RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 MTMR10Q9NXD2 777 aa8.76□□□□□ -1.01
PRPF4B-208ENST00000490653 TTC41PQ6P2S7 1318 aa8.76□□□□□ -1.01
PRPF4B-208ENST00000490653 HOXA2O43364 376 aa8.75□□□□□ -1.01
PRPF4B-208ENST00000490653 COBLO75128 1261 aa8.75□□□□□ -1.01
PRPF4B-208ENST00000490653 GLRX3O76003 335 aaKnown RBP8.75□□□□□ -1.01
PRPF4B-208ENST00000490653 APPP05067 770 aa8.75□□□□□ -1.01
PRPF4B-208ENST00000490653 MAPK4P31152 587 aa8.75□□□□□ -1.01
PRPF4B-208ENST00000490653 MAGEA10P43363 369 aaPredicted RBP8.75□□□□□ -1.01
PRPF4B-208ENST00000490653 PDE1AP54750 535 aa8.75□□□□□ -1.01
PRPF4B-208ENST00000490653 ICA1Q05084 483 aa8.75□□□□□ -1.01
PRPF4B-208ENST00000490653 HDAC1Q13547 482 aaPredicted RBP8.75□□□□□ -1.01
PRPF4B-208ENST00000490653 FAM47AQ5JRC9 791 aa8.75□□□□□ -1.01
PRPF4B-208ENST00000490653 VPS53Q5VIR6 699 aa8.75□□□□□ -1.01
PRPF4B-208ENST00000490653 C7orf61Q8IZ16 206 aa8.75□□□□□ -1.01
PRPF4B-208ENST00000490653 GPATCH3Q96I76 525 aa8.75□□□□□ -1.01
PRPF4B-208ENST00000490653 CCDC17Q96LX7 622 aa8.75□□□□□ -1.01
PRPF4B-208ENST00000490653 FSD1Q9BTV5 496 aa8.75□□□□□ -1.01
PRPF4B-208ENST00000490653 TANGO6Q9C0B7 1094 aa8.75□□□□□ -1.01
PRPF4B-208ENST00000490653 LNPKQ9C0E8 428 aa8.75□□□□□ -1.01
PRPF4B-208ENST00000490653 VCPKMTQ9H867 229 aa8.75□□□□□ -1.01
PRPF4B-208ENST00000490653 SUPT16HQ9Y5B9 1047 aaKnown RBP8.75□□□□□ -1.01
PRPF4B-208ENST00000490653 NR2E3Q9Y5X4 410 aa8.75□□□□□ -1.01
PRPF4B-208ENST00000490653 MYH8P13535 1937 aa8.74□□□□□ -1.01
PRPF4B-208ENST00000490653 IGKV6D-41A0A0C4DH26 115 aa8.74□□□□□ -1.01
PRPF4B-208ENST00000490653 RAD21O60216 631 aa8.74□□□□□ -1.01
PRPF4B-208ENST00000490653 HMGCRP04035 888 aa8.74□□□□□ -1.01
PRPF4B-208ENST00000490653 COL6A1P12109 1028 aa8.74□□□□□ -1.01
PRPF4B-208ENST00000490653 ERCC3P19447 782 aa8.74□□□□□ -1.01
PRPF4B-208ENST00000490653 IRX6P78412 446 aaPredicted RBP8.74□□□□□ -1.01
PRPF4B-208ENST00000490653 PLCB2Q00722 1185 aa8.74□□□□□ -1.01
PRPF4B-208ENST00000490653 CTDSPL2Q05D32 466 aa8.74□□□□□ -1.01
PRPF4B-208ENST00000490653 PLS1Q14651 629 aa8.74□□□□□ -1.01
PRPF4B-208ENST00000490653 TMEM132BQ14DG7 1078 aa8.74□□□□□ -1.01
PRPF4B-208ENST00000490653 PRAMEF19Q5SWL8 479 aa8.74□□□□□ -1.01
PRPF4B-208ENST00000490653 FAM83BQ5T0W9 1011 aa8.74□□□□□ -1.01
PRPF4B-208ENST00000490653 MAP3K21Q5TCX8 1036 aa8.74□□□□□ -1.01
PRPF4B-208ENST00000490653 CCAR1Q8IX12 1150 aaKnown RBP8.74□□□□□ -1.01
PRPF4B-208ENST00000490653 TRPV1Q8NER1 839 aa8.74□□□□□ -1.01
PRPF4B-208ENST00000490653 FAM227BQ96M60 508 aa8.74□□□□□ -1.01
PRPF4B-208ENST00000490653 COL25A1Q9BXS0 654 aaPredicted RBP8.74□□□□□ -1.01
PRPF4B-208ENST00000490653 MKNK2Q9HBH9 465 aa8.74□□□□□ -1.01
PRPF4B-208ENST00000490653 ARHGEF10LQ9HCE6 1279 aa8.74□□□□□ -1.01
PRPF4B-208ENST00000490653 HMX1Q9NP08 348 aaPredicted RBP8.74□□□□□ -1.01
PRPF4B-208ENST00000490653 HOXC10Q9NYD6 342 aa8.74□□□□□ -1.01
PRPF4B-208ENST00000490653 CLIP2Q9UDT6 1046 aa8.74□□□□□ -1.01
PRPF4B-208ENST00000490653 MUC3AQ02505 3323 aa8.74□□□□□ -1.01
PRPF4B-208ENST00000490653 RPTORQ8N122 1335 aa8.74□□□□□ -1.01
PRPF4B-208ENST00000490653 SLC15A5A6NIM6 579 aa8.73□□□□□ -1.01
PRPF4B-208ENST00000490653 F5H6K3 240 aa8.73□□□□□ -1.01
PRPF4B-208ENST00000490653 ERC2O15083 957 aa8.73□□□□□ -1.01
PRPF4B-208ENST00000490653 FLOT1O75955 427 aa8.73□□□□□ -1.01
PRPF4B-208ENST00000490653 IGHA2P01877 340 aa8.73□□□□□ -1.01
PRPF4B-208ENST00000490653 ZFYP08048 801 aaPredicted RBP8.73□□□□□ -1.01
PRPF4B-208ENST00000490653 XRCC5P13010 732 aaKnown RBP8.73□□□□□ -1.01
PRPF4B-208ENST00000490653 CYP2C19P33261 490 aa8.73□□□□□ -1.01
PRPF4B-208ENST00000490653 RGS2P41220 211 aa8.73□□□□□ -1.01
PRPF4B-208ENST00000490653 TDO2P48775 406 aa8.73□□□□□ -1.01
PRPF4B-208ENST00000490653 MDM2Q00987 491 aaPredicted RBP8.73□□□□□ -1.01
PRPF4B-208ENST00000490653 KLRC3Q07444 240 aa8.73□□□□□ -1.01
PRPF4B-208ENST00000490653 LRIT3Q3SXY7 679 aa8.73□□□□□ -1.01
PRPF4B-208ENST00000490653 ANO1Q5XXA6 986 aa8.73□□□□□ -1.01
PRPF4B-208ENST00000490653 GIMAP6Q6P9H5 292 aa8.73□□□□□ -1.01
PRPF4B-208ENST00000490653 AMOTL1Q8IY63 956 aa8.73□□□□□ -1.01
PRPF4B-208ENST00000490653 DEFB123Q8N688 67 aa8.73□□□□□ -1.01
PRPF4B-208ENST00000490653 REPS2Q8NFH8 660 aa8.73□□□□□ -1.01
PRPF4B-208ENST00000490653 GTF3C2Q8WUA4 911 aaPredicted RBP8.73□□□□□ -1.01
PRPF4B-208ENST00000490653 DDRGK1Q96HY6 314 aa8.73□□□□□ -1.01
PRPF4B-208ENST00000490653 GUCD1Q96NT3 240 aa8.73□□□□□ -1.01
PRPF4B-208ENST00000490653 SPATC1LQ9H0A9 340 aa8.73□□□□□ -1.01
PRPF4B-208ENST00000490653 KANSL2Q9H9L4 492 aa8.73□□□□□ -1.01
PRPF4B-208ENST00000490653 CWC22Q9HCG8 908 aaKnown RBP8.73□□□□□ -1.01
PRPF4B-208ENST00000490653 ARPP21Q9UBL0 812 aaPredicted RBP8.73□□□□□ -1.01
PRPF4B-208ENST00000490653 OGDHLQ9ULD0 1010 aa8.73□□□□□ -1.01
PRPF4B-208ENST00000490653 ADAMTS5Q9UNA0 930 aa8.73□□□□□ -1.01
PRPF4B-208ENST00000490653 ZNFX1Q9P2E3 1918 aaKnown RBP8.73□□□□□ -1.01
PRPF4B-208ENST00000490653 PRUNE2Q8WUY3 3088 aa8.73□□□□□ -1.01
PRPF4B-208ENST00000490653 A0A0D9SFI3 127 aa8.72□□□□□ -1.01
PRPF4B-208ENST00000490653 NMT2O60551 498 aa8.72□□□□□ -1.01
PRPF4B-208ENST00000490653 NDUFB10O96000 172 aa8.72□□□□□ -1.01
PRPF4B-208ENST00000490653 ZKSCAN1P17029 563 aaPredicted RBP8.72□□□□□ -1.01
PRPF4B-208ENST00000490653 JUNDP17535 347 aa8.72□□□□□ -1.01
PRPF4B-208ENST00000490653 TFAP4Q01664 338 aa8.72□□□□□ -1.01
PRPF4B-208ENST00000490653 NMIQ13287 307 aaPredicted RBP8.72□□□□□ -1.01
PRPF4B-208ENST00000490653 GRB14Q14449 540 aa8.72□□□□□ -1.01
PRPF4B-208ENST00000490653 LRRC26Q2I0M4 334 aa8.72□□□□□ -1.01
PRPF4B-208ENST00000490653 RASGRP2Q7LDG7 609 aa8.72□□□□□ -1.01
PRPF4B-208ENST00000490653 ZNF589Q86UQ0 364 aaPredicted RBP8.72□□□□□ -1.01
PRPF4B-208ENST00000490653 NCAPG2Q86XI2 1143 aa8.72□□□□□ -1.01
PRPF4B-208ENST00000490653 PLEKHM2Q8IWE5 1019 aa8.72□□□□□ -1.01
PRPF4B-208ENST00000490653 SMC5Q8IY18 1101 aa8.72□□□□□ -1.01
PRPF4B-208ENST00000490653 ZNF444Q8N0Y2 327 aaPredicted RBP8.72□□□□□ -1.01
PRPF4B-208ENST00000490653 LRRC47Q8N1G4 583 aaKnown RBP8.72□□□□□ -1.01
PRPF4B-208ENST00000490653 SOCS4Q8WXH5 440 aa8.72□□□□□ -1.01
PRPF4B-208ENST00000490653 CEP95Q96GE4 821 aa8.72□□□□□ -1.01
PRPF4B-208ENST00000490653 NYAP2Q9P242 653 aa8.72□□□□□ -1.01
PRPF4B-208ENST00000490653 STXBP5LQ9Y2K9 1186 aa8.72□□□□□ -1.01
PRPF4B-208ENST00000490653 RIPK3Q9Y572 518 aa8.72□□□□□ -1.01
PRPF4B-208ENST00000490653 COL11A1P12107 1806 aaPredicted RBP8.71□□□□□ -1.01
PRPF4B-208ENST00000490653 DNAH12Q6ZR08 3092 aa8.71□□□□□ -1.01
PRPF4B-208ENST00000490653 WDR46O15213 610 aaKnown RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms