RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 MORF4L1Q9UBU8 362 aa18.18■□□□□ 0.5
HPS4-216ENST00000493455 FDPSP14324 419 aaKnown RBP18.17■□□□□ 0.5
HPS4-216ENST00000493455 GJB2P29033 226 aa18.17■□□□□ 0.5
HPS4-216ENST00000493455 CUL4AQ13619 759 aa18.17■□□□□ 0.5
HPS4-216ENST00000493455 PKN1Q16512 942 aa18.17■□□□□ 0.5
HPS4-216ENST00000493455 MUM1L1Q5H9M0 696 aa18.17■□□□□ 0.5
HPS4-216ENST00000493455 NSMFQ6X4W1 530 aa18.17■□□□□ 0.5
HPS4-216ENST00000493455 RIOX2Q8IUF8 465 aa18.17■□□□□ 0.5
HPS4-216ENST00000493455 ALG1Q9BT22 464 aa18.17■□□□□ 0.5
HPS4-216ENST00000493455 ABCB11O95342 1321 aa18.17■□□□□ 0.5
HPS4-216ENST00000493455 STK36Q9NRP7 1315 aa18.17■□□□□ 0.5
HPS4-216ENST00000493455 ZNFX1Q9P2E3 1918 aaKnown RBP18.16■□□□□ 0.5
HPS4-216ENST00000493455 GPR25O00155 361 aa18.16■□□□□ 0.5
HPS4-216ENST00000493455 HMGN5P82970 282 aaKnown RBP18.16■□□□□ 0.5
HPS4-216ENST00000493455 SP3Q02447 781 aa18.16■□□□□ 0.5
HPS4-216ENST00000493455 SMARCC2Q8TAQ2 1214 aa18.16■□□□□ 0.5
HPS4-216ENST00000493455 WASF1Q92558 559 aa18.16■□□□□ 0.5
HPS4-216ENST00000493455 ACAD9Q9H845 621 aa18.16■□□□□ 0.5
HPS4-216ENST00000493455 DAXXQ9UER7 740 aaPredicted RBP18.16■□□□□ 0.5
HPS4-216ENST00000493455 STXBP3O00186 592 aa18.15■□□□□ 0.5
HPS4-216ENST00000493455 NFIBO00712 420 aa18.15■□□□□ 0.5
HPS4-216ENST00000493455 ATP2A1O14983 1001 aa18.15■□□□□ 0.5
HPS4-216ENST00000493455 SLC25A27O95847 323 aa18.15■□□□□ 0.5
HPS4-216ENST00000493455 GUCY1B3Q02153 619 aa18.15■□□□□ 0.5
HPS4-216ENST00000493455 KIF22Q14807 665 aa18.15■□□□□ 0.5
HPS4-216ENST00000493455 CD99L2Q8TCZ2 262 aa18.15■□□□□ 0.5
HPS4-216ENST00000493455 ARHGAP39Q9C0H5 1083 aa18.15■□□□□ 0.5
HPS4-216ENST00000493455 GJB4Q9NTQ9 266 aa18.15■□□□□ 0.5
HPS4-216ENST00000493455 MRPL11Q9Y3B7 192 aaKnown RBP18.15■□□□□ 0.5
HPS4-216ENST00000493455 IVNS1ABPQ9Y6Y0 642 aa18.15■□□□□ 0.5
HPS4-216ENST00000493455 TNPO2O14787 897 aaKnown RBP18.14■□□□□ 0.49
HPS4-216ENST00000493455 CFBP00751 764 aa18.14■□□□□ 0.49
HPS4-216ENST00000493455 HSPA1AP0DMV8 641 aaKnown RBP18.14■□□□□ 0.49
HPS4-216ENST00000493455 HSPA1BP0DMV9 641 aaKnown RBP18.14■□□□□ 0.49
HPS4-216ENST00000493455 NLRP5P59047 1200 aa18.14■□□□□ 0.49
HPS4-216ENST00000493455 TRAF1Q13077 416 aa18.14■□□□□ 0.49
HPS4-216ENST00000493455 TRIM29Q14134 588 aa18.14■□□□□ 0.49
HPS4-216ENST00000493455 TKFCQ3LXA3 575 aa18.14■□□□□ 0.49
HPS4-216ENST00000493455 TYW1BQ6NUM6 668 aa18.14■□□□□ 0.49
HPS4-216ENST00000493455 ANKRD35Q8N283 1001 aa18.14■□□□□ 0.49
HPS4-216ENST00000493455 JMYQ8N9B5 988 aa18.14■□□□□ 0.49
HPS4-216ENST00000493455 MMP19Q99542 508 aa18.14■□□□□ 0.49
HPS4-216ENST00000493455 CFHR5Q9BXR6 569 aa18.14■□□□□ 0.49
HPS4-216ENST00000493455 BARHL2Q9NY43 387 aa18.14■□□□□ 0.49
HPS4-216ENST00000493455 PNMA2Q9UL42 364 aa18.14■□□□□ 0.49
HPS4-216ENST00000493455 KCNJ14Q9UNX9 436 aa18.14■□□□□ 0.49
HPS4-216ENST00000493455 DOCK3Q8IZD9 2030 aa18.13■□□□□ 0.49
HPS4-216ENST00000493455 hCG_1984214I3L0E3 225 aa18.13■□□□□ 0.49
HPS4-216ENST00000493455 FKTNO75072 461 aa18.13■□□□□ 0.49
HPS4-216ENST00000493455 XBP1P17861 261 aa18.13■□□□□ 0.49
HPS4-216ENST00000493455 MAPK4P31152 587 aa18.13■□□□□ 0.49
HPS4-216ENST00000493455 COPB2P35606 906 aa18.13■□□□□ 0.49
HPS4-216ENST00000493455 PSMC4P43686 418 aa18.13■□□□□ 0.49
HPS4-216ENST00000493455 LACTBP83111 547 aaPredicted RBP18.13■□□□□ 0.49
HPS4-216ENST00000493455 KCTD2Q14681 263 aa18.13■□□□□ 0.49
HPS4-216ENST00000493455 GPR142Q7Z601 462 aa18.13■□□□□ 0.49
HPS4-216ENST00000493455 PLEKHH3Q7Z736 793 aa18.13■□□□□ 0.49
HPS4-216ENST00000493455 ZNF713Q8N859 430 aaPredicted RBP18.13■□□□□ 0.49
HPS4-216ENST00000493455 SHCBP1Q8NEM2 672 aa18.13■□□□□ 0.49
HPS4-216ENST00000493455 CHST13Q8NET6 341 aa18.13■□□□□ 0.49
HPS4-216ENST00000493455 CCDC148Q8NFR7 591 aa18.13■□□□□ 0.49
HPS4-216ENST00000493455 CCDC12Q8WUD4 166 aaPredicted RBP18.13■□□□□ 0.49
HPS4-216ENST00000493455 ZNF296Q8WUU4 475 aaPredicted RBP18.13■□□□□ 0.49
HPS4-216ENST00000493455 C8orf76Q96K31 380 aa18.13■□□□□ 0.49
HPS4-216ENST00000493455 MROH8Q9H579 483 aa18.13■□□□□ 0.49
HPS4-216ENST00000493455 FBXO40Q9UH90 709 aa18.13■□□□□ 0.49
HPS4-216ENST00000493455 CASP8AP2Q9UKL3 1982 aa18.13■□□□□ 0.49
HPS4-216ENST00000493455 SMCO2A6NFE2 343 aa18.12■□□□□ 0.49
HPS4-216ENST00000493455 FOXN1O15353 648 aa18.12■□□□□ 0.49
HPS4-216ENST00000493455 CALML3P27482 149 aa18.12■□□□□ 0.49
HPS4-216ENST00000493455 HOXA13P31271 388 aaPredicted RBP18.12■□□□□ 0.49
HPS4-216ENST00000493455 ADCY7P51828 1080 aa18.12■□□□□ 0.49
HPS4-216ENST00000493455 FCGRTP55899 365 aa18.12■□□□□ 0.49
HPS4-216ENST00000493455 UBE2SQ16763 222 aa18.12■□□□□ 0.49
HPS4-216ENST00000493455 CLEC4DQ8WXI8 215 aa18.12■□□□□ 0.49
HPS4-216ENST00000493455 TBC1D5Q92609 795 aa18.12■□□□□ 0.49
HPS4-216ENST00000493455 KIF3AQ9Y496 699 aa18.12■□□□□ 0.49
HPS4-216ENST00000493455 PLXNA1Q9UIW2 1896 aa18.12■□□□□ 0.49
HPS4-216ENST00000493455 FCER1AP12319 257 aa18.11■□□□□ 0.49
HPS4-216ENST00000493455 CTGFP29279 349 aa18.11■□□□□ 0.49
HPS4-216ENST00000493455 PPP1R18Q6NYC8 613 aa18.11■□□□□ 0.49
HPS4-216ENST00000493455 SLC30A10Q6XR72 485 aa18.11■□□□□ 0.49
HPS4-216ENST00000493455 RNF207Q6ZRF8 634 aa18.11■□□□□ 0.49
HPS4-216ENST00000493455 FCHSD1Q86WN1 690 aa18.11■□□□□ 0.49
HPS4-216ENST00000493455 CUL5Q93034 780 aa18.11■□□□□ 0.49
HPS4-216ENST00000493455 SHISA4Q96DD7 197 aa18.11■□□□□ 0.49
HPS4-216ENST00000493455 INTS4Q96HW7 963 aaKnown RBP18.11■□□□□ 0.49
HPS4-216ENST00000493455 PSTPIP2Q9H939 334 aa18.11■□□□□ 0.49
HPS4-216ENST00000493455 C6orf50Q9HD87 102 aa18.11■□□□□ 0.49
HPS4-216ENST00000493455 A1CFQ9NQ94 594 aaKnown RBP18.11■□□□□ 0.49
HPS4-216ENST00000493455 H3BQV1 296 aa18.1■□□□□ 0.49
HPS4-216ENST00000493455 GCOM1H8Y6P7 765 aaPredicted RBP18.1■□□□□ 0.49
HPS4-216ENST00000493455 PGK2P07205 417 aa18.1■□□□□ 0.49
HPS4-216ENST00000493455 POLR2MP0CAP2 368 aa18.1■□□□□ 0.49
HPS4-216ENST00000493455 BAATQ14032 418 aaPredicted RBP18.1■□□□□ 0.49
HPS4-216ENST00000493455 IFFO2Q5TF58 517 aa18.1■□□□□ 0.49
HPS4-216ENST00000493455 KRT40Q6A162 431 aa18.1■□□□□ 0.49
HPS4-216ENST00000493455 USP17L6PQ6QN14 398 aa18.1■□□□□ 0.49
HPS4-216ENST00000493455 MCF2L2Q86YR7 1114 aa18.1■□□□□ 0.49
HPS4-216ENST00000493455 ERO1AQ96HE7 468 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms