RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 AGBL1Q96MI9 1066 aa27.82■■■□□ 2.04
APOE-202ENST00000425718 PCDHA1Q9Y5I3 950 aa27.82■■■□□ 2.04
APOE-202ENST00000425718 XBP1P17861 261 aa27.81■■■□□ 2.04
APOE-202ENST00000425718 ERCC3P19447 782 aa27.81■■■□□ 2.04
APOE-202ENST00000425718 SNAP25P60880 206 aa27.81■■■□□ 2.04
APOE-202ENST00000425718 PFKFB3Q16875 520 aaPredicted RBP27.81■■■□□ 2.04
APOE-202ENST00000425718 SLC35G1Q2M3R5 365 aa27.81■■■□□ 2.04
APOE-202ENST00000425718 PPP1R18Q6NYC8 613 aa27.81■■■□□ 2.04
APOE-202ENST00000425718 ABRAQ8N0Z2 381 aa27.81■■■□□ 2.04
APOE-202ENST00000425718 TRERF1Q96PN7 1200 aa27.81■■■□□ 2.04
APOE-202ENST00000425718 GLT8D2Q9H1C3 349 aa27.81■■■□□ 2.04
APOE-202ENST00000425718 RNF146Q9NTX7 359 aa27.81■■■□□ 2.04
APOE-202ENST00000425718 ZNF236Q9UL36 1845 aa27.81■■■□□ 2.04
APOE-202ENST00000425718 CASP8AP2Q9UKL3 1982 aa27.8■■■□□ 2.04
APOE-202ENST00000425718 CD2BP2O95400 341 aaKnown RBP27.8■■■□□ 2.04
APOE-202ENST00000425718 SCG2P13521 617 aa27.8■■■□□ 2.04
APOE-202ENST00000425718 BECN1Q14457 450 aa27.8■■■□□ 2.04
APOE-202ENST00000425718 USH1GQ495M9 461 aa27.8■■■□□ 2.04
APOE-202ENST00000425718 WDR78Q5VTH9 848 aa27.8■■■□□ 2.04
APOE-202ENST00000425718 PLEKHH3Q7Z736 793 aa27.8■■■□□ 2.04
APOE-202ENST00000425718 ZNF296Q8WUU4 475 aaPredicted RBP27.8■■■□□ 2.04
APOE-202ENST00000425718 PHKBQ93100 1093 aa27.8■■■□□ 2.04
APOE-202ENST00000425718 MAP3K20Q9NYL2 800 aaKnown RBP27.8■■■□□ 2.04
APOE-202ENST00000425718 PFASO15067 1338 aa27.79■■■□□ 2.04
APOE-202ENST00000425718 TNPO2O14787 897 aaKnown RBP27.79■■■□□ 2.04
APOE-202ENST00000425718 FCER1AP12319 257 aa27.79■■■□□ 2.04
APOE-202ENST00000425718 SLC4A3P48751 1232 aa27.79■■■□□ 2.04
APOE-202ENST00000425718 RGS22Q8NE09 1264 aa27.79■■■□□ 2.04
APOE-202ENST00000425718 CCDC148Q8NFR7 591 aa27.79■■■□□ 2.04
APOE-202ENST00000425718 SOCS4Q8WXH5 440 aa27.79■■■□□ 2.04
APOE-202ENST00000425718 PIBF1Q8WXW3 757 aa27.79■■■□□ 2.04
APOE-202ENST00000425718 SLC5A4Q9NY91 659 aa27.79■■■□□ 2.04
APOE-202ENST00000425718 HSPA8P11142 646 aaKnown RBP27.78■■■□□ 2.04
APOE-202ENST00000425718 PSMC4P43686 418 aa27.78■■■□□ 2.04
APOE-202ENST00000425718 PRMT2P55345 433 aa27.78■■■□□ 2.04
APOE-202ENST00000425718 KCTD2Q14681 263 aa27.78■■■□□ 2.04
APOE-202ENST00000425718 HEATR3Q7Z4Q2 680 aa27.78■■■□□ 2.04
APOE-202ENST00000425718 NSUN7Q8NE18 718 aaKnown RBP27.78■■■□□ 2.04
APOE-202ENST00000425718 PORCNQ9H237 461 aa27.78■■■□□ 2.04
APOE-202ENST00000425718 SH3GLB2Q9NR46 395 aa27.78■■■□□ 2.04
APOE-202ENST00000425718 ORC3Q9UBD5 711 aaPredicted RBP27.78■■■□□ 2.04
APOE-202ENST00000425718 SLC15A5A6NIM6 579 aa27.77■■■□□ 2.04
APOE-202ENST00000425718 FOXN1O15353 648 aa27.77■■■□□ 2.04
APOE-202ENST00000425718 GPR142Q7Z601 462 aa27.77■■■□□ 2.04
APOE-202ENST00000425718 MMP19Q99542 508 aa27.77■■■□□ 2.04
APOE-202ENST00000425718 EFCC1Q9HA90 598 aa27.77■■■□□ 2.04
APOE-202ENST00000425718 BARHL2Q9NY43 387 aa27.77■■■□□ 2.04
APOE-202ENST00000425718 PLXNA1Q9UIW2 1896 aa27.76■■■□□ 2.04
APOE-202ENST00000425718 PTPDC1A2A3K4 754 aa27.76■■■□□ 2.03
APOE-202ENST00000425718 INTS4Q96HW7 963 aaKnown RBP27.76■■■□□ 2.03
APOE-202ENST00000425718 HOMER2Q9NSB8 354 aa27.76■■■□□ 2.03
APOE-202ENST00000425718 TSKSQ9UJT2 592 aa27.76■■■□□ 2.03
APOE-202ENST00000425718 RIPK3Q9Y572 518 aa27.76■■■□□ 2.03
APOE-202ENST00000425718 PTPREP23469 700 aa27.75■■■□□ 2.03
APOE-202ENST00000425718 NAPAP54920 295 aa27.75■■■□□ 2.03
APOE-202ENST00000425718 CUL4AQ13619 759 aa27.75■■■□□ 2.03
APOE-202ENST00000425718 ANKRD35Q8N283 1001 aa27.75■■■□□ 2.03
APOE-202ENST00000425718 FAM184AQ8NB25 1140 aa27.75■■■□□ 2.03
APOE-202ENST00000425718 SMARCC2Q8TAQ2 1214 aa27.75■■■□□ 2.03
APOE-202ENST00000425718 CUL5Q93034 780 aa27.75■■■□□ 2.03
APOE-202ENST00000425718 NUDT12Q9BQG2 462 aa27.75■■■□□ 2.03
APOE-202ENST00000425718 PEX10O60683 326 aa27.74■■■□□ 2.03
APOE-202ENST00000425718 PPP1R11O60927 126 aaPredicted RBP27.74■■■□□ 2.03
APOE-202ENST00000425718 CTDNEP1O95476 244 aa27.74■■■□□ 2.03
APOE-202ENST00000425718 CD99L2Q8TCZ2 262 aa27.74■■■□□ 2.03
APOE-202ENST00000425718 DDX11Q96FC9 970 aa27.74■■■□□ 2.03
APOE-202ENST00000425718 ESYT2A0FGR8 921 aa27.73■■■□□ 2.03
APOE-202ENST00000425718 GNA11P29992 359 aa27.73■■■□□ 2.03
APOE-202ENST00000425718 ST3GAL1Q11201 340 aa27.73■■■□□ 2.03
APOE-202ENST00000425718 GRB14Q14449 540 aa27.73■■■□□ 2.03
APOE-202ENST00000425718 PKN1Q16512 942 aa27.73■■■□□ 2.03
APOE-202ENST00000425718 WWC2Q6AWC2 1192 aa27.73■■■□□ 2.03
APOE-202ENST00000425718 GALNT17Q6IS24 598 aa27.73■■■□□ 2.03
APOE-202ENST00000425718 BICD2Q8TD16 824 aa27.73■■■□□ 2.03
APOE-202ENST00000425718 SMC3Q9UQE7 1217 aa27.73■■■□□ 2.03
APOE-202ENST00000425718 hCG_1642624A0A1W2PR95 340 aa27.72■■■□□ 2.03
APOE-202ENST00000425718 HSP90AA1P07900 732 aaKnown RBP27.72■■■□□ 2.03
APOE-202ENST00000425718 MRPL12P52815 198 aaKnown RBP27.72■■■□□ 2.03
APOE-202ENST00000425718 GHRHRQ02643 423 aa27.72■■■□□ 2.03
APOE-202ENST00000425718 TRIM29Q14134 588 aa27.72■■■□□ 2.03
APOE-202ENST00000425718 MCTP2Q6DN12 878 aa27.72■■■□□ 2.03
APOE-202ENST00000425718 RNF207Q6ZRF8 634 aa27.72■■■□□ 2.03
APOE-202ENST00000425718 CLEC4DQ8WXI8 215 aa27.72■■■□□ 2.03
APOE-202ENST00000425718 TRIM47Q96LD4 638 aa27.72■■■□□ 2.03
APOE-202ENST00000425718 C6orf50Q9HD87 102 aa27.72■■■□□ 2.03
APOE-202ENST00000425718 STXBP3O00186 592 aa27.71■■■□□ 2.03
APOE-202ENST00000425718 CALML3P27482 149 aa27.71■■■□□ 2.03
APOE-202ENST00000425718 RGS2P41220 211 aa27.71■■■□□ 2.03
APOE-202ENST00000425718 LBX1P52954 281 aa27.71■■■□□ 2.03
APOE-202ENST00000425718 MUM1L1Q5H9M0 696 aa27.71■■■□□ 2.03
APOE-202ENST00000425718 NSMFQ6X4W1 530 aa27.71■■■□□ 2.03
APOE-202ENST00000425718 GPKOWQ92917 476 aaPredicted RBP eCLIP27.71■■■□□ 2.03
APOE-202ENST00000425718 MPHOSPH6Q99547 160 aaKnown RBP27.71■■■□□ 2.03
APOE-202ENST00000425718 PSTPIP2Q9H939 334 aa27.71■■■□□ 2.03
APOE-202ENST00000425718 PRDM10Q9NQV6 1147 aa27.71■■■□□ 2.03
APOE-202ENST00000425718 DIS3Q9Y2L1 958 aaKnown RBP27.71■■■□□ 2.03
APOE-202ENST00000425718 LOC102724159A0A0B4J2E5 919 aa27.7■■■□□ 2.02
APOE-202ENST00000425718 B4DLN1 442 aa27.7■■■□□ 2.02
APOE-202ENST00000425718 GCOM1H8Y6P7 765 aaPredicted RBP27.7■■■□□ 2.02
APOE-202ENST00000425718 POLR2MP0CAP2 368 aa27.7■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms