RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 RNF219Q5W0B1 726 aaPredicted RBP5.89□□□□□ -1.47
USF3-202ENST00000478658 SNIP1Q8TAD8 396 aaKnown RBP5.89□□□□□ -1.47
USF3-202ENST00000478658 RBM42Q9BTD8 480 aaKnown RBP5.89□□□□□ -1.47
USF3-202ENST00000478658 PRRG3Q9BZD7 231 aa5.89□□□□□ -1.47
USF3-202ENST00000478658 CLEC11AQ9Y240 323 aa5.89□□□□□ -1.47
USF3-202ENST00000478658 H0Y626 953 aa5.89□□□□□ -1.47
USF3-202ENST00000478658 AP3B1O00203 1094 aa5.89□□□□□ -1.47
USF3-202ENST00000478658 F13A1P00488 732 aa5.89□□□□□ -1.47
USF3-202ENST00000478658 TMOD1P28289 359 aa5.89□□□□□ -1.47
USF3-202ENST00000478658 ATP6V1AP38606 617 aa5.89□□□□□ -1.47
USF3-202ENST00000478658 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.89□□□□□ -1.47
USF3-202ENST00000478658 IFIT5Q13325 482 aaKnown RBP5.89□□□□□ -1.47
USF3-202ENST00000478658 GRAMD4Q6IC98 578 aa5.89□□□□□ -1.47
USF3-202ENST00000478658 APOA5Q6Q788 366 aa5.89□□□□□ -1.47
USF3-202ENST00000478658 ANKRD13AQ8IZ07 590 aa5.89□□□□□ -1.47
USF3-202ENST00000478658 TMEM245Q9H330 911 aa5.89□□□□□ -1.47
USF3-202ENST00000478658 VEZTQ9HBM0 779 aa5.89□□□□□ -1.47
USF3-202ENST00000478658 KLHL14Q9P2G3 628 aa5.89□□□□□ -1.47
USF3-202ENST00000478658 PCDHGB3Q9Y5G1 929 aa5.89□□□□□ -1.47
USF3-202ENST00000478658 CHP2O43745 196 aa5.89□□□□□ -1.47
USF3-202ENST00000478658 TRIM16O95361 564 aa5.89□□□□□ -1.47
USF3-202ENST00000478658 MX2P20592 715 aa5.89□□□□□ -1.47
USF3-202ENST00000478658 WARSP23381 471 aaKnown RBP5.89□□□□□ -1.47
USF3-202ENST00000478658 ZRANB3Q5FWF4 1079 aa5.89□□□□□ -1.47
USF3-202ENST00000478658 WAPLQ7Z5K2 1190 aa5.89□□□□□ -1.47
USF3-202ENST00000478658 TRMT44Q8IYL2 757 aaKnown RBP5.89□□□□□ -1.47
USF3-202ENST00000478658 KRT12Q99456 494 aa5.89□□□□□ -1.47
USF3-202ENST00000478658 KLHL28Q9NXS3 571 aa5.89□□□□□ -1.47
USF3-202ENST00000478658 CAB39Q9Y376 341 aaPredicted RBP5.89□□□□□ -1.47
USF3-202ENST00000478658 MORC2Q9Y6X9 1032 aaPredicted RBP5.89□□□□□ -1.47
USF3-202ENST00000478658 KIF21BO75037 1637 aa5.89□□□□□ -1.47
USF3-202ENST00000478658 SAC3D1A6NKF1 404 aa5.89□□□□□ -1.47
USF3-202ENST00000478658 PEX1O43933 1283 aa5.89□□□□□ -1.47
USF3-202ENST00000478658 ARIH2O95376 493 aa5.89□□□□□ -1.47
USF3-202ENST00000478658 NNMTP40261 264 aa5.89□□□□□ -1.47
USF3-202ENST00000478658 GPR1P46091 355 aa5.89□□□□□ -1.47
USF3-202ENST00000478658 TFAP4Q01664 338 aa5.89□□□□□ -1.47
USF3-202ENST00000478658 COG2Q14746 738 aa5.89□□□□□ -1.47
USF3-202ENST00000478658 NCAPH2Q6IBW4 605 aa5.89□□□□□ -1.47
USF3-202ENST00000478658 CASC4Q6P4E1 433 aa5.89□□□□□ -1.47
USF3-202ENST00000478658 ZSCAN30Q86W11 494 aa5.89□□□□□ -1.47
USF3-202ENST00000478658 METTL23Q86XA0 190 aa5.89□□□□□ -1.47
USF3-202ENST00000478658 MTIF3Q9H2K0 278 aaKnown RBP5.89□□□□□ -1.47
USF3-202ENST00000478658 KRT82Q9NSB4 513 aa5.89□□□□□ -1.47
USF3-202ENST00000478658 DENND2AQ9ULE3 1009 aa5.89□□□□□ -1.47
USF3-202ENST00000478658 NCOA2Q15596 1464 aa5.89□□□□□ -1.47
USF3-202ENST00000478658 SMCO3A2RU48 225 aa5.89□□□□□ -1.47
USF3-202ENST00000478658 ELL2O00472 640 aaPredicted RBP5.89□□□□□ -1.47
USF3-202ENST00000478658 DEAF1O75398 565 aaPredicted RBP5.89□□□□□ -1.47
USF3-202ENST00000478658 PIK3CBP42338 1070 aa5.89□□□□□ -1.47
USF3-202ENST00000478658 NFIAQ12857 509 aa5.89□□□□□ -1.47
USF3-202ENST00000478658 SEPT2Q15019 361 aa5.89□□□□□ -1.47
USF3-202ENST00000478658 MFSD6Q6ZSS7 791 aa5.89□□□□□ -1.47
USF3-202ENST00000478658 VSIG1Q86XK7 387 aa5.89□□□□□ -1.47
USF3-202ENST00000478658 SYNPO2Q9UMS6 1093 aa5.89□□□□□ -1.47
USF3-202ENST00000478658 H3BRJ5 948 aa5.89□□□□□ -1.47
USF3-202ENST00000478658 WBP4O75554 376 aaKnown RBP5.89□□□□□ -1.47
USF3-202ENST00000478658 TNNT1P13805 278 aa5.89□□□□□ -1.47
USF3-202ENST00000478658 TAC1P20366 129 aa5.89□□□□□ -1.47
USF3-202ENST00000478658 KCNH2Q12809 1159 aa5.89□□□□□ -1.47
USF3-202ENST00000478658 KRT81Q14533 505 aa5.89□□□□□ -1.47
USF3-202ENST00000478658 AARS2Q5JTZ9 985 aaKnown RBP5.89□□□□□ -1.47
USF3-202ENST00000478658 TRIM59Q8IWR1 403 aa5.89□□□□□ -1.47
USF3-202ENST00000478658 THEMISQ8N1K5 641 aaPredicted RBP5.89□□□□□ -1.47
USF3-202ENST00000478658 SHCBP1Q8NEM2 672 aa5.89□□□□□ -1.47
USF3-202ENST00000478658 POMGNT1Q8WZA1 660 aa5.89□□□□□ -1.47
USF3-202ENST00000478658 ADPGKQ9BRR6 497 aa5.89□□□□□ -1.47
USF3-202ENST00000478658 BMP10O95393 424 aa5.89□□□□□ -1.47
USF3-202ENST00000478658 LDHAL6AQ6ZMR3 332 aa5.89□□□□□ -1.47
USF3-202ENST00000478658 ZBTB33Q86T24 672 aa5.89□□□□□ -1.47
USF3-202ENST00000478658 CNBD2Q96M20 576 aa5.89□□□□□ -1.47
USF3-202ENST00000478658 FGD4Q96M96 766 aa5.89□□□□□ -1.47
USF3-202ENST00000478658 SH3GL3Q99963 347 aa5.89□□□□□ -1.47
USF3-202ENST00000478658 GOLGA8SH3BPF8 625 aa5.88□□□□□ -1.47
USF3-202ENST00000478658 ZSCAN9O15535 394 aaPredicted RBP5.88□□□□□ -1.47
USF3-202ENST00000478658 KRT17Q04695 432 aa5.88□□□□□ -1.47
USF3-202ENST00000478658 PREPLQ4J6C6 727 aaPredicted RBP5.88□□□□□ -1.47
USF3-202ENST00000478658 CENPPQ6IPU0 288 aa5.88□□□□□ -1.47
USF3-202ENST00000478658 PALB2Q86YC2 1186 aa5.88□□□□□ -1.47
USF3-202ENST00000478658 ZNF248Q8NDW4 579 aa5.88□□□□□ -1.47
USF3-202ENST00000478658 WNK4Q96J92 1243 aa5.88□□□□□ -1.47
USF3-202ENST00000478658 CARD6Q9BX69 1037 aa5.88□□□□□ -1.47
USF3-202ENST00000478658 DBNLQ9UJU6 430 aaKnown RBP5.88□□□□□ -1.47
USF3-202ENST00000478658 PLCL2Q9UPR0 1127 aa5.88□□□□□ -1.47
USF3-202ENST00000478658 PA2G4Q9UQ80 394 aaKnown RBP5.88□□□□□ -1.47
USF3-202ENST00000478658 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.88□□□□□ -1.47
USF3-202ENST00000478658 N4BP3O15049 544 aa5.88□□□□□ -1.47
USF3-202ENST00000478658 SOGA1O94964 1423 aa5.88□□□□□ -1.47
USF3-202ENST00000478658 CUL1Q13616 776 aa5.88□□□□□ -1.47
USF3-202ENST00000478658 TERB1Q8NA31 727 aa5.88□□□□□ -1.47
USF3-202ENST00000478658 OSBPL9Q96SU4 736 aa5.88□□□□□ -1.47
USF3-202ENST00000478658 SNX5Q9Y5X3 404 aa5.88□□□□□ -1.47
USF3-202ENST00000478658 OPLAHO14841 1288 aa5.88□□□□□ -1.47
USF3-202ENST00000478658 SPOPO43791 374 aa5.88□□□□□ -1.47
USF3-202ENST00000478658 ILF2Q12905 390 aaKnown RBP5.88□□□□□ -1.47
USF3-202ENST00000478658 KRT79Q5XKE5 535 aa5.88□□□□□ -1.47
USF3-202ENST00000478658 PADI6Q6TGC4 694 aa5.88□□□□□ -1.47
USF3-202ENST00000478658 TOM1L2Q6ZVM7 507 aa5.88□□□□□ -1.47
USF3-202ENST00000478658 RRM2BQ7LG56 351 aa5.88□□□□□ -1.47
USF3-202ENST00000478658 ABI1Q8IZP0 508 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms