RNA–Protein interactions for RNA: ENST00000485796.5

HDAC7-223, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-223ENST00000485796 CTCFP49711 727 aaPredicted RBP14.68□□□□□ -0.06
HDAC7-223ENST00000485796 NOM1Q5C9Z4 860 aaKnown RBP14.68□□□□□ -0.06
HDAC7-223ENST00000485796 CPLX2Q6PUV4 134 aaKnown RBP14.68□□□□□ -0.06
HDAC7-223ENST00000485796 GPR142Q7Z601 462 aa14.68□□□□□ -0.06
HDAC7-223ENST00000485796 SHCBP1Q8NEM2 672 aa14.68□□□□□ -0.06
HDAC7-223ENST00000485796 PURBQ96QR8 312 aaKnown RBP14.68□□□□□ -0.06
HDAC7-223ENST00000485796 AMNQ9BXJ7 453 aa14.68□□□□□ -0.06
HDAC7-223ENST00000485796 GJB4Q9NTQ9 266 aa14.68□□□□□ -0.06
HDAC7-223ENST00000485796 GABRQQ9UN88 632 aa14.68□□□□□ -0.06
HDAC7-223ENST00000485796 PCDHA1Q9Y5I3 950 aa14.68□□□□□ -0.06
HDAC7-223ENST00000485796 PTPDC1A2A3K4 754 aa14.67□□□□□ -0.06
HDAC7-223ENST00000485796 SLC25A27O95847 323 aa14.67□□□□□ -0.06
HDAC7-223ENST00000485796 CCNA1P78396 465 aa14.67□□□□□ -0.06
HDAC7-223ENST00000485796 SSRP1Q08945 709 aaKnown RBP14.67□□□□□ -0.06
HDAC7-223ENST00000485796 PFKFB3Q16875 520 aaPredicted RBP14.67□□□□□ -0.06
HDAC7-223ENST00000485796 HEATR3Q7Z4Q2 680 aa14.67□□□□□ -0.06
HDAC7-223ENST00000485796 PLEKHH3Q7Z736 793 aa14.67□□□□□ -0.06
HDAC7-223ENST00000485796 GJD2Q9UKL4 321 aa14.67□□□□□ -0.06
HDAC7-223ENST00000485796 STXBP3O00186 592 aa14.66□□□□□ -0.06
HDAC7-223ENST00000485796 TNPO2O14787 897 aaKnown RBP14.66□□□□□ -0.06
HDAC7-223ENST00000485796 COBLO75128 1261 aa14.66□□□□□ -0.06
HDAC7-223ENST00000485796 PGK2P07205 417 aa14.66□□□□□ -0.06
HDAC7-223ENST00000485796 SCG2P13521 617 aa14.66□□□□□ -0.06
HDAC7-223ENST00000485796 PTPREP23469 700 aa14.66□□□□□ -0.06
HDAC7-223ENST00000485796 FOSBP53539 338 aa14.66□□□□□ -0.06
HDAC7-223ENST00000485796 SMARCC2Q8TAQ2 1214 aa14.66□□□□□ -0.06
HDAC7-223ENST00000485796 RNF26Q9BY78 433 aaPredicted RBP14.66□□□□□ -0.06
HDAC7-223ENST00000485796 MROH8Q9H579 483 aa14.66□□□□□ -0.06
HDAC7-223ENST00000485796 FOXD4L1Q9NU39 408 aa14.66□□□□□ -0.06
HDAC7-223ENST00000485796 ORC3Q9UBD5 711 aaPredicted RBP14.66□□□□□ -0.06
HDAC7-223ENST00000485796 SEC63Q9UGP8 760 aaKnown RBP14.66□□□□□ -0.06
HDAC7-223ENST00000485796 RBM19Q9Y4C8 960 aaKnown RBP14.66□□□□□ -0.06
HDAC7-223ENST00000485796 DDX49Q9Y6V7 483 aaKnown RBP14.66□□□□□ -0.06
HDAC7-223ENST00000485796 ABCB11O95342 1321 aa14.66□□□□□ -0.06
HDAC7-223ENST00000485796 CDKL5O76039 1030 aa14.65□□□□□ -0.06
HDAC7-223ENST00000485796 MAPK4P31152 587 aa14.65□□□□□ -0.06
HDAC7-223ENST00000485796 ANP32AP39687 249 aaKnown RBP14.65□□□□□ -0.06
HDAC7-223ENST00000485796 FCGRTP55899 365 aa14.65□□□□□ -0.06
HDAC7-223ENST00000485796 AKAP17AQ02040 695 aaKnown RBP14.65□□□□□ -0.06
HDAC7-223ENST00000485796 PRKCZQ05513 592 aa14.65□□□□□ -0.06
HDAC7-223ENST00000485796 CUL4AQ13619 759 aa14.65□□□□□ -0.06
HDAC7-223ENST00000485796 BECN1Q14457 450 aa14.65□□□□□ -0.06
HDAC7-223ENST00000485796 TKFCQ3LXA3 575 aa14.65□□□□□ -0.06
HDAC7-223ENST00000485796 MORN1Q5T089 497 aa14.65□□□□□ -0.06
HDAC7-223ENST00000485796 NSMFQ6X4W1 530 aa14.65□□□□□ -0.06
HDAC7-223ENST00000485796 SLC30A10Q6XR72 485 aa14.65□□□□□ -0.06
HDAC7-223ENST00000485796 CCAR1Q8IX12 1150 aaKnown RBP14.65□□□□□ -0.06
HDAC7-223ENST00000485796 CHST13Q8NET6 341 aa14.65□□□□□ -0.06
HDAC7-223ENST00000485796 USP6NLQ92738 828 aa14.65□□□□□ -0.06
HDAC7-223ENST00000485796 ERO1AQ96HE7 468 aa14.65□□□□□ -0.06
HDAC7-223ENST00000485796 MMP19Q99542 508 aa14.65□□□□□ -0.06
HDAC7-223ENST00000485796 ACAD9Q9H845 621 aa14.65□□□□□ -0.06
HDAC7-223ENST00000485796 A1CFQ9NQ94 594 aaKnown RBP14.65□□□□□ -0.06
HDAC7-223ENST00000485796 VPS54Q9P1Q0 977 aa14.65□□□□□ -0.06
HDAC7-223ENST00000485796 ADORA2AP29274 412 aa14.64□□□□□ -0.07
HDAC7-223ENST00000485796 CNTN2Q02246 1040 aa14.64□□□□□ -0.07
HDAC7-223ENST00000485796 BAATQ14032 418 aaPredicted RBP14.64□□□□□ -0.07
HDAC7-223ENST00000485796 GRB14Q14449 540 aa14.64□□□□□ -0.07
HDAC7-223ENST00000485796 OTOP1Q7RTM1 612 aa14.64□□□□□ -0.07
HDAC7-223ENST00000485796 TRIM22Q8IYM9 498 aa14.64□□□□□ -0.07
HDAC7-223ENST00000485796 NPLOC4Q8TAT6 608 aa14.64□□□□□ -0.07
HDAC7-223ENST00000485796 FGD4Q96M96 766 aa14.64□□□□□ -0.07
HDAC7-223ENST00000485796 BARHL2Q9NY43 387 aa14.64□□□□□ -0.07
HDAC7-223ENST00000485796 COL20A1Q9P218 1284 aa14.64□□□□□ -0.07
HDAC7-223ENST00000485796 MRPL11Q9Y3B7 192 aaKnown RBP14.64□□□□□ -0.07
HDAC7-223ENST00000485796 TRIM17Q9Y577 477 aa14.64□□□□□ -0.07
HDAC7-223ENST00000485796 STK36Q9NRP7 1315 aa14.64□□□□□ -0.07
HDAC7-223ENST00000485796 SLC15A5A6NIM6 579 aa14.63□□□□□ -0.07
HDAC7-223ENST00000485796 DEXIO95424 95 aa14.63□□□□□ -0.07
HDAC7-223ENST00000485796 FCER1AP12319 257 aa14.63□□□□□ -0.07
HDAC7-223ENST00000485796 CYP2B6P20813 491 aa14.63□□□□□ -0.07
HDAC7-223ENST00000485796 HOXA13P31271 388 aaPredicted RBP14.63□□□□□ -0.07
HDAC7-223ENST00000485796 FLT3LGP49771 235 aa14.63□□□□□ -0.07
HDAC7-223ENST00000485796 KIF22Q14807 665 aa14.63□□□□□ -0.07
HDAC7-223ENST00000485796 UBE2SQ16763 222 aa14.63□□□□□ -0.07
HDAC7-223ENST00000485796 USP17L6PQ6QN14 398 aa14.63□□□□□ -0.07
HDAC7-223ENST00000485796 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.63□□□□□ -0.07
HDAC7-223ENST00000485796 ANKRD35Q8N283 1001 aa14.63□□□□□ -0.07
HDAC7-223ENST00000485796 LLPHQ9BRT6 129 aaKnown RBP14.63□□□□□ -0.07
HDAC7-223ENST00000485796 CWC22Q9HCG8 908 aaKnown RBP14.63□□□□□ -0.07
HDAC7-223ENST00000485796 CYP39A1Q9NYL5 469 aa14.63□□□□□ -0.07
HDAC7-223ENST00000485796 KCNJ14Q9UNX9 436 aa14.63□□□□□ -0.07
HDAC7-223ENST00000485796 PLXNB2O15031 1838 aa14.63□□□□□ -0.07
HDAC7-223ENST00000485796 ASTN1O14525 1302 aa14.63□□□□□ -0.07
HDAC7-223ENST00000485796 DNAJC25-GNG10A0A024R161 153 aa14.62□□□□□ -0.07
HDAC7-223ENST00000485796 SOWAHBA6NEL2 793 aa14.62□□□□□ -0.07
HDAC7-223ENST00000485796 SMCO2A6NFE2 343 aa14.62□□□□□ -0.07
HDAC7-223ENST00000485796 MGAMO43451 1857 aa14.62□□□□□ -0.07
HDAC7-223ENST00000485796 CFBP00751 764 aa14.62□□□□□ -0.07
HDAC7-223ENST00000485796 HSP90AA1P07900 732 aaKnown RBP14.62□□□□□ -0.07
HDAC7-223ENST00000485796 CALML3P27482 149 aa14.62□□□□□ -0.07
HDAC7-223ENST00000485796 COPB2P35606 906 aa14.62□□□□□ -0.07
HDAC7-223ENST00000485796 NAPAP54920 295 aa14.62□□□□□ -0.07
HDAC7-223ENST00000485796 RPS6P62753 249 aaKnown RBP14.62□□□□□ -0.07
HDAC7-223ENST00000485796 CCL14Q16627 93 aa14.62□□□□□ -0.07
HDAC7-223ENST00000485796 SPRYD3Q8NCJ5 442 aa14.62□□□□□ -0.07
HDAC7-223ENST00000485796 SYTL5Q8TDW5 730 aaPredicted RBP14.62□□□□□ -0.07
HDAC7-223ENST00000485796 ALG1Q9BT22 464 aa14.62□□□□□ -0.07
HDAC7-223ENST00000485796 FLRT1Q9NZU1 646 aa14.62□□□□□ -0.07
HDAC7-223ENST00000485796 SRRDQ9UH36 339 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms