RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 USP17L20D6RJB6 530 aa15.66■□□□□ 0.1
SCAF4-202ENST00000399804 ZBTB5O15062 677 aa15.66■□□□□ 0.1
SCAF4-202ENST00000399804 USP17L24Q0WX57 530 aa15.66■□□□□ 0.1
SCAF4-202ENST00000399804 USP17L6PQ6QN14 398 aa15.66■□□□□ 0.1
SCAF4-202ENST00000399804 TMCO3Q6UWJ1 677 aa15.66■□□□□ 0.1
SCAF4-202ENST00000399804 HHIPL2Q6UWX4 724 aa15.66■□□□□ 0.1
SCAF4-202ENST00000399804 GPIHBP1Q8IV16 184 aa15.66■□□□□ 0.1
SCAF4-202ENST00000399804 PLCG1P19174 1290 aa15.65■□□□□ 0.1
SCAF4-202ENST00000399804 SEC23AQ15436 765 aa15.65■□□□□ 0.1
SCAF4-202ENST00000399804 NTRK3Q16288 839 aa15.65■□□□□ 0.1
SCAF4-202ENST00000399804 TTBK2Q6IQ55 1244 aa15.65■□□□□ 0.1
SCAF4-202ENST00000399804 ZNF771Q7L3S4 317 aaPredicted RBP15.65■□□□□ 0.1
SCAF4-202ENST00000399804 PLA2G4DQ86XP0 818 aa15.65■□□□□ 0.1
SCAF4-202ENST00000399804 SLFN12Q8IYM2 578 aa15.65■□□□□ 0.1
SCAF4-202ENST00000399804 TMEM260Q9NX78 707 aa15.65■□□□□ 0.1
SCAF4-202ENST00000399804 KDM3AQ9Y4C1 1321 aa15.65■□□□□ 0.1
SCAF4-202ENST00000399804 ECM2O94769 699 aaPredicted RBP15.65■□□□□ 0.1
SCAF4-202ENST00000399804 IQCEQ6IPM2 695 aa15.65■□□□□ 0.1
SCAF4-202ENST00000399804 FBXL16Q8N461 479 aa15.65■□□□□ 0.1
SCAF4-202ENST00000399804 LARP4BQ92615 738 aaKnown RBP15.65■□□□□ 0.1
SCAF4-202ENST00000399804 PDLIM2Q96JY6 352 aa15.65■□□□□ 0.1
SCAF4-202ENST00000399804 HOXA13P31271 388 aaPredicted RBP15.65■□□□□ 0.1
SCAF4-202ENST00000399804 KRT83P78385 493 aa15.65■□□□□ 0.1
SCAF4-202ENST00000399804 ZNF569Q5MCW4 686 aa15.65■□□□□ 0.1
SCAF4-202ENST00000399804 USP49Q70CQ1 688 aa15.65■□□□□ 0.1
SCAF4-202ENST00000399804 MYO3BQ8WXR4 1341 aa15.64■□□□□ 0.1
SCAF4-202ENST00000399804 GCFC2P16383 781 aaKnown RBP15.64■□□□□ 0.09
SCAF4-202ENST00000399804 KIF5AQ12840 1032 aa15.64■□□□□ 0.09
SCAF4-202ENST00000399804 MYCT1Q8N699 235 aa15.64■□□□□ 0.09
SCAF4-202ENST00000399804 ENOX1Q8TC92 643 aaKnown RBP15.64■□□□□ 0.09
SCAF4-202ENST00000399804 FBXO2Q9UK22 296 aaPredicted RBP15.64■□□□□ 0.09
SCAF4-202ENST00000399804 VIRMAQ69YN4 1812 aaKnown RBP15.64■□□□□ 0.09
SCAF4-202ENST00000399804 SLU7O95391 586 aaKnown RBP15.64■□□□□ 0.09
SCAF4-202ENST00000399804 ALS2CR12Q96Q35 445 aa15.64■□□□□ 0.09
SCAF4-202ENST00000399804 RTFDC1Q9BY42 306 aaPredicted RBP15.64■□□□□ 0.09
SCAF4-202ENST00000399804 ZNF408Q9H9D4 720 aa15.64■□□□□ 0.09
SCAF4-202ENST00000399804 DISC1Q9NRI5 854 aa15.64■□□□□ 0.09
SCAF4-202ENST00000399804 ABCC6O95255 1503 aa15.64■□□□□ 0.09
SCAF4-202ENST00000399804 PAFAH1B1P43034 410 aa15.64■□□□□ 0.09
SCAF4-202ENST00000399804 ADGRF4Q8IZF3 695 aa15.64■□□□□ 0.09
SCAF4-202ENST00000399804 MPHOSPH6Q99547 160 aaKnown RBP15.64■□□□□ 0.09
SCAF4-202ENST00000399804 MRPL44Q9H9J2 332 aaKnown RBP15.64■□□□□ 0.09
SCAF4-202ENST00000399804 FAM208AQ9UK61 1670 aaKnown RBP15.63■□□□□ 0.09
SCAF4-202ENST00000399804 PP2D1A8MPX8 630 aa15.63■□□□□ 0.09
SCAF4-202ENST00000399804 TUBB4AP04350 444 aa15.63■□□□□ 0.09
SCAF4-202ENST00000399804 AXDND1Q5T1B0 1012 aaPredicted RBP15.63■□□□□ 0.09
SCAF4-202ENST00000399804 MYOCDQ8IZQ8 938 aa15.63■□□□□ 0.09
SCAF4-202ENST00000399804 CUEDC2Q9H467 287 aa15.63■□□□□ 0.09
SCAF4-202ENST00000399804 KRT86O43790 486 aa15.63■□□□□ 0.09
SCAF4-202ENST00000399804 GCNT3O95395 438 aa15.63■□□□□ 0.09
SCAF4-202ENST00000399804 TRIM14Q14142 442 aa15.63■□□□□ 0.09
SCAF4-202ENST00000399804 SPZ1Q9BXG8 430 aa15.63■□□□□ 0.09
SCAF4-202ENST00000399804 CNTNAP5Q8WYK1 1306 aa15.63■□□□□ 0.09
SCAF4-202ENST00000399804 ASNSP08243 561 aa15.63■□□□□ 0.09
SCAF4-202ENST00000399804 GOLGA8FQ08AF8 430 aa15.63■□□□□ 0.09
SCAF4-202ENST00000399804 GOLGA8DPQ0D2H9 430 aa15.63■□□□□ 0.09
SCAF4-202ENST00000399804 NFIAQ12857 509 aa15.63■□□□□ 0.09
SCAF4-202ENST00000399804 MCM6Q14566 821 aa15.63■□□□□ 0.09
SCAF4-202ENST00000399804 FAM26FQ5R3K3 315 aa15.63■□□□□ 0.09
SCAF4-202ENST00000399804 EHBP1Q8NDI1 1231 aa15.63■□□□□ 0.09
SCAF4-202ENST00000399804 NBPF3Q9H094 633 aa15.63■□□□□ 0.09
SCAF4-202ENST00000399804 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.63■□□□□ 0.09
SCAF4-202ENST00000399804 TESPA1A2RU30 521 aaPredicted RBP15.62■□□□□ 0.09
SCAF4-202ENST00000399804 PRR29P0C7W0 189 aa15.62■□□□□ 0.09
SCAF4-202ENST00000399804 PABPC4Q13310 644 aaKnown RBP eCLIP15.62■□□□□ 0.096e-9■■■■■ 32.7
SCAF4-202ENST00000399804 QRICH1Q2TAL8 776 aa15.62■□□□□ 0.09
SCAF4-202ENST00000399804 TBC1D10BQ4KMP7 808 aaPredicted RBP15.62■□□□□ 0.09
SCAF4-202ENST00000399804 STYK1Q6J9G0 422 aa15.62■□□□□ 0.09
SCAF4-202ENST00000399804 ANO3Q9BYT9 981 aa15.62■□□□□ 0.09
SCAF4-202ENST00000399804 AS3MTQ9HBK9 375 aa15.62■□□□□ 0.09
SCAF4-202ENST00000399804 RNF216Q9NWF9 866 aaPredicted RBP15.62■□□□□ 0.09
SCAF4-202ENST00000399804 RIOK3O14730 519 aaKnown RBP15.62■□□□□ 0.09
SCAF4-202ENST00000399804 ATP2C1P98194 919 aaPredicted RBP15.62■□□□□ 0.09
SCAF4-202ENST00000399804 CUL4BQ13620 913 aa15.62■□□□□ 0.09
SCAF4-202ENST00000399804 TCHPQ9BT92 498 aa15.62■□□□□ 0.09
SCAF4-202ENST00000399804 FAM207AQ9NSI2 230 aaPredicted RBP15.62■□□□□ 0.09
SCAF4-202ENST00000399804 PANK4Q9NVE7 773 aa15.62■□□□□ 0.09
SCAF4-202ENST00000399804 STK24Q9Y6E0 443 aa15.62■□□□□ 0.09
SCAF4-202ENST00000399804 IL1R1P14778 569 aa15.62■□□□□ 0.09
SCAF4-202ENST00000399804 GRIK5Q16478 980 aa15.62■□□□□ 0.09
SCAF4-202ENST00000399804 DCAF4Q8WV16 495 aa15.62■□□□□ 0.09
SCAF4-202ENST00000399804 SPDYE4A6NLX3 237 aa15.62■□□□□ 0.09
SCAF4-202ENST00000399804 CCDC169A6NNP5 214 aa15.62■□□□□ 0.09
SCAF4-202ENST00000399804 TMCO5BA8MYB1 307 aa15.62■□□□□ 0.09
SCAF4-202ENST00000399804 HOXA10P31260 410 aaPredicted RBP15.62■□□□□ 0.09
SCAF4-202ENST00000399804 ZNF658Q5TYW1 1059 aaPredicted RBP15.62■□□□□ 0.09
SCAF4-202ENST00000399804 RCSD1Q6JBY9 416 aa15.62■□□□□ 0.09
SCAF4-202ENST00000399804 ZNF341Q9BYN7 854 aa15.62■□□□□ 0.09
SCAF4-202ENST00000399804 MAGEF1Q9HAY2 307 aa15.62■□□□□ 0.09
SCAF4-202ENST00000399804 CTAGE9A4FU28 777 aa15.61■□□□□ 0.09
SCAF4-202ENST00000399804 EPB41P11171 864 aaKnown RBP15.61■□□□□ 0.09
SCAF4-202ENST00000399804 GRIN1Q05586 938 aa15.61■□□□□ 0.09
SCAF4-202ENST00000399804 ARID5BQ14865 1188 aa15.61■□□□□ 0.09
SCAF4-202ENST00000399804 GRIPAP1Q4V328 841 aa15.61■□□□□ 0.09
SCAF4-202ENST00000399804 CCDC122Q5T0U0 273 aa15.61■□□□□ 0.09
SCAF4-202ENST00000399804 TMTC1Q8IUR5 882 aa15.61■□□□□ 0.09
SCAF4-202ENST00000399804 POTEMA6NI47 508 aa15.61■□□□□ 0.09
SCAF4-202ENST00000399804 CACNB1Q02641 598 aaPredicted RBP15.61■□□□□ 0.09
SCAF4-202ENST00000399804 ZNF543Q08ER8 600 aa15.61■□□□□ 0.09
SCAF4-202ENST00000399804 RAPGEF1Q13905 1077 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 139.2 ms