RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 FAM83BQ5T0W9 1011 aa10.37□□□□□ -0.75
SMARCC1-208ENST00000492896 DCAF15Q66K64 600 aa10.37□□□□□ -0.75
SMARCC1-208ENST00000492896 MCTP2Q6DN12 878 aa10.37□□□□□ -0.75
SMARCC1-208ENST00000492896 FAM160B2Q86V87 743 aa10.37□□□□□ -0.75
SMARCC1-208ENST00000492896 FBXO11Q86XK2 927 aa10.37□□□□□ -0.75
SMARCC1-208ENST00000492896 SPICE1Q8N0Z3 855 aa10.37□□□□□ -0.75
SMARCC1-208ENST00000492896 AOPEPQ8N6M6 819 aa10.37□□□□□ -0.75
SMARCC1-208ENST00000492896 SMARCE1Q969G3 411 aa10.37□□□□□ -0.75
SMARCC1-208ENST00000492896 HOOK2Q96ED9 719 aa10.37□□□□□ -0.75
SMARCC1-208ENST00000492896 WDR90Q96KV7 1748 aa10.37□□□□□ -0.75
SMARCC1-208ENST00000492896 FEZ1Q99689 392 aa10.37□□□□□ -0.75
SMARCC1-208ENST00000492896 NAP1L4Q99733 375 aaKnown RBP10.37□□□□□ -0.75
SMARCC1-208ENST00000492896 FHDC1Q9C0D6 1143 aaPredicted RBP10.37□□□□□ -0.75
SMARCC1-208ENST00000492896 PSTPIP2Q9H939 334 aa10.37□□□□□ -0.75
SMARCC1-208ENST00000492896 CCDC39Q9UFE4 941 aa10.37□□□□□ -0.75
SMARCC1-208ENST00000492896 PRR12Q9ULL5 1215 aa10.37□□□□□ -0.75
SMARCC1-208ENST00000492896 PCDHA1Q9Y5I3 950 aa10.37□□□□□ -0.75
SMARCC1-208ENST00000492896 ASTN2O75129 1339 aaPredicted RBP10.36□□□□□ -0.75
SMARCC1-208ENST00000492896 PHF20L1A8MW92 1017 aa10.36□□□□□ -0.75
SMARCC1-208ENST00000492896 FOXN1O15353 648 aa10.36□□□□□ -0.75
SMARCC1-208ENST00000492896 SMC2O95347 1197 aa10.36□□□□□ -0.75
SMARCC1-208ENST00000492896 PTMAP06454 111 aaKnown RBP10.36□□□□□ -0.75
SMARCC1-208ENST00000492896 TPM4P67936 248 aa10.36□□□□□ -0.75
SMARCC1-208ENST00000492896 MDM2Q00987 491 aaPredicted RBP10.36□□□□□ -0.75
SMARCC1-208ENST00000492896 AP3B2Q13367 1082 aa10.36□□□□□ -0.75
SMARCC1-208ENST00000492896 DHX40Q8IX18 779 aaKnown RBP10.36□□□□□ -0.75
SMARCC1-208ENST00000492896 GPC2Q8N158 579 aa10.36□□□□□ -0.75
SMARCC1-208ENST00000492896 TRIML1Q8N9V2 468 aa10.36□□□□□ -0.75
SMARCC1-208ENST00000492896 IQUBQ8NA54 791 aa10.36□□□□□ -0.75
SMARCC1-208ENST00000492896 CHURC1Q8WUH1 139 aa10.36□□□□□ -0.75
SMARCC1-208ENST00000492896 AK8Q96MA6 479 aa10.36□□□□□ -0.75
SMARCC1-208ENST00000492896 ZNF341Q9BYN7 854 aa10.36□□□□□ -0.75
SMARCC1-208ENST00000492896 CCSER1Q9C0I3 900 aa10.36□□□□□ -0.75
SMARCC1-208ENST00000492896 GPRC5DQ9NZD1 345 aa10.36□□□□□ -0.75
SMARCC1-208ENST00000492896 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.36□□□□□ -0.75
SMARCC1-208ENST00000492896 DACH1Q9UI36 760 aa10.36□□□□□ -0.75
SMARCC1-208ENST00000492896 MAN1B1Q9UKM7 699 aa10.36□□□□□ -0.75
SMARCC1-208ENST00000492896 SCAF8Q9UPN6 1271 aaKnown RBP10.36□□□□□ -0.75
SMARCC1-208ENST00000492896 PCDHA5Q9Y5H7 936 aa10.36□□□□□ -0.75
SMARCC1-208ENST00000492896 OTOFQ9HC10 1997 aa10.35□□□□□ -0.75
SMARCC1-208ENST00000492896 PAPPA2Q9BXP8 1791 aa10.35□□□□□ -0.75
SMARCC1-208ENST00000492896 SMTNL1A8MU46 457 aa10.35□□□□□ -0.75
SMARCC1-208ENST00000492896 AP5Z1O43299 807 aa10.35□□□□□ -0.75
SMARCC1-208ENST00000492896 PLA2G6O60733 806 aa10.35□□□□□ -0.75
SMARCC1-208ENST00000492896 GCFC2P16383 781 aaKnown RBP10.35□□□□□ -0.75
SMARCC1-208ENST00000492896 STAT6P42226 847 aa10.35□□□□□ -0.75
SMARCC1-208ENST00000492896 SNAP25P60880 206 aa10.35□□□□□ -0.75
SMARCC1-208ENST00000492896 ZYXQ15942 572 aaKnown RBP10.35□□□□□ -0.75
SMARCC1-208ENST00000492896 E2F4Q16254 413 aa10.35□□□□□ -0.75
SMARCC1-208ENST00000492896 CALCRLQ16602 461 aa10.35□□□□□ -0.75
SMARCC1-208ENST00000492896 TMEM266Q2M3C6 531 aa10.35□□□□□ -0.75
SMARCC1-208ENST00000492896 USH1GQ495M9 461 aa10.35□□□□□ -0.75
SMARCC1-208ENST00000492896 KIAA1755Q5JYT7 1200 aa10.35□□□□□ -0.75
SMARCC1-208ENST00000492896 NT5DC1Q5TFE4 455 aa10.35□□□□□ -0.75
SMARCC1-208ENST00000492896 ANGEL2Q5VTE6 544 aaKnown RBP10.35□□□□□ -0.75
SMARCC1-208ENST00000492896 SARM1Q6SZW1 724 aa10.35□□□□□ -0.75
SMARCC1-208ENST00000492896 SH3RF1Q7Z6J0 888 aa10.35□□□□□ -0.75
SMARCC1-208ENST00000492896 POTEDQ86YR6 584 aa10.35□□□□□ -0.75
SMARCC1-208ENST00000492896 TEX2Q8IWB9 1127 aa10.35□□□□□ -0.75
SMARCC1-208ENST00000492896 GRAMD1CQ8IYS0 662 aa10.35□□□□□ -0.75
SMARCC1-208ENST00000492896 RASSF8Q8NHQ8 419 aa10.35□□□□□ -0.75
SMARCC1-208ENST00000492896 TRPM4Q8TD43 1214 aa10.35□□□□□ -0.75
SMARCC1-208ENST00000492896 PAGE5Q96GU1 130 aa10.35□□□□□ -0.75
SMARCC1-208ENST00000492896 ANO3Q9BYT9 981 aa10.35□□□□□ -0.75
SMARCC1-208ENST00000492896 DEFB129Q9H1M3 183 aa10.35□□□□□ -0.75
SMARCC1-208ENST00000492896 RANBP17Q9H2T7 1088 aaKnown RBP10.35□□□□□ -0.75
SMARCC1-208ENST00000492896 DISC1Q9NRI5 854 aa10.35□□□□□ -0.75
SMARCC1-208ENST00000492896 FEM1BQ9UK73 627 aa10.35□□□□□ -0.75
SMARCC1-208ENST00000492896 PPP2R3BQ9Y5P8 575 aa10.35□□□□□ -0.75
SMARCC1-208ENST00000492896 COL11A1P12107 1806 aaPredicted RBP10.35□□□□□ -0.75
SMARCC1-208ENST00000492896 WDR46O15213 610 aaKnown RBP10.34□□□□□ -0.75
SMARCC1-208ENST00000492896 GTPBP6O43824 516 aaPredicted RBP10.34□□□□□ -0.75
SMARCC1-208ENST00000492896 SLC37A4O43826 429 aa10.34□□□□□ -0.75
SMARCC1-208ENST00000492896 CTNND1O60716 968 aaKnown RBP10.34□□□□□ -0.75
SMARCC1-208ENST00000492896 TDP2O95551 362 aa10.34□□□□□ -0.75
SMARCC1-208ENST00000492896 UBA7P41226 1012 aa10.34□□□□□ -0.75
SMARCC1-208ENST00000492896 AFMP43652 599 aa10.34□□□□□ -0.75
SMARCC1-208ENST00000492896 SARSP49591 514 aaKnown RBP10.34□□□□□ -0.75
SMARCC1-208ENST00000492896 ZNF75DP51815 510 aa10.34□□□□□ -0.75
SMARCC1-208ENST00000492896 KARSQ15046 597 aaKnown RBP10.34□□□□□ -0.75
SMARCC1-208ENST00000492896 NBPF12Q5TAG4 269 aaPredicted RBP10.34□□□□□ -0.75
SMARCC1-208ENST00000492896 ISM2Q6H9L7 571 aa10.34□□□□□ -0.75
SMARCC1-208ENST00000492896 PPP4R3AQ6IN85 833 aa10.34□□□□□ -0.75
SMARCC1-208ENST00000492896 PDXDC2PQ6P474 469 aa10.34□□□□□ -0.75
SMARCC1-208ENST00000492896 CCDC84Q86UT8 332 aaPredicted RBP10.34□□□□□ -0.75
SMARCC1-208ENST00000492896 CABP7Q86V35 215 aa10.34□□□□□ -0.75
SMARCC1-208ENST00000492896 LPAR1Q92633 364 aa10.34□□□□□ -0.75
SMARCC1-208ENST00000492896 KIFC2Q96AC6 838 aa10.34□□□□□ -0.75
SMARCC1-208ENST00000492896 GLIS2Q9BZE0 524 aaPredicted RBP10.34□□□□□ -0.75
SMARCC1-208ENST00000492896 MAGEF1Q9HAY2 307 aa10.34□□□□□ -0.75
SMARCC1-208ENST00000492896 GGA3Q9NZ52 723 aa10.34□□□□□ -0.75
SMARCC1-208ENST00000492896 DDX25Q9UHL0 483 aaKnown RBP10.34□□□□□ -0.75
SMARCC1-208ENST00000492896 PTPRFP10586 1907 aa10.34□□□□□ -0.75
SMARCC1-208ENST00000492896 SPDYE3A6NKU9 549 aa10.33□□□□□ -0.76
SMARCC1-208ENST00000492896 PP2D1A8MPX8 630 aa10.33□□□□□ -0.76
SMARCC1-208ENST00000492896 GOLGA6L6A8MZA4 724 aa10.33□□□□□ -0.76
SMARCC1-208ENST00000492896 USP17L15C9J2P7 530 aa10.33□□□□□ -0.76
SMARCC1-208ENST00000492896 USP17L13C9JLJ4 530 aa10.33□□□□□ -0.76
SMARCC1-208ENST00000492896 USP17L11C9JVI0 530 aa10.33□□□□□ -0.76
SMARCC1-208ENST00000492896 USP17L18D6R9N7 530 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms