENST00000502717 WDR66Q8TBY9 1149 aa18.94■□□□□ 0.62
HMGXB3-201ENST00000502717 FRMD3A2A2Y4 597 aa18.94■□□□□ 0.62
HMGXB3-201ENST00000502717 PLCB3Q01970 1234 aa18.94■□□□□ 0.62
HMGXB3-201ENST00000502717 ZNF365Q70YC5 407 aa18.94■□□□□ 0.62
HMGXB3-201ENST00000502717 MYOCDQ8IZQ8 938 aa18.94■□□□□ 0.62
HMGXB3-201ENST00000502717 TCP11Q8WWU5 503 aa18.94■□□□□ 0.62
HMGXB3-201ENST00000502717 CCDC87Q9NVE4 849 aa18.94■□□□□ 0.62
HMGXB3-201ENST00000502717 CTTNBP2NLQ9P2B4 639 aa18.94■□□□□ 0.62
HMGXB3-201ENST00000502717 SUN1O94901 812 aa18.94■□□□□ 0.62
HMGXB3-201ENST00000502717 RXRBP28702 533 aa18.94■□□□□ 0.62
HMGXB3-201ENST00000502717 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.94■□□□□ 0.626e-7■■■■■ 42.5
HMGXB3-201ENST00000502717 HNRNPLLQ8WVV9 542 aaKnown RBP18.94■□□□□ 0.62
HMGXB3-201ENST00000502717 DPF2Q92785 391 aa18.94■□□□□ 0.62
HMGXB3-201ENST00000502717 DPH5Q9H2P9 285 aa18.94■□□□□ 0.62
HMGXB3-201ENST00000502717 INTS9Q9NV88 658 aaKnown RBP18.94■□□□□ 0.62
HMGXB3-201ENST00000502717 LIFRP42702 1097 aa18.93■□□□□ 0.62
HMGXB3-201ENST00000502717 ZNF131P52739 623 aa18.93■□□□□ 0.62
HMGXB3-201ENST00000502717 PPP2R5AQ15172 486 aa18.93■□□□□ 0.62
HMGXB3-201ENST00000502717 MB21D1Q8N884 522 aa18.93■□□□□ 0.62
HMGXB3-201ENST00000502717 P2RX5Q93086 422 aa18.93■□□□□ 0.62
HMGXB3-201ENST00000502717 PCDHB6Q9Y5E3 794 aa18.93■□□□□ 0.62
HMGXB3-201ENST00000502717 NR5A1Q13285 461 aa18.93■□□□□ 0.62
HMGXB3-201ENST00000502717 CALCRLQ16602 461 aa18.93■□□□□ 0.62
HMGXB3-201ENST00000502717 HAUS3Q68CZ6 603 aa18.93■□□□□ 0.62
HMGXB3-201ENST00000502717 CNBD1Q8NA66 436 aa18.93■□□□□ 0.62
HMGXB3-201ENST00000502717 EIF6P56537 245 aaKnown RBP18.92■□□□□ 0.62
HMGXB3-201ENST00000502717 NBPF9Q3BBW0 867 aa18.92■□□□□ 0.62
HMGXB3-201ENST00000502717 MGARPQ8TDB4 240 aa18.92■□□□□ 0.62
HMGXB3-201ENST00000502717 MOCS3O95396 460 aa18.92■□□□□ 0.62
HMGXB3-201ENST00000502717 CXCR5P32302 372 aa18.92■□□□□ 0.62
HMGXB3-201ENST00000502717 GALNT17Q6IS24 598 aa18.92■□□□□ 0.62
HMGXB3-201ENST00000502717 ANKRD42Q8N9B4 389 aa18.92■□□□□ 0.62
HMGXB3-201ENST00000502717 GPHNQ9NQX3 736 aaPredicted RBP18.92■□□□□ 0.62
HMGXB3-201ENST00000502717 CAMSAP1Q5T5Y3 1602 aa18.92■□□□□ 0.62
HMGXB3-201ENST00000502717 LRRD1A4D1F6 860 aa18.92■□□□□ 0.62
HMGXB3-201ENST00000502717 DDAH1O94760 285 aa18.92■□□□□ 0.62
HMGXB3-201ENST00000502717 TBC1D8O95759 1140 aa18.92■□□□□ 0.62
HMGXB3-201ENST00000502717 H2AFZP0C0S5 128 aa18.92■□□□□ 0.62
HMGXB3-201ENST00000502717 POLR2FP61218 127 aaKnown RBP18.92■□□□□ 0.62
HMGXB3-201ENST00000502717 SLC7A5Q01650 507 aa18.92■□□□□ 0.62
HMGXB3-201ENST00000502717 MUM1Q2TAK8 710 aa18.92■□□□□ 0.62
HMGXB3-201ENST00000502717 HHATQ5VTY9 493 aa18.92■□□□□ 0.62
HMGXB3-201ENST00000502717 HIBCHQ6NVY1 386 aaPredicted RBP18.92■□□□□ 0.62
HMGXB3-201ENST00000502717 H2AFVQ71UI9 128 aa18.92■□□□□ 0.62
HMGXB3-201ENST00000502717 PCDHA13Q9Y5I0 950 aa18.92■□□□□ 0.62
HMGXB3-201ENST00000502717 PDE6BP35913 854 aa18.91■□□□□ 0.62
HMGXB3-201ENST00000502717 TCIRG1Q13488 830 aa18.91■□□□□ 0.62
HMGXB3-201ENST00000502717 CTNND1O60716 968 aaKnown RBP18.91■□□□□ 0.62
HMGXB3-201ENST00000502717 PLCG2P16885 1265 aa18.91■□□□□ 0.62
HMGXB3-201ENST00000502717 CYP27A1Q02318 531 aa18.91■□□□□ 0.62
HMGXB3-201ENST00000502717 TRIM68Q6AZZ1 485 aa18.91■□□□□ 0.62
HMGXB3-201ENST00000502717 NELFCDQ8IXH7 590 aa18.91■□□□□ 0.62
HMGXB3-201ENST00000502717 GJB4Q9NTQ9 266 aa18.91■□□□□ 0.62
HMGXB3-201ENST00000502717 ZKSCAN8Q15776 578 aaPredicted RBP18.91■□□□□ 0.62
HMGXB3-201ENST00000502717 RBM26Q5T8P6 1007 aaKnown RBP18.91■□□□□ 0.62
HMGXB3-201ENST00000502717 CCDC62Q6P9F0 684 aa18.91■□□□□ 0.62
HMGXB3-201ENST00000502717 VPS52Q8N1B4 723 aa18.91■□□□□ 0.62
HMGXB3-201ENST00000502717 BIN2Q9UBW5 565 aaPredicted RBP18.91■□□□□ 0.62
HMGXB3-201ENST00000502717 WDR19Q8NEZ3 1342 aa18.91■□□□□ 0.62
HMGXB3-201ENST00000502717 SPDYE3A6NKU9 549 aa18.91■□□□□ 0.62
HMGXB3-201ENST00000502717 GJC1P36383 396 aa18.91■□□□□ 0.62
HMGXB3-201ENST00000502717 SLMAPQ14BN4 828 aa18.91■□□□□ 0.62
HMGXB3-201ENST00000502717 CCHCR1Q8TD31 782 aa18.91■□□□□ 0.62
HMGXB3-201ENST00000502717 VTI1AQ96AJ9 217 aa18.91■□□□□ 0.62
HMGXB3-201ENST00000502717 SH3BGRP55822 239 aaPredicted RBP18.9■□□□□ 0.62
HMGXB3-201ENST00000502717 SREK1Q8WXA9 508 aaKnown RBP18.9■□□□□ 0.62
HMGXB3-201ENST00000502717 ANKRD2Q9GZV1 360 aa18.9■□□□□ 0.62
HMGXB3-201ENST00000502717 BZW2Q9Y6E2 419 aaKnown RBP18.9■□□□□ 0.62
HMGXB3-201ENST00000502717 STAT1P42224 750 aa18.9■□□□□ 0.62
HMGXB3-201ENST00000502717 U2AF1L4Q8WU68 220 aaKnown RBP18.9■□□□□ 0.62
HMGXB3-201ENST00000502717 ATG3Q9NT62 314 aa18.9■□□□□ 0.62
HMGXB3-201ENST00000502717 DIP2CQ9Y2E4 1556 aa18.9■□□□□ 0.62
HMGXB3-201ENST00000502717 SRGAP2O75044 1071 aa18.9■□□□□ 0.62
HMGXB3-201ENST00000502717 OR52Z1P0C646 297 aa18.9■□□□□ 0.62
HMGXB3-201ENST00000502717 CORO7P57737 925 aa18.9■□□□□ 0.62
HMGXB3-201ENST00000502717 MAN2A1Q16706 1144 aa18.9■□□□□ 0.62
HMGXB3-201ENST00000502717 EPSTI1Q96J88 318 aa18.9■□□□□ 0.62
HMGXB3-201ENST00000502717 ERBB3P21860 1342 aa18.9■□□□□ 0.62
HMGXB3-201ENST00000502717 LOC102724159A0A0B4J2E5 919 aa18.9■□□□□ 0.62
HMGXB3-201ENST00000502717 LAD1O00515 517 aa18.9■□□□□ 0.62
HMGXB3-201ENST00000502717 PWP2Q15269 919 aaKnown RBP18.9■□□□□ 0.62
HMGXB3-201ENST00000502717 STAG1Q8WVM7 1258 aa18.9■□□□□ 0.62
HMGXB3-201ENST00000502717 GBP5Q96PP8 586 aa18.9■□□□□ 0.62
HMGXB3-201ENST00000502717 NT5C3AQ9H0P0 336 aa18.9■□□□□ 0.62
HMGXB3-201ENST00000502717 ABCC12Q96J65 1359 aa18.9■□□□□ 0.62
HMGXB3-201ENST00000502717 EIF4A3P38919 411 aaKnown RBP18.89■□□□□ 0.62
HMGXB3-201ENST00000502717 MAIP1Q8WWC4 291 aa18.89■□□□□ 0.62
HMGXB3-201ENST00000502717 RBM17Q96I25 401 aaKnown RBP18.89■□□□□ 0.62
HMGXB3-201ENST00000502717 QTRT2Q9H974 415 aaKnown RBP18.89■□□□□ 0.62
HMGXB3-201ENST00000502717 SLC39A2Q9NP94 309 aa18.89■□□□□ 0.62
HMGXB3-201ENST00000502717 NFU1Q9UMS0 254 aa18.89■□□□□ 0.62
HMGXB3-201ENST00000502717 H0YIN7 160 aa18.89■□□□□ 0.61
HMGXB3-201ENST00000502717 TEX33O43247 280 aa18.89■□□□□ 0.61
HMGXB3-201ENST00000502717 CCNE1P24864 410 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms