RNA–Protein interactions for RNA: ENST00000458478.5

RPSA-204, Transcript of ribosomal protein SA, humanhuman

TSL 2

Gene RPSA, Length 874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-204ENST00000458478 FPGSQ05932 587 aa13.31□□□□□ -0.28
RPSA-204ENST00000458478 NMIQ13287 307 aaPredicted RBP13.31□□□□□ -0.28
RPSA-204ENST00000458478 RRP12Q5JTH9 1297 aaKnown RBP13.31□□□□□ -0.28
RPSA-204ENST00000458478 BTNL9Q6UXG8 535 aa13.31□□□□□ -0.28
RPSA-204ENST00000458478 ZNF589Q86UQ0 364 aaPredicted RBP13.31□□□□□ -0.28
RPSA-204ENST00000458478 TICAM2Q86XR7 235 aa13.31□□□□□ -0.28
RPSA-204ENST00000458478 PURBQ96QR8 312 aaKnown RBP13.31□□□□□ -0.28
RPSA-204ENST00000458478 CDX2Q99626 313 aaPredicted RBP13.31□□□□□ -0.28
RPSA-204ENST00000458478 LNPKQ9C0E8 428 aa13.31□□□□□ -0.28
RPSA-204ENST00000458478 TOMM22Q9NS69 142 aa13.31□□□□□ -0.28
RPSA-204ENST00000458478 TCP11L1Q9NUJ3 509 aa13.31□□□□□ -0.28
RPSA-204ENST00000458478 GNEQ9Y223 722 aaKnown RBP13.31□□□□□ -0.28
RPSA-204ENST00000458478 CDH23Q9H251 3354 aa13.31□□□□□ -0.28
RPSA-204ENST00000458478 TRIM6-TRIM34B2RNG4 842 aa13.3□□□□□ -0.28
RPSA-204ENST00000458478 ARVCFO00192 962 aa13.3□□□□□ -0.28
RPSA-204ENST00000458478 ICAM1P05362 532 aa13.3□□□□□ -0.28
RPSA-204ENST00000458478 TOP1P11387 765 aaKnown RBP13.3□□□□□ -0.28
RPSA-204ENST00000458478 PTGS1P23219 599 aa13.3□□□□□ -0.28
RPSA-204ENST00000458478 HAND2P61296 217 aa13.3□□□□□ -0.28
RPSA-204ENST00000458478 CCDC96Q2M329 555 aa13.3□□□□□ -0.28
RPSA-204ENST00000458478 TMEM63BQ5T3F8 832 aa13.3□□□□□ -0.28
RPSA-204ENST00000458478 B4GALNT3Q6L9W6 998 aa13.3□□□□□ -0.28
RPSA-204ENST00000458478 TAPT1Q6NXT6 567 aa13.3□□□□□ -0.28
RPSA-204ENST00000458478 NOL8Q76FK4 1167 aaKnown RBP13.3□□□□□ -0.28
RPSA-204ENST00000458478 RILPL2Q969X0 211 aa13.3□□□□□ -0.28
RPSA-204ENST00000458478 RNPC3Q96LT9 517 aaKnown RBP13.3□□□□□ -0.28
RPSA-204ENST00000458478 RANBP17Q9H2T7 1088 aaKnown RBP13.3□□□□□ -0.28
RPSA-204ENST00000458478 TTYH1Q9H313 450 aaPredicted RBP13.3□□□□□ -0.28
RPSA-204ENST00000458478 GPCPD1Q9NPB8 672 aa13.3□□□□□ -0.28
RPSA-204ENST00000458478 PDGFCQ9NRA1 345 aa13.3□□□□□ -0.28
RPSA-204ENST00000458478 TBX21Q9UL17 535 aa13.3□□□□□ -0.28
RPSA-204ENST00000458478 CCPG1Q9ULG6 757 aa13.3□□□□□ -0.28
RPSA-204ENST00000458478 MROH7Q68CQ1 1323 aa13.3□□□□□ -0.28
RPSA-204ENST00000458478 A0A0U1RQG5 324 aaPredicted RBP13.29□□□□□ -0.28
RPSA-204ENST00000458478 DYNC1LI2O43237 492 aaPredicted RBP13.29□□□□□ -0.28
RPSA-204ENST00000458478 SMPD1P17405 629 aa13.29□□□□□ -0.28
RPSA-204ENST00000458478 SYDE2Q5VT97 1194 aa13.29□□□□□ -0.28
RPSA-204ENST00000458478 IQSEC1Q6DN90 963 aa13.29□□□□□ -0.28
RPSA-204ENST00000458478 MFSD5Q6N075 450 aa13.29□□□□□ -0.28
RPSA-204ENST00000458478 NSMFQ6X4W1 530 aa13.29□□□□□ -0.28
RPSA-204ENST00000458478 C16orf59Q7L2K0 433 aa13.29□□□□□ -0.28
RPSA-204ENST00000458478 EEPD1Q7L9B9 569 aa13.29□□□□□ -0.28
RPSA-204ENST00000458478 FAM126BQ8IXS8 530 aa13.29□□□□□ -0.28
RPSA-204ENST00000458478 SMC5Q8IY18 1101 aa13.29□□□□□ -0.28
RPSA-204ENST00000458478 FRMPD2Q68DX3 1309 aaPredicted RBP13.29□□□□□ -0.28
RPSA-204ENST00000458478 EYSQ5T1H1 3165 aa13.28□□□□□ -0.28
RPSA-204ENST00000458478 CD4P01730 458 aa13.28□□□□□ -0.28
RPSA-204ENST00000458478 IGHDP01880 384 aa13.28□□□□□ -0.28
RPSA-204ENST00000458478 SDSP20132 328 aa13.28□□□□□ -0.28
RPSA-204ENST00000458478 BAATQ14032 418 aaPredicted RBP13.28□□□□□ -0.28
RPSA-204ENST00000458478 AKNAD1Q5T1N1 836 aa13.28□□□□□ -0.28
RPSA-204ENST00000458478 CXCL17Q6UXB2 119 aa13.28□□□□□ -0.28
RPSA-204ENST00000458478 MFSD6Q6ZSS7 791 aa13.28□□□□□ -0.28
RPSA-204ENST00000458478 TLK2Q86UE8 772 aa13.28□□□□□ -0.28
RPSA-204ENST00000458478 FBXO16Q8IX29 292 aaPredicted RBP13.28□□□□□ -0.28
RPSA-204ENST00000458478 SLC43A3Q8NBI5 491 aa13.28□□□□□ -0.28
RPSA-204ENST00000458478 MORC4Q8TE76 937 aa13.28□□□□□ -0.28
RPSA-204ENST00000458478 TTC14Q96N46 770 aa13.28□□□□□ -0.28
RPSA-204ENST00000458478 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.28□□□□□ -0.28not detected■■■□□ 17
RPSA-204ENST00000458478 AP5M1Q9H0R1 490 aa13.28□□□□□ -0.28
RPSA-204ENST00000458478 RWDD1Q9H446 243 aaPredicted RBP13.28□□□□□ -0.28
RPSA-204ENST00000458478 CCDC171Q6TFL3 1326 aa13.28□□□□□ -0.28
RPSA-204ENST00000458478 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.27□□□□□ -0.29
RPSA-204ENST00000458478 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.27□□□□□ -0.29
RPSA-204ENST00000458478 NFIBO00712 420 aa13.27□□□□□ -0.29
RPSA-204ENST00000458478 PDHBP11177 359 aa13.27□□□□□ -0.29
RPSA-204ENST00000458478 CSF2RAP15509 400 aa13.27□□□□□ -0.29
RPSA-204ENST00000458478 AAMPQ13685 434 aa13.27□□□□□ -0.29
RPSA-204ENST00000458478 FSCN1Q16658 493 aaKnown RBP13.27□□□□□ -0.29
RPSA-204ENST00000458478 TMEM240Q5SV17 173 aa13.27□□□□□ -0.29
RPSA-204ENST00000458478 KIAA1211Q6ZU35 1233 aa13.27□□□□□ -0.29
RPSA-204ENST00000458478 TBC1D10CQ8IV04 446 aa13.27□□□□□ -0.29
RPSA-204ENST00000458478 PLEKHM2Q8IWE5 1019 aa13.27□□□□□ -0.29
RPSA-204ENST00000458478 CLEC4DQ8WXI8 215 aa13.27□□□□□ -0.29
RPSA-204ENST00000458478 Q9Y3F1 56 aa13.27□□□□□ -0.29
RPSA-204ENST00000458478 GRIN2DO15399 1336 aa13.27□□□□□ -0.29
RPSA-204ENST00000458478 ZMYM6O95789 1325 aa13.27□□□□□ -0.29
RPSA-204ENST00000458478 TLR3O15455 904 aaKnown RBP13.26□□□□□ -0.29
RPSA-204ENST00000458478 CABYRO75952 493 aa13.26□□□□□ -0.29
RPSA-204ENST00000458478 LCTP09848 1927 aa13.26□□□□□ -0.29
RPSA-204ENST00000458478 PCP11498 1178 aaKnown RBP13.26□□□□□ -0.29
RPSA-204ENST00000458478 CYP2C18P33260 490 aa13.26□□□□□ -0.29
RPSA-204ENST00000458478 PPIGQ13427 754 aaKnown RBP eCLIP13.26□□□□□ -0.29
RPSA-204ENST00000458478 ITGA7Q13683 1181 aa13.26□□□□□ -0.29
RPSA-204ENST00000458478 CHD1LQ86WJ1 897 aa13.26□□□□□ -0.29
RPSA-204ENST00000458478 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.26□□□□□ -0.29not detected■□□□□ 9.7
RPSA-204ENST00000458478 TMEM199Q8N511 208 aa13.26□□□□□ -0.29
RPSA-204ENST00000458478 MYLIPQ8WY64 445 aa13.26□□□□□ -0.29
RPSA-204ENST00000458478 PPP1R12CQ9BZL4 782 aa13.26□□□□□ -0.29
RPSA-204ENST00000458478 OSBPL3Q9H4L5 887 aa13.26□□□□□ -0.29
RPSA-204ENST00000458478 VTA1Q9NP79 307 aa13.26□□□□□ -0.29
RPSA-204ENST00000458478 PTPDC1A2A3K4 754 aa13.25□□□□□ -0.29
RPSA-204ENST00000458478 ZNF213O14771 459 aa13.25□□□□□ -0.29
RPSA-204ENST00000458478 ZEB2O60315 1214 aa13.25□□□□□ -0.29
RPSA-204ENST00000458478 SNHG28P0DPA3 235 aa13.25□□□□□ -0.29
RPSA-204ENST00000458478 ACRP10323 421 aa13.25□□□□□ -0.29
RPSA-204ENST00000458478 ALDH5A1P51649 535 aaPredicted RBP13.25□□□□□ -0.29
RPSA-204ENST00000458478 MFAP1P55081 439 aaKnown RBP13.25□□□□□ -0.29
RPSA-204ENST00000458478 PSMC6P62333 389 aa13.25□□□□□ -0.29
RPSA-204ENST00000458478 NUCB1Q02818 461 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms