RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 GBP3Q9H0R5 595 aa8.01□□□□□ -1.13
HMGB3P5-201ENST00000428894 HRKO00198 91 aa8□□□□□ -1.13
HMGB3P5-201ENST00000428894 NUAK1O60285 661 aa8□□□□□ -1.13
HMGB3P5-201ENST00000428894 PPM1BO75688 479 aa8□□□□□ -1.13
HMGB3P5-201ENST00000428894 EPHX1P07099 455 aa8□□□□□ -1.13
HMGB3P5-201ENST00000428894 IFNGR1P15260 489 aa8□□□□□ -1.13
HMGB3P5-201ENST00000428894 VIPR1P32241 457 aa8□□□□□ -1.13
HMGB3P5-201ENST00000428894 CASP7P55210 303 aa8□□□□□ -1.13
HMGB3P5-201ENST00000428894 YBX1P67809 324 aaKnown RBP8□□□□□ -1.13
HMGB3P5-201ENST00000428894 SIAH1Q8IUQ4 282 aa8□□□□□ -1.13
HMGB3P5-201ENST00000428894 FAM169BQ8N8A8 192 aa8□□□□□ -1.13
HMGB3P5-201ENST00000428894 KLHL6Q8WZ60 621 aa8□□□□□ -1.13
HMGB3P5-201ENST00000428894 ANAPC16Q96DE5 110 aa8□□□□□ -1.13
HMGB3P5-201ENST00000428894 MBD1Q9UIS9 605 aaPredicted RBP8□□□□□ -1.13
HMGB3P5-201ENST00000428894 STRIP2Q9ULQ0 834 aa8□□□□□ -1.13
HMGB3P5-201ENST00000428894 ABLIM1O14639 778 aa7.99□□□□□ -1.13
HMGB3P5-201ENST00000428894 MVKQ03426 396 aa7.99□□□□□ -1.13
HMGB3P5-201ENST00000428894 RAB3GAP1Q15042 981 aa7.99□□□□□ -1.13
HMGB3P5-201ENST00000428894 OLFML2BQ68BL8 750 aa7.99□□□□□ -1.13
HMGB3P5-201ENST00000428894 KIAA1211LQ6NV74 962 aa7.99□□□□□ -1.13
HMGB3P5-201ENST00000428894 CYP2R1Q6VVX0 501 aa7.99□□□□□ -1.13
HMGB3P5-201ENST00000428894 PTCHD1Q96NR3 888 aa7.99□□□□□ -1.13
HMGB3P5-201ENST00000428894 KLHL14Q9P2G3 628 aa7.99□□□□□ -1.13
HMGB3P5-201ENST00000428894 CNOT6Q9ULM6 557 aaKnown RBP7.99□□□□□ -1.13
HMGB3P5-201ENST00000428894 NUDT19A8MXV4 375 aa7.98□□□□□ -1.13
HMGB3P5-201ENST00000428894 VAMP4O75379 141 aa7.98□□□□□ -1.13
HMGB3P5-201ENST00000428894 ATF4P18848 351 aaPredicted RBP7.98□□□□□ -1.13
HMGB3P5-201ENST00000428894 ERCC5P28715 1186 aaPredicted RBP7.98□□□□□ -1.13
HMGB3P5-201ENST00000428894 VHLLQ6RSH7 139 aa7.98□□□□□ -1.13
HMGB3P5-201ENST00000428894 IRF2BPLQ9H1B7 796 aa7.98□□□□□ -1.13
HMGB3P5-201ENST00000428894 CNTD2Q9H8S5 307 aa7.98□□□□□ -1.13
HMGB3P5-201ENST00000428894 TNFRSF12AQ9NP84 129 aa7.98□□□□□ -1.13
HMGB3P5-201ENST00000428894 TBC1D8O95759 1140 aa7.97□□□□□ -1.13
HMGB3P5-201ENST00000428894 MSL3P1P0C860 447 aa7.97□□□□□ -1.13
HMGB3P5-201ENST00000428894 DPY19L1Q2PZI1 675 aa7.97□□□□□ -1.13
HMGB3P5-201ENST00000428894 AMIGO3Q86WK7 504 aa7.97□□□□□ -1.13
HMGB3P5-201ENST00000428894 MCMBPQ9BTE3 642 aa7.97□□□□□ -1.13
HMGB3P5-201ENST00000428894 CAPN10Q9HC96 672 aa7.97□□□□□ -1.13
HMGB3P5-201ENST00000428894 SUGT1Q9Y2Z0 365 aa7.97□□□□□ -1.13
HMGB3P5-201ENST00000428894 KCTD3Q9Y597 815 aa7.97□□□□□ -1.13
HMGB3P5-201ENST00000428894 ATAD2BQ9ULI0 1458 aa7.97□□□□□ -1.13
HMGB3P5-201ENST00000428894 SMARCA2P51531 1590 aa7.97□□□□□ -1.13
HMGB3P5-201ENST00000428894 TMEM62Q0P6H9 643 aa7.96□□□□□ -1.14
HMGB3P5-201ENST00000428894 VPS37DQ86XT2 251 aa7.96□□□□□ -1.14
HMGB3P5-201ENST00000428894 ARHGEF39Q8N4T4 335 aa7.96□□□□□ -1.14
HMGB3P5-201ENST00000428894 CGGBP1Q9UFW8 167 aaPredicted RBP7.96□□□□□ -1.14
HMGB3P5-201ENST00000428894 SUSD2Q9UGT4 822 aa7.96□□□□□ -1.14
HMGB3P5-201ENST00000428894 NESP48681 1621 aa7.96□□□□□ -1.14
HMGB3P5-201ENST00000428894 HMGXB3Q12766 1538 aa7.95□□□□□ -1.14
HMGB3P5-201ENST00000428894 A0A1W2PQJ5 194 aa7.95□□□□□ -1.14
HMGB3P5-201ENST00000428894 STXBP3O00186 592 aa7.95□□□□□ -1.14
HMGB3P5-201ENST00000428894 AURKAO14965 403 aa7.95□□□□□ -1.14
HMGB3P5-201ENST00000428894 EPHB3P54753 998 aa7.95□□□□□ -1.14
HMGB3P5-201ENST00000428894 SSPNQ14714 243 aa7.95□□□□□ -1.14
HMGB3P5-201ENST00000428894 ZNF385BQ569K4 471 aa7.95□□□□□ -1.14
HMGB3P5-201ENST00000428894 RCSD1Q6JBY9 416 aa7.95□□□□□ -1.14
HMGB3P5-201ENST00000428894 TMC6Q7Z403 805 aa7.95□□□□□ -1.14
HMGB3P5-201ENST00000428894 RCC1LQ96I51 464 aaKnown RBP7.95□□□□□ -1.14
HMGB3P5-201ENST00000428894 ANKRD34BA5PLL1 514 aa7.94□□□□□ -1.14
HMGB3P5-201ENST00000428894 N4BP3O15049 544 aa7.94□□□□□ -1.14
HMGB3P5-201ENST00000428894 L1CAMP32004 1257 aa7.94□□□□□ -1.14
HMGB3P5-201ENST00000428894 CDR1P51861 262 aa7.94□□□□□ -1.14
HMGB3P5-201ENST00000428894 AMPD2Q01433 879 aa7.94□□□□□ -1.14
HMGB3P5-201ENST00000428894 CBX2Q14781 532 aaPredicted RBP7.94□□□□□ -1.14
HMGB3P5-201ENST00000428894 EEF1DP3Q658K8 133 aa7.94□□□□□ -1.14
HMGB3P5-201ENST00000428894 BICRALQ6AI39 1079 aa7.94□□□□□ -1.14
HMGB3P5-201ENST00000428894 RPTNQ6XPR3 784 aa7.94□□□□□ -1.14
HMGB3P5-201ENST00000428894 ZNF428Q96B54 188 aa7.94□□□□□ -1.14
HMGB3P5-201ENST00000428894 SIGLEC10Q96LC7 697 aa7.94□□□□□ -1.14
HMGB3P5-201ENST00000428894 APBA2Q99767 749 aa7.94□□□□□ -1.14
HMGB3P5-201ENST00000428894 PDLIM7Q9NR12 457 aa7.94□□□□□ -1.14
HMGB3P5-201ENST00000428894 IRAK3Q9Y616 596 aa7.94□□□□□ -1.14
HMGB3P5-201ENST00000428894 MRVI1Q9Y6F6 885 aa7.94□□□□□ -1.14
HMGB3P5-201ENST00000428894 THOC2Q8NI27 1593 aaKnown RBP7.93□□□□□ -1.14
HMGB3P5-201ENST00000428894 RFXAPO00287 272 aa7.93□□□□□ -1.14
HMGB3P5-201ENST00000428894 SSBP05455 408 aaKnown RBP eCLIP7.93□□□□□ -1.14
HMGB3P5-201ENST00000428894 TCF3P15923 654 aa7.93□□□□□ -1.14
HMGB3P5-201ENST00000428894 PI3P19957 117 aa7.93□□□□□ -1.14
HMGB3P5-201ENST00000428894 SEPHS1P49903 392 aa7.93□□□□□ -1.14
HMGB3P5-201ENST00000428894 GRB10Q13322 594 aa7.93□□□□□ -1.14
HMGB3P5-201ENST00000428894 NR1I3Q14994 352 aa7.93□□□□□ -1.14
HMGB3P5-201ENST00000428894 LDHDQ86WU2 507 aa7.93□□□□□ -1.14
HMGB3P5-201ENST00000428894 MZB1Q8WU39 189 aa7.93□□□□□ -1.14
HMGB3P5-201ENST00000428894 APEX2Q9UBZ4 518 aa7.93□□□□□ -1.14
HMGB3P5-201ENST00000428894 AKT3Q9Y243 479 aa7.93□□□□□ -1.14
HMGB3P5-201ENST00000428894 BACE2Q9Y5Z0 518 aa7.93□□□□□ -1.14
HMGB3P5-201ENST00000428894 LAMC3Q9Y6N6 1575 aa7.93□□□□□ -1.14
HMGB3P5-201ENST00000428894 C2orf71A6NGG8 1288 aa7.92□□□□□ -1.14
HMGB3P5-201ENST00000428894 SMAD7O15105 426 aaKnown RBP7.92□□□□□ -1.14
HMGB3P5-201ENST00000428894 TACR1P25103 407 aa7.92□□□□□ -1.14
HMGB3P5-201ENST00000428894 ZNF513Q8N8E2 541 aaPredicted RBP7.92□□□□□ -1.14
HMGB3P5-201ENST00000428894 NLGN2Q8NFZ4 835 aa7.92□□□□□ -1.14
HMGB3P5-201ENST00000428894 PANK1Q8TE04 598 aa7.92□□□□□ -1.14
HMGB3P5-201ENST00000428894 PDS5BQ9NTI5 1447 aa7.92□□□□□ -1.14
HMGB3P5-201ENST00000428894 DBHP09172 617 aa7.91□□□□□ -1.14
HMGB3P5-201ENST00000428894 MAPKAPK2P49137 400 aa7.91□□□□□ -1.14
HMGB3P5-201ENST00000428894 CORO7P57737 925 aa7.91□□□□□ -1.14
HMGB3P5-201ENST00000428894 GNL2Q13823 731 aaKnown RBP7.91□□□□□ -1.14
HMGB3P5-201ENST00000428894 NCAPHQ15003 741 aa7.91□□□□□ -1.14
HMGB3P5-201ENST00000428894 PLEKHN1Q494U1 663 aaPredicted RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms