RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 CALM3P0DP25 149 aa14.49□□□□□ -0.09
HMG20B-211ENST00000486028 KIF5BP33176 963 aa14.49□□□□□ -0.09
HMG20B-211ENST00000486028 MLLT1Q03111 559 aaPredicted RBP14.49□□□□□ -0.09
HMG20B-211ENST00000486028 COL9A3Q14050 684 aaPredicted RBP14.49□□□□□ -0.09
HMG20B-211ENST00000486028 CDC37Q16543 378 aaPredicted RBP14.49□□□□□ -0.09
HMG20B-211ENST00000486028 MUM1L1Q5H9M0 696 aa14.49□□□□□ -0.09
HMG20B-211ENST00000486028 SYNE3Q6ZMZ3 975 aa14.49□□□□□ -0.09
HMG20B-211ENST00000486028 ZNF654Q8IZM8 581 aa14.49□□□□□ -0.09
HMG20B-211ENST00000486028 CTCFLQ8NI51 663 aaPredicted RBP14.49□□□□□ -0.09
HMG20B-211ENST00000486028 U2AF1L4Q8WU68 220 aaKnown RBP14.49□□□□□ -0.09
HMG20B-211ENST00000486028 JAKMIP1Q96N16 626 aaKnown RBP14.49□□□□□ -0.09
HMG20B-211ENST00000486028 LRRC2Q9BYS8 371 aa14.49□□□□□ -0.09
HMG20B-211ENST00000486028 SNX14Q9Y5W7 946 aa14.49□□□□□ -0.09
HMG20B-211ENST00000486028 SLC12A7Q9Y666 1083 aa14.49□□□□□ -0.09
HMG20B-211ENST00000486028 ZNF236Q9UL36 1845 aa14.48□□□□□ -0.09
HMG20B-211ENST00000486028 PSMA5P28066 241 aa14.48□□□□□ -0.09
HMG20B-211ENST00000486028 GNAQP50148 359 aa14.48□□□□□ -0.09
HMG20B-211ENST00000486028 FGD1P98174 961 aa14.48□□□□□ -0.09
HMG20B-211ENST00000486028 BLOC1S2Q6QNY1 142 aa14.48□□□□□ -0.09
HMG20B-211ENST00000486028 ZNF467Q7Z7K2 595 aaPredicted RBP14.48□□□□□ -0.09
HMG20B-211ENST00000486028 MSL3Q8N5Y2 521 aaKnown RBP14.48□□□□□ -0.09
HMG20B-211ENST00000486028 TINF2Q9BSI4 451 aa14.48□□□□□ -0.09
HMG20B-211ENST00000486028 JMJD4Q9H9V9 463 aa14.48□□□□□ -0.09
HMG20B-211ENST00000486028 A1CFQ9NQ94 594 aaKnown RBP14.48□□□□□ -0.09
HMG20B-211ENST00000486028 ABCB7O75027 752 aa14.47□□□□□ -0.09
HMG20B-211ENST00000486028 CNGA1P29973 690 aa14.47□□□□□ -0.09
HMG20B-211ENST00000486028 CCND3P30281 292 aaPredicted RBP14.47□□□□□ -0.09
HMG20B-211ENST00000486028 TRAF1Q13077 416 aa14.47□□□□□ -0.09
HMG20B-211ENST00000486028 QRICH1Q2TAL8 776 aa14.47□□□□□ -0.09
HMG20B-211ENST00000486028 USH1GQ495M9 461 aa14.47□□□□□ -0.09
HMG20B-211ENST00000486028 NSMFQ6X4W1 530 aa14.47□□□□□ -0.09
HMG20B-211ENST00000486028 SGMS1Q86VZ5 419 aa14.47□□□□□ -0.09
HMG20B-211ENST00000486028 FBXO11Q86XK2 927 aa14.47□□□□□ -0.09
HMG20B-211ENST00000486028 CLEC4DQ8WXI8 215 aa14.47□□□□□ -0.09
HMG20B-211ENST00000486028 LZTS2Q9BRK4 669 aa14.47□□□□□ -0.09
HMG20B-211ENST00000486028 MYL10Q9BUA6 226 aa14.47□□□□□ -0.09
HMG20B-211ENST00000486028 CRISPLD2Q9H0B8 497 aa14.47□□□□□ -0.09
HMG20B-211ENST00000486028 CYP39A1Q9NYL5 469 aa14.47□□□□□ -0.09
HMG20B-211ENST00000486028 NRBP1Q9UHY1 535 aa14.47□□□□□ -0.09
HMG20B-211ENST00000486028 ZNFX1Q9P2E3 1918 aaKnown RBP14.47□□□□□ -0.09
HMG20B-211ENST00000486028 ABCB11O95342 1321 aa14.46□□□□□ -0.09
HMG20B-211ENST00000486028 MSCO60682 206 aa14.46□□□□□ -0.09
HMG20B-211ENST00000486028 TAL1P17542 331 aaPredicted RBP14.46□□□□□ -0.09
HMG20B-211ENST00000486028 SMARCA1P28370 1054 aa14.46□□□□□ -0.09
HMG20B-211ENST00000486028 CNTN2Q02246 1040 aa14.46□□□□□ -0.09
HMG20B-211ENST00000486028 BAATQ14032 418 aaPredicted RBP14.46□□□□□ -0.09
HMG20B-211ENST00000486028 MAMDC4Q6UXC1 1216 aa14.46□□□□□ -0.09
HMG20B-211ENST00000486028 FAM133AQ8N9E0 248 aa14.46□□□□□ -0.09
HMG20B-211ENST00000486028 MTMR8Q96EF0 704 aa14.46□□□□□ -0.09
HMG20B-211ENST00000486028 TCEANC2Q96MN5 208 aa14.46□□□□□ -0.09
HMG20B-211ENST00000486028 AMNQ9BXJ7 453 aa14.46□□□□□ -0.09
HMG20B-211ENST00000486028 MAF1Q9H063 256 aa14.46□□□□□ -0.09
HMG20B-211ENST00000486028 RIOX1Q9H6W3 641 aa14.46□□□□□ -0.09
HMG20B-211ENST00000486028 CNPY2Q9Y2B0 182 aa14.46□□□□□ -0.09
HMG20B-211ENST00000486028 SYNGAP1Q96PV0 1343 aa14.45□□□□□ -0.1
HMG20B-211ENST00000486028 NFIBO00712 420 aa14.45□□□□□ -0.1
HMG20B-211ENST00000486028 ZBTB5O15062 677 aa14.45□□□□□ -0.1
HMG20B-211ENST00000486028 CYBAP13498 195 aa14.45□□□□□ -0.1
HMG20B-211ENST00000486028 PRAMEF19Q5SWL8 479 aa14.45□□□□□ -0.1
HMG20B-211ENST00000486028 RNF207Q6ZRF8 634 aa14.45□□□□□ -0.1
HMG20B-211ENST00000486028 MCF2L2Q86YR7 1114 aa14.45□□□□□ -0.1
HMG20B-211ENST00000486028 FANCBQ8NB91 859 aa14.45□□□□□ -0.1
HMG20B-211ENST00000486028 RGS22Q8NE09 1264 aa14.45□□□□□ -0.1
HMG20B-211ENST00000486028 TRPV1Q8NER1 839 aa14.45□□□□□ -0.1
HMG20B-211ENST00000486028 SHISA4Q96DD7 197 aa14.45□□□□□ -0.1
HMG20B-211ENST00000486028 DDX20Q9UHI6 824 aaKnown RBP14.45□□□□□ -0.1
HMG20B-211ENST00000486028 MRPL11Q9Y3B7 192 aaKnown RBP14.45□□□□□ -0.1
HMG20B-211ENST00000486028 PNMA6FA0A0J9YX94 578 aa14.44□□□□□ -0.1
HMG20B-211ENST00000486028 PTPDC1A2A3K4 754 aa14.44□□□□□ -0.1
HMG20B-211ENST00000486028 SOWAHBA6NEL2 793 aa14.44□□□□□ -0.1
HMG20B-211ENST00000486028 ASB14A6NK59 587 aa14.44□□□□□ -0.1
HMG20B-211ENST00000486028 ZBTB43O43298 467 aa14.44□□□□□ -0.1
HMG20B-211ENST00000486028 CPA1P15085 419 aa14.44□□□□□ -0.1
HMG20B-211ENST00000486028 CASTP20810 708 aaKnown RBP14.44□□□□□ -0.1
HMG20B-211ENST00000486028 RPS6KB1P23443 525 aa14.44□□□□□ -0.1
HMG20B-211ENST00000486028 SLC35G1Q2M3R5 365 aa14.44□□□□□ -0.1
HMG20B-211ENST00000486028 LHX8Q68G74 356 aa14.44□□□□□ -0.1
HMG20B-211ENST00000486028 APOA5Q6Q788 366 aa14.44□□□□□ -0.1
HMG20B-211ENST00000486028 HOMER1Q86YM7 354 aa14.44□□□□□ -0.1
HMG20B-211ENST00000486028 CCDC144CPQ8IYA2 1237 aa14.44□□□□□ -0.1
HMG20B-211ENST00000486028 FGD4Q96M96 766 aa14.44□□□□□ -0.1
HMG20B-211ENST00000486028 SPZ1Q9BXG8 430 aa14.44□□□□□ -0.1
HMG20B-211ENST00000486028 ADD3Q9UEY8 706 aaKnown RBP14.44□□□□□ -0.1
HMG20B-211ENST00000486028 OGDHLQ9ULD0 1010 aa14.44□□□□□ -0.1
HMG20B-211ENST00000486028 PCDHA1Q9Y5I3 950 aa14.44□□□□□ -0.1
HMG20B-211ENST00000486028 KLF18A0A0U1RQI7 1052 aa14.43□□□□□ -0.1
HMG20B-211ENST00000486028 SEPT4O43236 478 aa14.43□□□□□ -0.1
HMG20B-211ENST00000486028 CYTH3O43739 400 aa14.43□□□□□ -0.1
HMG20B-211ENST00000486028 FARP2O94887 1054 aaPredicted RBP14.43□□□□□ -0.1
HMG20B-211ENST00000486028 SNAI1O95863 264 aaPredicted RBP14.43□□□□□ -0.1
HMG20B-211ENST00000486028 RXRAP19793 462 aa14.43□□□□□ -0.1
HMG20B-211ENST00000486028 CALML3P27482 149 aa14.43□□□□□ -0.1
HMG20B-211ENST00000486028 Q6ZUG5 572 aa14.43□□□□□ -0.1
HMG20B-211ENST00000486028 MICU3Q86XE3 530 aa14.43□□□□□ -0.1
HMG20B-211ENST00000486028 RAB11FIP4Q86YS3 637 aa14.43□□□□□ -0.1
HMG20B-211ENST00000486028 FBXL16Q8N461 479 aa14.43□□□□□ -0.1
HMG20B-211ENST00000486028 SRBD1Q8N5C6 995 aaKnown RBP14.43□□□□□ -0.1
HMG20B-211ENST00000486028 ANKLE1Q8NAG6 615 aa14.43□□□□□ -0.1
HMG20B-211ENST00000486028 RRP36Q96EU6 259 aaKnown RBP14.43□□□□□ -0.1
HMG20B-211ENST00000486028 PIGSQ96S52 555 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms