RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 PNPLA7Q6ZV29 1317 aa18.57■□□□□ 0.56
PCDHA13-202ENST00000409494 ATP2A2P16615 1042 aaKnown RBP18.57■□□□□ 0.56
PCDHA13-202ENST00000409494 ATF7P17544 494 aaPredicted RBP18.57■□□□□ 0.56
PCDHA13-202ENST00000409494 LRCH2Q5VUJ6 765 aa18.57■□□□□ 0.56
PCDHA13-202ENST00000409494 AP5M1Q9H0R1 490 aa18.57■□□□□ 0.56
PCDHA13-202ENST00000409494 HAUS2Q9NVX0 235 aa18.57■□□□□ 0.56
PCDHA13-202ENST00000409494 MTRF1LQ9UGC7 380 aaKnown RBP18.57■□□□□ 0.56
PCDHA13-202ENST00000409494 TSKSQ9UJT2 592 aa18.57■□□□□ 0.56
PCDHA13-202ENST00000409494 ARHGAP6O43182 974 aa18.57■□□□□ 0.56
PCDHA13-202ENST00000409494 XRCC5P13010 732 aaKnown RBP18.57■□□□□ 0.56
PCDHA13-202ENST00000409494 ADCK5Q3MIX3 580 aa18.57■□□□□ 0.56
PCDHA13-202ENST00000409494 CCDC14Q49A88 953 aa18.57■□□□□ 0.56
PCDHA13-202ENST00000409494 SLIT1O75093 1534 aa18.57■□□□□ 0.56
PCDHA13-202ENST00000409494 PRKAB2O43741 272 aa18.57■□□□□ 0.56
PCDHA13-202ENST00000409494 MMP14P50281 582 aa18.57■□□□□ 0.56
PCDHA13-202ENST00000409494 C2orf69Q8N8R5 385 aa18.57■□□□□ 0.56
PCDHA13-202ENST00000409494 GPKOWQ92917 476 aaPredicted RBP eCLIP18.57■□□□□ 0.56
PCDHA13-202ENST00000409494 HOXC10Q9NYD6 342 aa18.57■□□□□ 0.56
PCDHA13-202ENST00000409494 LPXNO60711 386 aa18.56■□□□□ 0.56
PCDHA13-202ENST00000409494 CAMTA2O94983 1202 aa18.56■□□□□ 0.56
PCDHA13-202ENST00000409494 CCND2P30279 289 aa18.56■□□□□ 0.56
PCDHA13-202ENST00000409494 FAM26FQ5R3K3 315 aa18.56■□□□□ 0.56
PCDHA13-202ENST00000409494 ARL6IP4Q66PJ3 421 aaKnown RBP18.56■□□□□ 0.56
PCDHA13-202ENST00000409494 MICALCLQ6ZW33 695 aa18.56■□□□□ 0.56
PCDHA13-202ENST00000409494 NACC1Q96RE7 527 aa18.56■□□□□ 0.56
PCDHA13-202ENST00000409494 STK36Q9NRP7 1315 aa18.56■□□□□ 0.56
PCDHA13-202ENST00000409494 TMEM131LA2VDJ0 1609 aa18.56■□□□□ 0.56
PCDHA13-202ENST00000409494 CYP2E1P05181 493 aaPredicted RBP18.56■□□□□ 0.56
PCDHA13-202ENST00000409494 CSF1RP07333 972 aa18.56■□□□□ 0.56
PCDHA13-202ENST00000409494 PLCB3Q01970 1234 aa18.56■□□□□ 0.56
PCDHA13-202ENST00000409494 DMP1Q13316 513 aaPredicted RBP18.56■□□□□ 0.56
PCDHA13-202ENST00000409494 RCSD1Q6JBY9 416 aa18.56■□□□□ 0.56
PCDHA13-202ENST00000409494 PI16Q6UXB8 463 aa18.56■□□□□ 0.56
PCDHA13-202ENST00000409494 CCDC125Q86Z20 511 aa18.56■□□□□ 0.56
PCDHA13-202ENST00000409494 GUCA1BQ9UMX6 200 aa18.56■□□□□ 0.56
PCDHA13-202ENST00000409494 RIPOR2Q9Y4F9 1068 aa18.56■□□□□ 0.56
PCDHA13-202ENST00000409494 UTYO14607 1347 aa18.56■□□□□ 0.56
PCDHA13-202ENST00000409494 MMP1P03956 469 aa18.56■□□□□ 0.56
PCDHA13-202ENST00000409494 ZNF569Q5MCW4 686 aa18.56■□□□□ 0.56
PCDHA13-202ENST00000409494 MAK16Q9BXY0 300 aaKnown RBP18.56■□□□□ 0.56
PCDHA13-202ENST00000409494 ARMCX3Q9UH62 379 aaPredicted RBP18.56■□□□□ 0.56
PCDHA13-202ENST00000409494 SYCE1Q8N0S2 351 aa18.56■□□□□ 0.56
PCDHA13-202ENST00000409494 RETREG2Q8NC44 543 aa18.56■□□□□ 0.56
PCDHA13-202ENST00000409494 CCDC26Q8TAB7 109 aa18.56■□□□□ 0.56
PCDHA13-202ENST00000409494 LIG4P49917 911 aa18.55■□□□□ 0.56
PCDHA13-202ENST00000409494 UBL4BQ8N7F7 174 aa18.55■□□□□ 0.56
PCDHA13-202ENST00000409494 GINS2Q9Y248 185 aa18.55■□□□□ 0.56
PCDHA13-202ENST00000409494 PHLPP2Q6ZVD8 1323 aa18.55■□□□□ 0.56
PCDHA13-202ENST00000409494 IQGAP1P46940 1657 aa18.55■□□□□ 0.56
PCDHA13-202ENST00000409494 PRPF6O94906 941 aaKnown RBP18.55■□□□□ 0.56
PCDHA13-202ENST00000409494 EVCP57679 992 aa18.55■□□□□ 0.56
PCDHA13-202ENST00000409494 MIS18BP1Q6P0N0 1132 aa18.55■□□□□ 0.56
PCDHA13-202ENST00000409494 MAIP1Q8WWC4 291 aa18.55■□□□□ 0.56
PCDHA13-202ENST00000409494 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.55■□□□□ 0.56
PCDHA13-202ENST00000409494 PANK4Q9NVE7 773 aa18.55■□□□□ 0.56
PCDHA13-202ENST00000409494 STYK1Q6J9G0 422 aa18.55■□□□□ 0.56
PCDHA13-202ENST00000409494 CCDC50Q8IVM0 306 aa18.55■□□□□ 0.56
PCDHA13-202ENST00000409494 RGS22Q8NE09 1264 aa18.55■□□□□ 0.56
PCDHA13-202ENST00000409494 GABPB2Q8TAK5 448 aaPredicted RBP18.55■□□□□ 0.56
PCDHA13-202ENST00000409494 COMMD10Q9Y6G5 202 aa18.55■□□□□ 0.56
PCDHA13-202ENST00000409494 YARSP54577 528 aaKnown RBP18.54■□□□□ 0.56
PCDHA13-202ENST00000409494 ALCAMQ13740 583 aa18.54■□□□□ 0.56
PCDHA13-202ENST00000409494 STRIP1Q5VSL9 837 aa18.54■□□□□ 0.56
PCDHA13-202ENST00000409494 DPH6Q7L8W6 267 aa18.54■□□□□ 0.56
PCDHA13-202ENST00000409494 GSTA5Q7RTV2 222 aa18.54■□□□□ 0.56
PCDHA13-202ENST00000409494 FEM1BQ9UK73 627 aa18.54■□□□□ 0.56
PCDHA13-202ENST00000409494 PCDHA7Q9UN72 937 aa18.54■□□□□ 0.56
PCDHA13-202ENST00000409494 FER1L4A9Z1Z3 1794 aa18.54■□□□□ 0.56
PCDHA13-202ENST00000409494 OPA1O60313 960 aa18.54■□□□□ 0.56
PCDHA13-202ENST00000409494 FAM102BQ5T8I3 360 aa18.54■□□□□ 0.56
PCDHA13-202ENST00000409494 ZNF354CQ86Y25 554 aa18.54■□□□□ 0.56
PCDHA13-202ENST00000409494 SLC7A3Q8WY07 619 aa18.54■□□□□ 0.56
PCDHA13-202ENST00000409494 ZNF577Q9BSK1 485 aa18.54■□□□□ 0.56
PCDHA13-202ENST00000409494 USP17L5A8MUK1 530 aa18.54■□□□□ 0.56
PCDHA13-202ENST00000409494 STAMBPO95630 424 aa18.54■□□□□ 0.56
PCDHA13-202ENST00000409494 TNNC2P02585 160 aa18.54■□□□□ 0.56
PCDHA13-202ENST00000409494 ERCC5P28715 1186 aaPredicted RBP18.54■□□□□ 0.56
PCDHA13-202ENST00000409494 KRT9P35527 623 aa18.54■□□□□ 0.56
PCDHA13-202ENST00000409494 POLGP54098 1239 aaPredicted RBP18.54■□□□□ 0.56
PCDHA13-202ENST00000409494 MAATS1Q7Z4T9 603 aa18.54■□□□□ 0.56
PCDHA13-202ENST00000409494 RIC8AQ9NPQ8 531 aa18.54■□□□□ 0.56
PCDHA13-202ENST00000409494 ITSN1Q15811 1721 aa18.54■□□□□ 0.56
PCDHA13-202ENST00000409494 PALM3A6NDB9 673 aaPredicted RBP18.54■□□□□ 0.56
PCDHA13-202ENST00000409494 GDF11O95390 407 aa18.54■□□□□ 0.56
PCDHA13-202ENST00000409494 VAV2P52735 878 aa18.54■□□□□ 0.56
PCDHA13-202ENST00000409494 SFMBT2Q5VUG0 894 aa18.54■□□□□ 0.56
PCDHA13-202ENST00000409494 U2AF2P26368 475 aaKnown RBP eCLIP18.53■□□□□ 0.56
PCDHA13-202ENST00000409494 CALCOCO2Q13137 446 aa18.53■□□□□ 0.56
PCDHA13-202ENST00000409494 GIMAP8Q8ND71 665 aaPredicted RBP18.53■□□□□ 0.56
PCDHA13-202ENST00000409494 RCOR1Q9UKL0 485 aa18.53■□□□□ 0.56
PCDHA13-202ENST00000409494 ZNRF3Q9ULT6 936 aa18.53■□□□□ 0.56
PCDHA13-202ENST00000409494 MST1RQ04912 1400 aa18.53■□□□□ 0.56
PCDHA13-202ENST00000409494 USP42Q9H9J4 1324 aaKnown RBP18.53■□□□□ 0.56
PCDHA13-202ENST00000409494 SPOPO43791 374 aa18.53■□□□□ 0.56
PCDHA13-202ENST00000409494 ORC4O43929 436 aa18.53■□□□□ 0.56
PCDHA13-202ENST00000409494 PPP1R2P3Q6NXS1 205 aa18.53■□□□□ 0.56
PCDHA13-202ENST00000409494 GRIN3BO60391 1043 aa18.53■□□□□ 0.56
PCDHA13-202ENST00000409494 GAS8O95995 478 aa18.53■□□□□ 0.56
PCDHA13-202ENST00000409494 IVLP07476 585 aa18.53■□□□□ 0.56
PCDHA13-202ENST00000409494 TNNI1P19237 187 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms