RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 FRMPD3Q5JV73 1810 aa17.42■□□□□ 0.38
ATG4B-213ENST00000460211 ZNF236Q9UL36 1845 aa17.42■□□□□ 0.38
ATG4B-213ENST00000460211 DNAJC25-GNG10A0A024R161 153 aa17.42■□□□□ 0.38
ATG4B-213ENST00000460211 POTEB2H3BUK9 544 aa17.42■□□□□ 0.38
ATG4B-213ENST00000460211 PRC1O43663 620 aa17.42■□□□□ 0.38
ATG4B-213ENST00000460211 IGHA2P01877 340 aa17.42■□□□□ 0.38
ATG4B-213ENST00000460211 COL6A1P12109 1028 aa17.42■□□□□ 0.38
ATG4B-213ENST00000460211 LHX8Q68G74 356 aa17.42■□□□□ 0.38
ATG4B-213ENST00000460211 ZNF467Q7Z7K2 595 aaPredicted RBP17.42■□□□□ 0.38
ATG4B-213ENST00000460211 DDX20Q9UHI6 824 aaKnown RBP17.42■□□□□ 0.38
ATG4B-213ENST00000460211 CNPY2Q9Y2B0 182 aa17.42■□□□□ 0.38
ATG4B-213ENST00000460211 STXBP5LQ9Y2K9 1186 aa17.42■□□□□ 0.38
ATG4B-213ENST00000460211 WDR19Q8NEZ3 1342 aa17.42■□□□□ 0.38
ATG4B-213ENST00000460211 CUL9Q8IWT3 2517 aa17.41■□□□□ 0.38
ATG4B-213ENST00000460211 CYBAP13498 195 aa17.41■□□□□ 0.38
ATG4B-213ENST00000460211 NFXL1Q6ZNB6 911 aa17.41■□□□□ 0.38
ATG4B-213ENST00000460211 ADGRF4Q8IZF3 695 aa17.41■□□□□ 0.38
ATG4B-213ENST00000460211 IGDCC4Q8TDY8 1250 aa17.41■□□□□ 0.38
ATG4B-213ENST00000460211 A1CFQ9NQ94 594 aaKnown RBP17.41■□□□□ 0.38
ATG4B-213ENST00000460211 DNAH12Q6ZR08 3092 aa17.4■□□□□ 0.38
ATG4B-213ENST00000460211 KLRF2D3W0D1 207 aa17.4■□□□□ 0.38
ATG4B-213ENST00000460211 ANTXR2P58335 489 aa17.4■□□□□ 0.38
ATG4B-213ENST00000460211 CDC37Q16543 378 aaPredicted RBP17.4■□□□□ 0.38
ATG4B-213ENST00000460211 TSGA10IPQ3SY00 556 aa17.4■□□□□ 0.38
ATG4B-213ENST00000460211 MAMDC4Q6UXC1 1216 aa17.4■□□□□ 0.38
ATG4B-213ENST00000460211 NSMFQ6X4W1 530 aa17.4■□□□□ 0.38
ATG4B-213ENST00000460211 NEK1Q96PY6 1258 aa17.4■□□□□ 0.38
ATG4B-213ENST00000460211 VAT1LQ9HCJ6 419 aa17.4■□□□□ 0.38
ATG4B-213ENST00000460211 SYNGAP1Q96PV0 1343 aa17.4■□□□□ 0.38
ATG4B-213ENST00000460211 CCDC69A6NI79 296 aa17.39■□□□□ 0.37
ATG4B-213ENST00000460211 SEPT4O43236 478 aa17.39■□□□□ 0.37
ATG4B-213ENST00000460211 HMGB1P09429 215 aaKnown RBP17.39■□□□□ 0.37
ATG4B-213ENST00000460211 KIF5BP33176 963 aa17.39■□□□□ 0.37
ATG4B-213ENST00000460211 TRAF1Q13077 416 aa17.39■□□□□ 0.37
ATG4B-213ENST00000460211 GRM4Q14833 912 aa17.39■□□□□ 0.37
ATG4B-213ENST00000460211 MUM1L1Q5H9M0 696 aa17.39■□□□□ 0.37
ATG4B-213ENST00000460211 PRAMEF19Q5SWL8 479 aa17.39■□□□□ 0.37
ATG4B-213ENST00000460211 CTCFLQ8NI51 663 aaPredicted RBP17.39■□□□□ 0.37
ATG4B-213ENST00000460211 NUP133Q8WUM0 1156 aa17.39■□□□□ 0.37
ATG4B-213ENST00000460211 SENP6Q9GZR1 1112 aaPredicted RBP17.39■□□□□ 0.37
ATG4B-213ENST00000460211 CPVLQ9H3G5 476 aa17.39■□□□□ 0.37
ATG4B-213ENST00000460211 CYP39A1Q9NYL5 469 aa17.39■□□□□ 0.37
ATG4B-213ENST00000460211 UNC80Q8N2C7 3258 aa17.39■□□□□ 0.37
ATG4B-213ENST00000460211 PALM3A6NDB9 673 aaPredicted RBP17.38■□□□□ 0.37
ATG4B-213ENST00000460211 ASB14A6NK59 587 aa17.38■□□□□ 0.37
ATG4B-213ENST00000460211 LIFRP42702 1097 aa17.38■□□□□ 0.37
ATG4B-213ENST00000460211 SYNE3Q6ZMZ3 975 aa17.38■□□□□ 0.37
ATG4B-213ENST00000460211 FBXO11Q86XK2 927 aa17.38■□□□□ 0.37
ATG4B-213ENST00000460211 STAG2Q8N3U4 1231 aa17.38■□□□□ 0.37
ATG4B-213ENST00000460211 FAM133AQ8N9E0 248 aa17.38■□□□□ 0.37
ATG4B-213ENST00000460211 ARRDC4Q8NCT1 418 aa17.38■□□□□ 0.37
ATG4B-213ENST00000460211 TRPV1Q8NER1 839 aa17.38■□□□□ 0.37
ATG4B-213ENST00000460211 FAM161BQ96MY7 647 aa17.38■□□□□ 0.37
ATG4B-213ENST00000460211 MAP3K14Q99558 947 aa17.38■□□□□ 0.37
ATG4B-213ENST00000460211 MAF1Q9H063 256 aa17.38■□□□□ 0.37
ATG4B-213ENST00000460211 LY9Q9HBG7 655 aa17.38■□□□□ 0.37
ATG4B-213ENST00000460211 ADD3Q9UEY8 706 aaKnown RBP17.38■□□□□ 0.37
ATG4B-213ENST00000460211 MAD2L2Q9UI95 211 aa17.38■□□□□ 0.37
ATG4B-213ENST00000460211 ZNFX1Q9P2E3 1918 aaKnown RBP17.37■□□□□ 0.37
ATG4B-213ENST00000460211 PTPDC1A2A3K4 754 aa17.37■□□□□ 0.37
ATG4B-213ENST00000460211 SH2B2O14492 632 aaPredicted RBP17.37■□□□□ 0.37
ATG4B-213ENST00000460211 EPB41L2O43491 1005 aaKnown RBP17.37■□□□□ 0.37
ATG4B-213ENST00000460211 DDAH1O94760 285 aa17.37■□□□□ 0.37
ATG4B-213ENST00000460211 CALM1P0DP23 149 aa17.37■□□□□ 0.37
ATG4B-213ENST00000460211 CALM2P0DP24 149 aa17.37■□□□□ 0.37
ATG4B-213ENST00000460211 CALM3P0DP25 149 aa17.37■□□□□ 0.37
ATG4B-213ENST00000460211 ATN1P54259 1190 aaPredicted RBP17.37■□□□□ 0.37
ATG4B-213ENST00000460211 CNTN2Q02246 1040 aa17.37■□□□□ 0.37
ATG4B-213ENST00000460211 TROAPQ12815 778 aa17.37■□□□□ 0.37
ATG4B-213ENST00000460211 BAATQ14032 418 aaPredicted RBP17.37■□□□□ 0.37
ATG4B-213ENST00000460211 QRICH1Q2TAL8 776 aa17.37■□□□□ 0.37
ATG4B-213ENST00000460211 USH1GQ495M9 461 aa17.37■□□□□ 0.37
ATG4B-213ENST00000460211 DHX32Q7L7V1 743 aaKnown RBP17.37■□□□□ 0.37
ATG4B-213ENST00000460211 MCF2L2Q86YR7 1114 aa17.37■□□□□ 0.37
ATG4B-213ENST00000460211 ZNF654Q8IZM8 581 aa17.37■□□□□ 0.37
ATG4B-213ENST00000460211 ABHD16BQ9H3Z7 469 aa17.37■□□□□ 0.37
ATG4B-213ENST00000460211 JMJD4Q9H9V9 463 aa17.37■□□□□ 0.37
ATG4B-213ENST00000460211 SENP2Q9HC62 589 aa17.37■□□□□ 0.37
ATG4B-213ENST00000460211 MRPL11Q9Y3B7 192 aaKnown RBP17.37■□□□□ 0.37
ATG4B-213ENST00000460211 SLC12A7Q9Y666 1083 aa17.37■□□□□ 0.37
ATG4B-213ENST00000460211 ABCB11O95342 1321 aa17.37■□□□□ 0.37
ATG4B-213ENST00000460211 LAMA2P24043 3122 aaKnown RBP17.36■□□□□ 0.37
ATG4B-213ENST00000460211 NFIBO00712 420 aa17.36■□□□□ 0.37
ATG4B-213ENST00000460211 RARBP10826 455 aa17.36■□□□□ 0.37
ATG4B-213ENST00000460211 AKR1A1P14550 325 aa17.36■□□□□ 0.37
ATG4B-213ENST00000460211 HSPA4P34932 840 aa17.36■□□□□ 0.37
ATG4B-213ENST00000460211 GNAQP50148 359 aa17.36■□□□□ 0.37
ATG4B-213ENST00000460211 RNF207Q6ZRF8 634 aa17.36■□□□□ 0.37
ATG4B-213ENST00000460211 MPHOSPH6Q99547 160 aaKnown RBP17.36■□□□□ 0.37
ATG4B-213ENST00000460211 LBHD1Q9BQE6 289 aaPredicted RBP17.36■□□□□ 0.37
ATG4B-213ENST00000460211 LZTS2Q9BRK4 669 aa17.36■□□□□ 0.37
ATG4B-213ENST00000460211 AMNQ9BXJ7 453 aa17.36■□□□□ 0.37
ATG4B-213ENST00000460211 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.36■□□□□ 0.37
ATG4B-213ENST00000460211 ZHX1Q9UKY1 873 aaPredicted RBP17.36■□□□□ 0.37
ATG4B-213ENST00000460211 FAM184BQ9ULE4 1060 aa17.36■□□□□ 0.37
ATG4B-213ENST00000460211 LOC102724159A0A0B4J2E5 919 aa17.35■□□□□ 0.37
ATG4B-213ENST00000460211 B4DLN1 442 aa17.35■□□□□ 0.37
ATG4B-213ENST00000460211 ZBTB5O15062 677 aa17.35■□□□□ 0.37
ATG4B-213ENST00000460211 EIF5BO60841 1220 aaKnown RBP17.35■□□□□ 0.37
ATG4B-213ENST00000460211 SNAI1O95863 264 aaPredicted RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms