RNA–Protein interactions for RNA: ENST00000397066.8

CCNF-202, Transcript of cyclin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNF, Length 4,283 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-202ENST00000397066 PACS2Q86VP3 889 aa16.39■□□□□ 0.21
CCNF-202ENST00000397066 RETREG2Q8NC44 543 aa16.39■□□□□ 0.21
CCNF-202ENST00000397066 CALML4Q96GE6 196 aa16.39■□□□□ 0.21
CCNF-202ENST00000397066 VAT1LQ9HCJ6 419 aa16.39■□□□□ 0.21
CCNF-202ENST00000397066 KCPQ6ZWJ8 1503 aa16.39■□□□□ 0.21
CCNF-202ENST00000397066 RCCD1A6NED2 376 aa16.39■□□□□ 0.21
CCNF-202ENST00000397066 CCNT1O60563 726 aaKnown RBP16.39■□□□□ 0.21
CCNF-202ENST00000397066 TFAP4Q01664 338 aa16.39■□□□□ 0.21
CCNF-202ENST00000397066 BRIP1Q9BX63 1249 aa16.39■□□□□ 0.21
CCNF-202ENST00000397066 SLC39A2Q9NP94 309 aa16.39■□□□□ 0.21
CCNF-202ENST00000397066 SAMM50Q9Y512 469 aa16.39■□□□□ 0.21
CCNF-202ENST00000397066 PDE2AO00408 941 aaPredicted RBP16.39■□□□□ 0.21
CCNF-202ENST00000397066 SOGA3Q5TF21 947 aa16.39■□□□□ 0.21
CCNF-202ENST00000397066 KCTD16Q68DU8 428 aa16.39■□□□□ 0.21
CCNF-202ENST00000397066 TJP1Q07157 1748 aa16.39■□□□□ 0.21
CCNF-202ENST00000397066 A0A087WUV0 522 aaPredicted RBP16.38■□□□□ 0.21
CCNF-202ENST00000397066 NDUFAB1O14561 156 aa16.38■□□□□ 0.21
CCNF-202ENST00000397066 PLCG1P19174 1290 aa16.38■□□□□ 0.21
CCNF-202ENST00000397066 CCNE1P24864 410 aa16.38■□□□□ 0.21
CCNF-202ENST00000397066 TADA2BQ86TJ2 420 aa16.38■□□□□ 0.21
CCNF-202ENST00000397066 ZNF34Q8IZ26 560 aa16.38■□□□□ 0.21
CCNF-202ENST00000397066 FNBP4Q8N3X1 1017 aaPredicted RBP16.38■□□□□ 0.21
CCNF-202ENST00000397066 TNFRSF25Q93038 417 aa16.38■□□□□ 0.21
CCNF-202ENST00000397066 SMARCAL1Q9NZC9 954 aa16.38■□□□□ 0.21
CCNF-202ENST00000397066 BUB1O43683 1085 aa16.38■□□□□ 0.21
CCNF-202ENST00000397066 ATP1A2P50993 1020 aa16.38■□□□□ 0.21
CCNF-202ENST00000397066 IRX3P78415 501 aaPredicted RBP16.38■□□□□ 0.21
CCNF-202ENST00000397066 EZH2Q15910 746 aaKnown RBP16.38■□□□□ 0.21
CCNF-202ENST00000397066 PCDHA13Q9Y5I0 950 aa16.38■□□□□ 0.21
CCNF-202ENST00000397066 PLEKP08567 350 aaPredicted RBP16.38■□□□□ 0.21
CCNF-202ENST00000397066 ATP6V1AP38606 617 aa16.38■□□□□ 0.21
CCNF-202ENST00000397066 MNAT1P51948 309 aa16.38■□□□□ 0.21
CCNF-202ENST00000397066 NAPAP54920 295 aa16.38■□□□□ 0.21
CCNF-202ENST00000397066 ANKRD40Q6AI12 368 aa16.38■□□□□ 0.21
CCNF-202ENST00000397066 NFRKBQ6P4R8 1299 aa16.38■□□□□ 0.21
CCNF-202ENST00000397066 PNMA1Q8ND90 353 aa16.38■□□□□ 0.21
CCNF-202ENST00000397066 TMEM60Q9H2L4 133 aa16.38■□□□□ 0.21
CCNF-202ENST00000397066 HYOU1Q9Y4L1 999 aa16.38■□□□□ 0.21
CCNF-202ENST00000397066 GOLGA8KD6RF30 607 aa16.37■□□□□ 0.21
CCNF-202ENST00000397066 EXOC5O00471 708 aa16.37■□□□□ 0.21
CCNF-202ENST00000397066 EIF4A3P38919 411 aaKnown RBP16.37■□□□□ 0.21
CCNF-202ENST00000397066 RNASE9P60153 205 aaKnown RBP16.37■□□□□ 0.21
CCNF-202ENST00000397066 DZIP1Q86YF9 867 aaKnown RBP16.37■□□□□ 0.21
CCNF-202ENST00000397066 ZPR1O75312 459 aa16.37■□□□□ 0.21
CCNF-202ENST00000397066 RRP36Q96EU6 259 aaKnown RBP16.37■□□□□ 0.21
CCNF-202ENST00000397066 TSPY3P0CV98 308 aa16.37■□□□□ 0.21
CCNF-202ENST00000397066 TSPY8P0CW00 308 aa16.37■□□□□ 0.21
CCNF-202ENST00000397066 PCP11498 1178 aaKnown RBP16.37■□□□□ 0.21
CCNF-202ENST00000397066 INPP5BP32019 993 aa16.37■□□□□ 0.21
CCNF-202ENST00000397066 NPY5RQ15761 445 aa16.37■□□□□ 0.21
CCNF-202ENST00000397066 CFAP58Q5T655 872 aa16.37■□□□□ 0.21
CCNF-202ENST00000397066 DYMQ7RTS9 669 aa16.37■□□□□ 0.21
CCNF-202ENST00000397066 ZNF444Q8N0Y2 327 aaPredicted RBP16.37■□□□□ 0.21
CCNF-202ENST00000397066 RIOK1Q9BRS2 568 aaKnown RBP16.37■□□□□ 0.21
CCNF-202ENST00000397066 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.37■□□□□ 0.21
CCNF-202ENST00000397066 SNX12Q9UMY4 172 aa16.37■□□□□ 0.21
CCNF-202ENST00000397066 LAMB4A4D0S4 1761 aa16.37■□□□□ 0.21
CCNF-202ENST00000397066 FCER1AP12319 257 aa16.36■□□□□ 0.21
CCNF-202ENST00000397066 TECP42680 631 aa16.36■□□□□ 0.21
CCNF-202ENST00000397066 IRAK1P51617 712 aa16.36■□□□□ 0.21
CCNF-202ENST00000397066 KIF11P52732 1056 aa16.36■□□□□ 0.21
CCNF-202ENST00000397066 ATP2B2Q01814 1243 aa16.36■□□□□ 0.21
CCNF-202ENST00000397066 PPARDQ03181 441 aa16.36■□□□□ 0.21
CCNF-202ENST00000397066 KCNB1Q14721 858 aa16.36■□□□□ 0.21
CCNF-202ENST00000397066 CNNM4Q6P4Q7 775 aa16.36■□□□□ 0.21
CCNF-202ENST00000397066 GIMAP8Q8ND71 665 aaPredicted RBP16.36■□□□□ 0.21
CCNF-202ENST00000397066 ZNF507Q8TCN5 953 aa16.36■□□□□ 0.21
CCNF-202ENST00000397066 HDAC7Q8WUI4 952 aa16.36■□□□□ 0.21
CCNF-202ENST00000397066 HPS3Q969F9 1004 aa16.36■□□□□ 0.21
CCNF-202ENST00000397066 BTG4Q9NY30 223 aa16.36■□□□□ 0.21
CCNF-202ENST00000397066 NCK2O43639 380 aa16.36■□□□□ 0.21
CCNF-202ENST00000397066 SSBP05455 408 aaKnown RBP eCLIP16.36■□□□□ 0.21
CCNF-202ENST00000397066 GNAQP50148 359 aa16.36■□□□□ 0.21
CCNF-202ENST00000397066 PARP10Q53GL7 1025 aa16.36■□□□□ 0.21
CCNF-202ENST00000397066 SPATA4Q8NEY3 305 aa16.36■□□□□ 0.21
CCNF-202ENST00000397066 TFCP2L1Q9NZI6 479 aa16.36■□□□□ 0.21
CCNF-202ENST00000397066 FAM169AQ9Y6X4 670 aa16.36■□□□□ 0.21
CCNF-202ENST00000397066 FAM205AQ6ZU69 1335 aa16.36■□□□□ 0.21
CCNF-202ENST00000397066 ADAMTS3O15072 1205 aa16.36■□□□□ 0.21
CCNF-202ENST00000397066 RHOBTB3O94955 611 aa16.36■□□□□ 0.21
CCNF-202ENST00000397066 TCP1P17987 556 aaKnown RBP16.36■□□□□ 0.21
CCNF-202ENST00000397066 EVX2Q03828 476 aa16.36■□□□□ 0.21
CCNF-202ENST00000397066 ARID5AQ03989 594 aa16.36■□□□□ 0.21
CCNF-202ENST00000397066 DMGDHQ9UI17 866 aaKnown RBP16.36■□□□□ 0.21
CCNF-202ENST00000397066 MYH7P12883 1935 aa16.36■□□□□ 0.21
CCNF-202ENST00000397066 PRPF6O94906 941 aaKnown RBP16.36■□□□□ 0.21
CCNF-202ENST00000397066 FGFR1OPO95684 399 aaKnown RBP16.36■□□□□ 0.21
CCNF-202ENST00000397066 GOLGA8HP0CJ92 632 aa16.36■□□□□ 0.21
CCNF-202ENST00000397066 RASSF7Q02833 373 aa16.36■□□□□ 0.21
CCNF-202ENST00000397066 STK4Q13043 487 aa16.36■□□□□ 0.21
CCNF-202ENST00000397066 RNF187Q5TA31 235 aaPredicted RBP16.36■□□□□ 0.21
CCNF-202ENST00000397066 TTI2Q6NXR4 508 aa16.36■□□□□ 0.21
CCNF-202ENST00000397066 MAATS1Q7Z4T9 603 aa16.36■□□□□ 0.21
CCNF-202ENST00000397066 STAG2Q8N3U4 1231 aa16.36■□□□□ 0.21
CCNF-202ENST00000397066 LUC7LQ9NQ29 371 aaKnown RBP16.36■□□□□ 0.21
CCNF-202ENST00000397066 EHD2Q9NZN4 543 aa16.36■□□□□ 0.21
CCNF-202ENST00000397066 EPHB4P54760 987 aa16.35■□□□□ 0.21
CCNF-202ENST00000397066 OSBPL9Q96SU4 736 aa16.35■□□□□ 0.21
CCNF-202ENST00000397066 TRPM3Q9HCF6 1732 aaPredicted RBP16.35■□□□□ 0.21
CCNF-202ENST00000397066 WTIPA6NIX2 430 aaPredicted RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms