RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 BEGAINQ9BUH8 593 aa16.03■□□□□ 0.16
CCDC50-201ENST00000392455 XRCC5P13010 732 aaKnown RBP16.03■□□□□ 0.16
CCDC50-201ENST00000392455 HSPA6P17066 643 aa16.03■□□□□ 0.16
CCDC50-201ENST00000392455 FAM89AQ96GI7 184 aa16.03■□□□□ 0.16
CCDC50-201ENST00000392455 AATFQ9NY61 560 aaKnown RBP eCLIP16.03■□□□□ 0.16
CCDC50-201ENST00000392455 POLR2DO15514 142 aaKnown RBP16.03■□□□□ 0.16
CCDC50-201ENST00000392455 CLTAP09496 248 aa16.03■□□□□ 0.16
CCDC50-201ENST00000392455 MYRIPQ8NFW9 859 aa16.03■□□□□ 0.16
CCDC50-201ENST00000392455 DNAJC17Q9NVM6 304 aaKnown RBP16.03■□□□□ 0.16
CCDC50-201ENST00000392455 TCP1P17987 556 aaKnown RBP16.03■□□□□ 0.16
CCDC50-201ENST00000392455 ADCY8P40145 1251 aa16.03■□□□□ 0.16
CCDC50-201ENST00000392455 CLSTN2Q9H4D0 955 aa16.03■□□□□ 0.16
CCDC50-201ENST00000392455 LCMT1Q9UIC8 334 aa16.03■□□□□ 0.16
CCDC50-201ENST00000392455 NDE1Q9NXR1 346 aa16.02■□□□□ 0.16
CCDC50-201ENST00000392455 PLEKHM2Q8IWE5 1019 aa16.02■□□□□ 0.16
CCDC50-201ENST00000392455 UIMC1Q96RL1 719 aa16.02■□□□□ 0.16
CCDC50-201ENST00000392455 MRPL44Q9H9J2 332 aaKnown RBP16.02■□□□□ 0.16
CCDC50-201ENST00000392455 ATF2P15336 505 aa16.02■□□□□ 0.16
CCDC50-201ENST00000392455 KRT24Q2M2I5 525 aa16.02■□□□□ 0.16
CCDC50-201ENST00000392455 ACTR5Q9H9F9 607 aaPredicted RBP16.02■□□□□ 0.16
CCDC50-201ENST00000392455 IBTKQ9P2D0 1353 aaPredicted RBP16.02■□□□□ 0.16
CCDC50-201ENST00000392455 RASSF10A6NK89 507 aa16.02■□□□□ 0.16
CCDC50-201ENST00000392455 HIBADHP31937 336 aaKnown RBP16.02■□□□□ 0.16
CCDC50-201ENST00000392455 TSPYL6Q8N831 410 aa16.02■□□□□ 0.16
CCDC50-201ENST00000392455 ATP8B3O60423 1300 aa16.02■□□□□ 0.16
CCDC50-201ENST00000392455 GOLGA4Q13439 2230 aaKnown RBP16.02■□□□□ 0.16
CCDC50-201ENST00000392455 ARHGAP10A1A4S6 786 aa16.02■□□□□ 0.15
CCDC50-201ENST00000392455 A6NJR5 290 aa16.02■□□□□ 0.15
CCDC50-201ENST00000392455 TXKP42681 527 aa16.02■□□□□ 0.15
CCDC50-201ENST00000392455 ENAHQ8N8S7 591 aaPredicted RBP16.02■□□□□ 0.15
CCDC50-201ENST00000392455 MRGBPQ9NV56 204 aa16.02■□□□□ 0.15
CCDC50-201ENST00000392455 TRIM33Q9UPN9 1127 aa16.02■□□□□ 0.15
CCDC50-201ENST00000392455 GOLGA8IPA6NC78 632 aa16.02■□□□□ 0.15
CCDC50-201ENST00000392455 SESN3P58005 492 aa16.02■□□□□ 0.15
CCDC50-201ENST00000392455 LONRF2Q1L5Z9 754 aa16.02■□□□□ 0.15
CCDC50-201ENST00000392455 SCYL3Q8IZE3 742 aa16.02■□□□□ 0.15
CCDC50-201ENST00000392455 DCTPP1Q9H773 170 aa16.02■□□□□ 0.15
CCDC50-201ENST00000392455 ITM2BQ9Y287 266 aa16.02■□□□□ 0.15
CCDC50-201ENST00000392455 TEX14Q8IWB6 1497 aa16.01■□□□□ 0.15
CCDC50-201ENST00000392455 ZRANB2O95218 330 aaKnown RBP eCLIP16.01■□□□□ 0.15
CCDC50-201ENST00000392455 TBC1D7Q9P0N9 293 aa16.01■□□□□ 0.15
CCDC50-201ENST00000392455 GGA1Q9UJY5 639 aa16.01■□□□□ 0.15
CCDC50-201ENST00000392455 H3BRJ5 948 aa16.01■□□□□ 0.15
CCDC50-201ENST00000392455 TRIM59Q8IWR1 403 aa16.01■□□□□ 0.15
CCDC50-201ENST00000392455 MRPS26Q9BYN8 205 aaKnown RBP16.01■□□□□ 0.15
CCDC50-201ENST00000392455 BTG4Q9NY30 223 aa16.01■□□□□ 0.15
CCDC50-201ENST00000392455 PCDHB13Q9Y5F0 798 aa16.01■□□□□ 0.15
CCDC50-201ENST00000392455 YTHDC2Q9H6S0 1430 aaKnown RBP16.01■□□□□ 0.15
CCDC50-201ENST00000392455 OAS2P29728 719 aaKnown RBP16.01■□□□□ 0.15
CCDC50-201ENST00000392455 CPA1P15085 419 aa16.01■□□□□ 0.15
CCDC50-201ENST00000392455 ZBTB18Q99592 522 aa16.01■□□□□ 0.15
CCDC50-201ENST00000392455 RAPH1Q70E73 1250 aa16.01■□□□□ 0.15
CCDC50-201ENST00000392455 POLKQ9UBT6 870 aa16.01■□□□□ 0.15
CCDC50-201ENST00000392455 KRIT1O00522 736 aa16.01■□□□□ 0.15
CCDC50-201ENST00000392455 ATP8B1O43520 1251 aa16.01■□□□□ 0.15
CCDC50-201ENST00000392455 RASSF7Q02833 373 aa16.01■□□□□ 0.15
CCDC50-201ENST00000392455 ARHGAP44Q17R89 818 aa16.01■□□□□ 0.15
CCDC50-201ENST00000392455 ARHGAP18Q8N392 663 aa16.01■□□□□ 0.15
CCDC50-201ENST00000392455 EPAS1Q99814 870 aa16.01■□□□□ 0.15
CCDC50-201ENST00000392455 NBPF9Q3BBW0 867 aa16.01■□□□□ 0.15
CCDC50-201ENST00000392455 NBPF10Q6P3W6 841 aaKnown RBP16.01■□□□□ 0.15
CCDC50-201ENST00000392455 BZW1Q7L1Q6 419 aaKnown RBP16.01■□□□□ 0.15
CCDC50-201ENST00000392455 PHF21AQ96BD5 680 aa16.01■□□□□ 0.15
CCDC50-201ENST00000392455 ZFYVE9O95405 1425 aa16■□□□□ 0.15
CCDC50-201ENST00000392455 CREB3O43889 395 aa16■□□□□ 0.15
CCDC50-201ENST00000392455 ACTN1P12814 892 aa16■□□□□ 0.15
CCDC50-201ENST00000392455 C10orf76Q5T2E6 689 aa16■□□□□ 0.15
CCDC50-201ENST00000392455 NR1H4Q96RI1 486 aaPredicted RBP16■□□□□ 0.15
CCDC50-201ENST00000392455 HESX1Q9UBX0 185 aa16■□□□□ 0.15
CCDC50-201ENST00000392455 KRT25Q7Z3Z0 450 aa16■□□□□ 0.15
CCDC50-201ENST00000392455 DTNBP1Q96EV8 351 aa16■□□□□ 0.15
CCDC50-201ENST00000392455 ADPGKQ9BRR6 497 aa16■□□□□ 0.15
CCDC50-201ENST00000392455 TNNC2P02585 160 aa16■□□□□ 0.15
CCDC50-201ENST00000392455 KRT39Q6A163 491 aa16■□□□□ 0.15
CCDC50-201ENST00000392455 STMN3Q9NZ72 180 aa16■□□□□ 0.15
CCDC50-201ENST00000392455 A2MP01023 1474 aa16■□□□□ 0.15
CCDC50-201ENST00000392455 ATP6V1E2Q96A05 226 aa16■□□□□ 0.15
CCDC50-201ENST00000392455 TRAIPQ9BWF2 469 aa16■□□□□ 0.15
CCDC50-201ENST00000392455 LMCD1Q9NZU5 365 aa16■□□□□ 0.15
CCDC50-201ENST00000392455 TRPM2O94759 1503 aa16■□□□□ 0.15
CCDC50-201ENST00000392455 SPDYE2BA6NHP3 402 aa16■□□□□ 0.15
CCDC50-201ENST00000392455 SLC27A2O14975 620 aa16■□□□□ 0.15
CCDC50-201ENST00000392455 SPDYE6P0CI01 402 aa16■□□□□ 0.15
CCDC50-201ENST00000392455 PEX19P40855 299 aa16■□□□□ 0.15
CCDC50-201ENST00000392455 SPOUT1Q5T280 376 aaKnown RBP16■□□□□ 0.15
CCDC50-201ENST00000392455 TTLL7Q6ZT98 887 aa16■□□□□ 0.15
CCDC50-201ENST00000392455 ASPSCR1Q9BZE9 553 aa16■□□□□ 0.15
CCDC50-201ENST00000392455 MAGEF1Q9HAY2 307 aa16■□□□□ 0.15
CCDC50-201ENST00000392455 FRMD4AQ9P2Q2 1039 aaPredicted RBP16■□□□□ 0.15
CCDC50-201ENST00000392455 USTQ9Y2C2 406 aa16■□□□□ 0.15
CCDC50-201ENST00000392455 GCNT3O95395 438 aa16■□□□□ 0.15
CCDC50-201ENST00000392455 PDE6CP51160 858 aa16■□□□□ 0.15
CCDC50-201ENST00000392455 ARHGEF6Q15052 776 aa16■□□□□ 0.15
CCDC50-201ENST00000392455 OLFML3Q9NRN5 406 aa16■□□□□ 0.15
CCDC50-201ENST00000392455 C1orf112Q9NSG2 853 aa16■□□□□ 0.15
CCDC50-201ENST00000392455 SNX5Q9Y5X3 404 aa16■□□□□ 0.15
CCDC50-201ENST00000392455 MAGEA1P43355 309 aa15.99■□□□□ 0.15
CCDC50-201ENST00000392455 TIMM10P62072 90 aa15.99■□□□□ 0.15
CCDC50-201ENST00000392455 CATSPER1Q8NEC5 780 aa15.99■□□□□ 0.15
CCDC50-201ENST00000392455 OLFM3Q96PB7 478 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 1078.7 ms