RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 hCG_1984214I3L0E3 225 aa16.71■□□□□ 0.27
SGCE-202ENST00000415788 CNMDO75829 334 aa16.71■□□□□ 0.27
SGCE-202ENST00000415788 BCRP11274 1271 aa16.71■□□□□ 0.27
SGCE-202ENST00000415788 STAT3P40763 770 aa16.71■□□□□ 0.27
SGCE-202ENST00000415788 ERVK-9P63128 1117 aa16.71■□□□□ 0.27
SGCE-202ENST00000415788 ERVK-24P63145 666 aa16.71■□□□□ 0.27
SGCE-202ENST00000415788 CCDC174Q6PII3 467 aa16.71■□□□□ 0.27
SGCE-202ENST00000415788 POTEEQ6S8J3 1075 aa16.71■□□□□ 0.27
SGCE-202ENST00000415788 ZNF713Q8N859 430 aaPredicted RBP16.71■□□□□ 0.27
SGCE-202ENST00000415788 RAVER2Q9HCJ3 691 aaKnown RBP16.71■□□□□ 0.27
SGCE-202ENST00000415788 TXNRD2Q9NNW7 524 aa16.71■□□□□ 0.27
SGCE-202ENST00000415788 CPA4Q9UI42 421 aa16.71■□□□□ 0.27
SGCE-202ENST00000415788 A0A0G2JMZ2 1700 aa16.71■□□□□ 0.27
SGCE-202ENST00000415788 ZNF536O15090 1300 aa16.71■□□□□ 0.26
SGCE-202ENST00000415788 PARP14Q460N5 1801 aa16.7■□□□□ 0.26
SGCE-202ENST00000415788 SLC25A27O95847 323 aa16.7■□□□□ 0.26
SGCE-202ENST00000415788 NCLP19338 710 aaKnown RBP16.7■□□□□ 0.26
SGCE-202ENST00000415788 HMGN5P82970 282 aaKnown RBP16.7■□□□□ 0.26
SGCE-202ENST00000415788 CUL4AQ13619 759 aa16.7■□□□□ 0.26
SGCE-202ENST00000415788 TKFCQ3LXA3 575 aa16.7■□□□□ 0.26
SGCE-202ENST00000415788 NOM1Q5C9Z4 860 aaKnown RBP16.7■□□□□ 0.26
SGCE-202ENST00000415788 FBXO11Q86XK2 927 aa16.7■□□□□ 0.26
SGCE-202ENST00000415788 RIOX2Q8IUF8 465 aa16.7■□□□□ 0.26
SGCE-202ENST00000415788 CPXCR1Q8N123 301 aa16.7■□□□□ 0.26
SGCE-202ENST00000415788 NSUN7Q8NE18 718 aaKnown RBP16.7■□□□□ 0.26
SGCE-202ENST00000415788 PHKBQ93100 1093 aa16.7■□□□□ 0.26
SGCE-202ENST00000415788 SLC26A6Q9BXS9 759 aa16.7■□□□□ 0.26
SGCE-202ENST00000415788 RBSNQ9H1K0 784 aa16.7■□□□□ 0.26
SGCE-202ENST00000415788 CCPG1Q9ULG6 757 aa16.7■□□□□ 0.26
SGCE-202ENST00000415788 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.7■□□□□ 0.26
SGCE-202ENST00000415788 PTPDC1A2A3K4 754 aa16.69■□□□□ 0.26
SGCE-202ENST00000415788 DEXIO95424 95 aa16.69■□□□□ 0.26
SGCE-202ENST00000415788 CTDNEP1O95476 244 aa16.69■□□□□ 0.26
SGCE-202ENST00000415788 TBC1D8O95759 1140 aa16.69■□□□□ 0.26
SGCE-202ENST00000415788 MBD3O95983 291 aa16.69■□□□□ 0.26
SGCE-202ENST00000415788 SNAP25P60880 206 aa16.69■□□□□ 0.26
SGCE-202ENST00000415788 PLS1Q14651 629 aa16.69■□□□□ 0.26
SGCE-202ENST00000415788 LRSAM1Q6UWE0 723 aa16.69■□□□□ 0.26
SGCE-202ENST00000415788 SHCBP1Q8NEM2 672 aa16.69■□□□□ 0.26
SGCE-202ENST00000415788 WASF1Q92558 559 aa16.69■□□□□ 0.26
SGCE-202ENST00000415788 CCDC39Q9UFE4 941 aa16.69■□□□□ 0.26
SGCE-202ENST00000415788 ZKSCAN5Q9Y2L8 839 aa16.69■□□□□ 0.26
SGCE-202ENST00000415788 PFKFB3Q16875 520 aaPredicted RBP16.69■□□□□ 0.26
SGCE-202ENST00000415788 SNRNP48Q6IEG0 339 aaKnown RBP16.69■□□□□ 0.26
SGCE-202ENST00000415788 SMARCC2Q8TAQ2 1214 aa16.69■□□□□ 0.26
SGCE-202ENST00000415788 PIBF1Q8WXW3 757 aa16.69■□□□□ 0.26
SGCE-202ENST00000415788 INTS4Q96HW7 963 aaKnown RBP16.69■□□□□ 0.26
SGCE-202ENST00000415788 SCG2P13521 617 aa16.68■□□□□ 0.26
SGCE-202ENST00000415788 CHST13Q8NET6 341 aa16.68■□□□□ 0.26
SGCE-202ENST00000415788 AGBL1Q96MI9 1066 aa16.68■□□□□ 0.26
SGCE-202ENST00000415788 MOV10L1Q9BXT6 1211 aaKnown RBP16.68■□□□□ 0.26
SGCE-202ENST00000415788 ORC3Q9UBD5 711 aaPredicted RBP16.68■□□□□ 0.26
SGCE-202ENST00000415788 FBXO40Q9UH90 709 aa16.68■□□□□ 0.26
SGCE-202ENST00000415788 PCDHA1Q9Y5I3 950 aa16.68■□□□□ 0.26
SGCE-202ENST00000415788 ABCB11O95342 1321 aa16.68■□□□□ 0.26
SGCE-202ENST00000415788 Q3C1V9 767 aa16.67■□□□□ 0.26
SGCE-202ENST00000415788 CCAR1Q8IX12 1150 aaKnown RBP16.67■□□□□ 0.26
SGCE-202ENST00000415788 FAM177A1Q8N128 213 aaPredicted RBP16.67■□□□□ 0.26
SGCE-202ENST00000415788 MAF1Q9H063 256 aa16.67■□□□□ 0.26
SGCE-202ENST00000415788 MROH8Q9H579 483 aa16.67■□□□□ 0.26
SGCE-202ENST00000415788 MRPL11Q9Y3B7 192 aaKnown RBP16.67■□□□□ 0.26
SGCE-202ENST00000415788 KIF3AQ9Y496 699 aa16.67■□□□□ 0.26
SGCE-202ENST00000415788 hCG_1642624A0A1W2PR95 340 aa16.67■□□□□ 0.26
SGCE-202ENST00000415788 PPP1R11O60927 126 aaPredicted RBP16.67■□□□□ 0.26
SGCE-202ENST00000415788 MAPK4P31152 587 aa16.67■□□□□ 0.26
SGCE-202ENST00000415788 PKN1Q16512 942 aa16.67■□□□□ 0.26
SGCE-202ENST00000415788 HEATR3Q7Z4Q2 680 aa16.67■□□□□ 0.26
SGCE-202ENST00000415788 R3HDMLQ9H3Y0 253 aa16.67■□□□□ 0.26
SGCE-202ENST00000415788 DYNC1I1O14576 645 aa16.66■□□□□ 0.26
SGCE-202ENST00000415788 JAK2O60674 1132 aa16.66■□□□□ 0.26
SGCE-202ENST00000415788 ALAS1P13196 640 aa16.66■□□□□ 0.26
SGCE-202ENST00000415788 XBP1P17861 261 aa16.66■□□□□ 0.26
SGCE-202ENST00000415788 ERCC3P19447 782 aa16.66■□□□□ 0.26
SGCE-202ENST00000415788 SP3Q02447 781 aa16.66■□□□□ 0.26
SGCE-202ENST00000415788 USH1GQ495M9 461 aa16.66■□□□□ 0.26
SGCE-202ENST00000415788 PPP1R18Q6NYC8 613 aa16.66■□□□□ 0.26
SGCE-202ENST00000415788 NCAPG2Q86XI2 1143 aa16.66■□□□□ 0.26
SGCE-202ENST00000415788 TEX2Q8IWB9 1127 aa16.66■□□□□ 0.26
SGCE-202ENST00000415788 CCDC12Q8WUD4 166 aaPredicted RBP16.66■□□□□ 0.26
SGCE-202ENST00000415788 TRERF1Q96PN7 1200 aa16.66■□□□□ 0.26
SGCE-202ENST00000415788 BARHL2Q9NY43 387 aa16.66■□□□□ 0.26
SGCE-202ENST00000415788 R3HCC1Q9Y3T6 440 aaKnown RBP16.66■□□□□ 0.26
SGCE-202ENST00000415788 GPR25O00155 361 aa16.65■□□□□ 0.26
SGCE-202ENST00000415788 PEX10O60683 326 aa16.65■□□□□ 0.26
SGCE-202ENST00000415788 PPFIA3O75145 1194 aa16.65■□□□□ 0.26
SGCE-202ENST00000415788 PRPF40AO75400 957 aaKnown RBP16.65■□□□□ 0.26
SGCE-202ENST00000415788 WWC2Q6AWC2 1192 aa16.65■□□□□ 0.26
SGCE-202ENST00000415788 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.65■□□□□ 0.26
SGCE-202ENST00000415788 GPT2Q8TD30 523 aa16.65■□□□□ 0.26
SGCE-202ENST00000415788 ACAD9Q9H845 621 aa16.65■□□□□ 0.26
SGCE-202ENST00000415788 SH3GLB2Q9NR46 395 aa16.65■□□□□ 0.26
SGCE-202ENST00000415788 RNF146Q9NTX7 359 aa16.65■□□□□ 0.26
SGCE-202ENST00000415788 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.65■□□□□ 0.26
SGCE-202ENST00000415788 SMC3Q9UQE7 1217 aa16.65■□□□□ 0.26
SGCE-202ENST00000415788 FDPSP14324 419 aaKnown RBP16.65■□□□□ 0.26
SGCE-202ENST00000415788 MCF2L2Q86YR7 1114 aa16.65■□□□□ 0.26
SGCE-202ENST00000415788 SAMD3Q8N6K7 520 aa16.65■□□□□ 0.26
SGCE-202ENST00000415788 FAM184AQ8NB25 1140 aa16.65■□□□□ 0.26
SGCE-202ENST00000415788 CCDC148Q8NFR7 591 aa16.65■□□□□ 0.26
SGCE-202ENST00000415788 DDX11Q96FC9 970 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms