RNA–Protein interactions for RNA: ENST00000465950.5

SCAF11-205, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-205ENST00000465950 TMEM39AQ9NV64 488 aa10.5□□□□□ -0.73
SCAF11-205ENST00000465950 INO80Q9ULG1 1556 aaPredicted RBP10.5□□□□□ -0.73
SCAF11-205ENST00000465950 KLRF2D3W0D1 207 aa10.5□□□□□ -0.73
SCAF11-205ENST00000465950 CAPN9O14815 690 aa10.5□□□□□ -0.73
SCAF11-205ENST00000465950 MOCS3O95396 460 aa10.5□□□□□ -0.73
SCAF11-205ENST00000465950 SSTR3P32745 418 aaPredicted RBP10.5□□□□□ -0.73
SCAF11-205ENST00000465950 TEX2Q8IWB9 1127 aa10.5□□□□□ -0.73
SCAF11-205ENST00000465950 RABGGTAQ92696 567 aa10.5□□□□□ -0.73
SCAF11-205ENST00000465950 DDX19AQ9NUU7 478 aaKnown RBP10.5□□□□□ -0.73
SCAF11-205ENST00000465950 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.5□□□□□ -0.73
SCAF11-205ENST00000465950 SMCO2A6NFE2 343 aa10.49□□□□□ -0.73
SCAF11-205ENST00000465950 DDX39AO00148 427 aaKnown RBP10.49□□□□□ -0.73
SCAF11-205ENST00000465950 GDF11O95390 407 aa10.49□□□□□ -0.73
SCAF11-205ENST00000465950 SCP2P22307 547 aa10.49□□□□□ -0.73
SCAF11-205ENST00000465950 SLFN12LQ6IEE8 588 aa10.49□□□□□ -0.73
SCAF11-205ENST00000465950 ATP11BQ9Y2G3 1177 aa10.49□□□□□ -0.73
SCAF11-205ENST00000465950 KIF1AQ12756 1690 aa10.49□□□□□ -0.73
SCAF11-205ENST00000465950 ABCC12Q96J65 1359 aa10.49□□□□□ -0.73
SCAF11-205ENST00000465950 GH2P01242 217 aa10.49□□□□□ -0.73
SCAF11-205ENST00000465950 NFX1Q12986 1120 aaKnown RBP10.49□□□□□ -0.73
SCAF11-205ENST00000465950 BTBD8Q5XKL5 378 aa10.49□□□□□ -0.73
SCAF11-205ENST00000465950 DSTYKQ6XUX3 929 aa10.49□□□□□ -0.73
SCAF11-205ENST00000465950 SCFD2Q8WU76 684 aa10.49□□□□□ -0.73
SCAF11-205ENST00000465950 CAPNS2Q96L46 248 aa10.49□□□□□ -0.73
SCAF11-205ENST00000465950 LLPHQ9BRT6 129 aaKnown RBP10.49□□□□□ -0.73
SCAF11-205ENST00000465950 PRR29P0C7W0 189 aa10.49□□□□□ -0.73
SCAF11-205ENST00000465950 GYS1P13807 737 aa10.49□□□□□ -0.73
SCAF11-205ENST00000465950 CREMQ03060 361 aa10.49□□□□□ -0.73
SCAF11-205ENST00000465950 PDXDC2PQ6P474 469 aa10.49□□□□□ -0.73
SCAF11-205ENST00000465950 IFNL3Q8IZI9 196 aa10.49□□□□□ -0.73
SCAF11-205ENST00000465950 FAN1Q9Y2M0 1017 aa10.49□□□□□ -0.73
SCAF11-205ENST00000465950 CETN3O15182 167 aa10.49□□□□□ -0.73
SCAF11-205ENST00000465950 CCNT1O60563 726 aaKnown RBP10.49□□□□□ -0.73
SCAF11-205ENST00000465950 MAP2K2P36507 400 aa10.49□□□□□ -0.73
SCAF11-205ENST00000465950 PDE6CP51160 858 aa10.49□□□□□ -0.73
SCAF11-205ENST00000465950 RSRC2Q7L4I2 434 aaKnown RBP10.49□□□□□ -0.73
SCAF11-205ENST00000465950 EHBP1Q8NDI1 1231 aa10.49□□□□□ -0.73
SCAF11-205ENST00000465950 TTLL11Q8NHH1 800 aa10.49□□□□□ -0.73
SCAF11-205ENST00000465950 TRERF1Q96PN7 1200 aa10.49□□□□□ -0.73
SCAF11-205ENST00000465950 DCTPP1Q9H773 170 aa10.49□□□□□ -0.73
SCAF11-205ENST00000465950 ADAMTS13Q76LX8 1427 aa10.49□□□□□ -0.73
SCAF11-205ENST00000465950 GOLGA6L10A0A0M3HER8 536 aa10.49□□□□□ -0.73
SCAF11-205ENST00000465950 UBE2Q2LH0YL09 131 aa10.49□□□□□ -0.73
SCAF11-205ENST00000465950 LAD1O00515 517 aa10.49□□□□□ -0.73
SCAF11-205ENST00000465950 PPATQ06203 517 aa10.49□□□□□ -0.73
SCAF11-205ENST00000465950 FAM102BQ5T8I3 360 aa10.49□□□□□ -0.73
SCAF11-205ENST00000465950 CEP85Q6P2H3 762 aa10.49□□□□□ -0.73
SCAF11-205ENST00000465950 CTU1Q7Z7A3 348 aaKnown RBP10.49□□□□□ -0.73
SCAF11-205ENST00000465950 CTNNBL1Q8WYA6 563 aaPredicted RBP10.49□□□□□ -0.73
SCAF11-205ENST00000465950 NCAPGQ9BPX3 1015 aa10.49□□□□□ -0.73
SCAF11-205ENST00000465950 CCDC77Q9BR77 488 aa10.49□□□□□ -0.73
SCAF11-205ENST00000465950 SEPT9Q9UHD8 586 aaPredicted RBP10.49□□□□□ -0.73
SCAF11-205ENST00000465950 MYPNQ86TC9 1320 aa10.48□□□□□ -0.73
SCAF11-205ENST00000465950 ABL1P00519 1130 aa10.48□□□□□ -0.73
SCAF11-205ENST00000465950 FAM177A1Q8N128 213 aaPredicted RBP10.48□□□□□ -0.73
SCAF11-205ENST00000465950 PHKBQ93100 1093 aa10.48□□□□□ -0.73
SCAF11-205ENST00000465950 FAM8A1Q9UBU6 413 aa10.48□□□□□ -0.73
SCAF11-205ENST00000465950 CPSF3Q9UKF6 684 aaKnown RBP10.48□□□□□ -0.73
SCAF11-205ENST00000465950 ABCC4O15439 1325 aa10.48□□□□□ -0.73
SCAF11-205ENST00000465950 ABCA6Q8N139 1617 aa10.48□□□□□ -0.73
SCAF11-205ENST00000465950 LAMC2Q13753 1193 aa10.48□□□□□ -0.73
SCAF11-205ENST00000465950 STAMQ92783 540 aa10.48□□□□□ -0.73
SCAF11-205ENST00000465950 ZNF577Q9BSK1 485 aa10.48□□□□□ -0.73
SCAF11-205ENST00000465950 H7C1W4 665 aa10.48□□□□□ -0.73
SCAF11-205ENST00000465950 INO80B-WBP1J3KQ70 363 aa10.48□□□□□ -0.73
SCAF11-205ENST00000465950 CYBBP04839 570 aa10.48□□□□□ -0.73
SCAF11-205ENST00000465950 GAP43P17677 238 aa10.48□□□□□ -0.73
SCAF11-205ENST00000465950 SNX17Q15036 470 aa10.48□□□□□ -0.73
SCAF11-205ENST00000465950 PDXDC1Q6P996 788 aa10.48□□□□□ -0.73
SCAF11-205ENST00000465950 MCPH1Q8NEM0 835 aa10.48□□□□□ -0.73
SCAF11-205ENST00000465950 CGNQ9P2M7 1197 aaKnown RBP10.48□□□□□ -0.73
SCAF11-205ENST00000465950 FBXL21Q9UKT6 434 aa10.48□□□□□ -0.73
SCAF11-205ENST00000465950 FLT1P17948 1338 aa10.48□□□□□ -0.73
SCAF11-205ENST00000465950 LRRIQ4A6NIV6 560 aa10.48□□□□□ -0.73
SCAF11-205ENST00000465950 NCAM2O15394 837 aa10.48□□□□□ -0.73
SCAF11-205ENST00000465950 GNA14O95837 355 aa10.48□□□□□ -0.73
SCAF11-205ENST00000465950 HSP90B2PQ58FF3 399 aa10.48□□□□□ -0.73
SCAF11-205ENST00000465950 FKBP1CQ5VVH2 108 aa10.48□□□□□ -0.73
SCAF11-205ENST00000465950 CES5AQ6NT32 575 aa10.48□□□□□ -0.73
SCAF11-205ENST00000465950 FAM83AQ86UY5 434 aa10.48□□□□□ -0.73
SCAF11-205ENST00000465950 EFCAB13Q8IY85 973 aa10.48□□□□□ -0.73
SCAF11-205ENST00000465950 MYCT1Q8N699 235 aa10.48□□□□□ -0.73
SCAF11-205ENST00000465950 POLIQ9UNA4 740 aa10.48□□□□□ -0.73
SCAF11-205ENST00000465950 PCDHB7Q9Y5E2 793 aa10.48□□□□□ -0.73
SCAF11-205ENST00000465950 COL4A3BPQ9Y5P4 624 aa10.48□□□□□ -0.73
SCAF11-205ENST00000465950 GSTTP1A0A1W2PQM5 241 aa10.47□□□□□ -0.73
SCAF11-205ENST00000465950 TMEM132BQ14DG7 1078 aa10.47□□□□□ -0.73
SCAF11-205ENST00000465950 MAP1SQ66K74 1059 aaPredicted RBP10.47□□□□□ -0.73
SCAF11-205ENST00000465950 LRRC47Q8N1G4 583 aaKnown RBP10.47□□□□□ -0.73
SCAF11-205ENST00000465950 SNX29Q8TEQ0 813 aa10.47□□□□□ -0.73
SCAF11-205ENST00000465950 NAA15Q9BXJ9 866 aaKnown RBP10.47□□□□□ -0.73
SCAF11-205ENST00000465950 SEC31BQ9NQW1 1179 aa10.47□□□□□ -0.73
SCAF11-205ENST00000465950 LSM7Q9UK45 103 aaKnown RBP10.47□□□□□ -0.73
SCAF11-205ENST00000465950 EIF3DO15371 548 aaKnown RBP eCLIP10.47□□□□□ -0.73
SCAF11-205ENST00000465950 LDHAP00338 332 aaKnown RBP10.47□□□□□ -0.73
SCAF11-205ENST00000465950 Q3C1V9 767 aa10.47□□□□□ -0.73
SCAF11-205ENST00000465950 TWF2Q6IBS0 349 aaKnown RBP10.47□□□□□ -0.73
SCAF11-205ENST00000465950 RPAP3Q9H6T3 665 aaPredicted RBP10.47□□□□□ -0.73
SCAF11-205ENST00000465950 IKBKGQ9Y6K9 419 aa10.47□□□□□ -0.73
SCAF11-205ENST00000465950 B4E1Z4 1266 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms