RNA–Protein interactions for RNA: ENST00000380996.9

TSSC4-203, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSSC4, Length 1,544 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-203ENST00000380996 CPXCR1Q8N123 301 aa23.41■■□□□ 1.34
TSSC4-203ENST00000380996 HHIPL1Q96JK4 782 aa23.41■■□□□ 1.34
TSSC4-203ENST00000380996 ASCC2Q9H1I8 757 aaPredicted RBP23.41■■□□□ 1.34
TSSC4-203ENST00000380996 RAVER2Q9HCJ3 691 aaKnown RBP23.41■■□□□ 1.34
TSSC4-203ENST00000380996 PCDHA6Q9UN73 950 aa23.41■■□□□ 1.34
TSSC4-203ENST00000380996 PCDHA8Q9Y5H6 950 aa23.41■■□□□ 1.34
TSSC4-203ENST00000380996 LOC285556D6RIA3 1793 aa23.4■■□□□ 1.34
TSSC4-203ENST00000380996 PTPRFP10586 1907 aa23.4■■□□□ 1.34
TSSC4-203ENST00000380996 CCDC194A0A1B0GVG4 234 aa23.4■■□□□ 1.34
TSSC4-203ENST00000380996 M0R2N6 131 aa23.4■■□□□ 1.34
TSSC4-203ENST00000380996 ATP2A1O14983 1001 aa23.4■■□□□ 1.34
TSSC4-203ENST00000380996 RILPL1Q5EBL4 403 aa23.4■■□□□ 1.34
TSSC4-203ENST00000380996 LBX2Q6XYB7 198 aa23.4■■□□□ 1.34
TSSC4-203ENST00000380996 KRT25Q7Z3Z0 450 aa23.4■■□□□ 1.34
TSSC4-203ENST00000380996 CCDC102AQ96A19 550 aa23.4■■□□□ 1.34
TSSC4-203ENST00000380996 AGBL1Q96MI9 1066 aa23.4■■□□□ 1.34
TSSC4-203ENST00000380996 P2RX7Q99572 595 aaKnown RBP23.4■■□□□ 1.34
TSSC4-203ENST00000380996 NOL7Q9UMY1 257 aaKnown RBP23.4■■□□□ 1.34
TSSC4-203ENST00000380996 CSPP1Q1MSJ5 1256 aa23.39■■□□□ 1.34
TSSC4-203ENST00000380996 ANKRD23Q86SG2 305 aa23.39■■□□□ 1.34
TSSC4-203ENST00000380996 REPS2Q8NFH8 660 aa23.39■■□□□ 1.34
TSSC4-203ENST00000380996 SCAND2PQ9GZW5 306 aaPredicted RBP23.39■■□□□ 1.34
TSSC4-203ENST00000380996 MANSC4A6NHS7 340 aaPredicted RBP23.38■■□□□ 1.33
TSSC4-203ENST00000380996 HERVK_113P62684 666 aa23.38■■□□□ 1.33
TSSC4-203ENST00000380996 PIK3AP1Q6ZUJ8 805 aa23.38■■□□□ 1.33
TSSC4-203ENST00000380996 GTF3C2Q8WUA4 911 aaPredicted RBP23.38■■□□□ 1.33
TSSC4-203ENST00000380996 BRI3BPQ8WY22 251 aa23.38■■□□□ 1.33
TSSC4-203ENST00000380996 TEX13BQ9BXU2 312 aa23.38■■□□□ 1.33
TSSC4-203ENST00000380996 SLC10A3P09131 477 aa23.38■■□□□ 1.33
TSSC4-203ENST00000380996 ALAS1P13196 640 aa23.38■■□□□ 1.33
TSSC4-203ENST00000380996 MCM4P33991 863 aa23.38■■□□□ 1.33
TSSC4-203ENST00000380996 TRAPPC10P48553 1259 aa23.38■■□□□ 1.33
TSSC4-203ENST00000380996 TKFCQ3LXA3 575 aa23.38■■□□□ 1.33
TSSC4-203ENST00000380996 MCF2L2Q86YR7 1114 aa23.38■■□□□ 1.33
TSSC4-203ENST00000380996 RASGRP4Q8TDF6 673 aa23.38■■□□□ 1.33
TSSC4-203ENST00000380996 TFIP11Q9UBB9 837 aaKnown RBP23.38■■□□□ 1.33
TSSC4-203ENST00000380996 BIN2Q9UBW5 565 aaPredicted RBP23.38■■□□□ 1.33
TSSC4-203ENST00000380996 TESPA1A2RU30 521 aaPredicted RBP23.37■■□□□ 1.33
TSSC4-203ENST00000380996 BTBD19C9JJ37 291 aa23.37■■□□□ 1.33
TSSC4-203ENST00000380996 TMEM132BQ14DG7 1078 aa23.37■■□□□ 1.33
TSSC4-203ENST00000380996 NONOQ15233 471 aaKnown RBP eCLIP23.37■■□□□ 1.33
TSSC4-203ENST00000380996 SAMD3Q8N6K7 520 aa23.37■■□□□ 1.33
TSSC4-203ENST00000380996 CHAMP1Q96JM3 812 aa23.37■■□□□ 1.33
TSSC4-203ENST00000380996 ZNF214Q9UL59 606 aaPredicted RBP23.37■■□□□ 1.33
TSSC4-203ENST00000380996 CNPY2Q9Y2B0 182 aa23.37■■□□□ 1.33
TSSC4-203ENST00000380996 DDX11L8A8MPP1 907 aa23.36■■□□□ 1.33
TSSC4-203ENST00000380996 PIK3CDO00329 1044 aa23.36■■□□□ 1.33
TSSC4-203ENST00000380996 PDHXO00330 501 aa23.36■■□□□ 1.33
TSSC4-203ENST00000380996 FOSP01100 380 aaPredicted RBP23.36■■□□□ 1.33
TSSC4-203ENST00000380996 STAT3P40763 770 aa23.36■■□□□ 1.33
TSSC4-203ENST00000380996 CLK2P49760 499 aaKnown RBP23.36■■□□□ 1.33
TSSC4-203ENST00000380996 INHBEP58166 350 aa23.36■■□□□ 1.33
TSSC4-203ENST00000380996 AP3B2Q13367 1082 aa23.36■■□□□ 1.33
TSSC4-203ENST00000380996 JAKMIP3Q5VZ66 844 aa23.36■■□□□ 1.33
TSSC4-203ENST00000380996 SNRNP48Q6IEG0 339 aaKnown RBP23.36■■□□□ 1.33
TSSC4-203ENST00000380996 RTEL1Q9NZ71 1219 aa23.36■■□□□ 1.33
TSSC4-203ENST00000380996 GCOM1H8Y6P7 765 aaPredicted RBP23.35■■□□□ 1.33
TSSC4-203ENST00000380996 MEIS2O14770 477 aa23.35■■□□□ 1.33
TSSC4-203ENST00000380996 ADAMTS3O15072 1205 aa23.35■■□□□ 1.33
TSSC4-203ENST00000380996 POLR2MP0CAP2 368 aa23.35■■□□□ 1.33
TSSC4-203ENST00000380996 PLS1Q14651 629 aa23.35■■□□□ 1.33
TSSC4-203ENST00000380996 UBE2SQ16763 222 aa23.35■■□□□ 1.33
TSSC4-203ENST00000380996 EARS2Q5JPH6 523 aaKnown RBP23.35■■□□□ 1.33
TSSC4-203ENST00000380996 TRERF1Q96PN7 1200 aa23.35■■□□□ 1.33
TSSC4-203ENST00000380996 USP28Q96RU2 1077 aa23.35■■□□□ 1.33
TSSC4-203ENST00000380996 POLR3EQ9NVU0 708 aa23.35■■□□□ 1.33
TSSC4-203ENST00000380996 OPLAHO14841 1288 aa23.34■■□□□ 1.33
TSSC4-203ENST00000380996 FIBPO43427 364 aa23.34■■□□□ 1.33
TSSC4-203ENST00000380996 CFBP00751 764 aa23.34■■□□□ 1.33
TSSC4-203ENST00000380996 TAL1P17542 331 aaPredicted RBP23.34■■□□□ 1.33
TSSC4-203ENST00000380996 PTMSP20962 102 aa23.34■■□□□ 1.33
TSSC4-203ENST00000380996 NFKBIBQ15653 356 aa23.34■■□□□ 1.33
TSSC4-203ENST00000380996 ANO1Q5XXA6 986 aa23.34■■□□□ 1.33
TSSC4-203ENST00000380996 USP17L6PQ6QN14 398 aa23.34■■□□□ 1.33
TSSC4-203ENST00000380996 SPATA32Q96LK8 384 aa23.34■■□□□ 1.33
TSSC4-203ENST00000380996 MAP3K20Q9NYL2 800 aaKnown RBP23.34■■□□□ 1.33
TSSC4-203ENST00000380996 RABGAP1Q9Y3P9 1069 aa23.34■■□□□ 1.33
TSSC4-203ENST00000380996 CEBPZQ03701 1054 aaKnown RBP23.33■■□□□ 1.33
TSSC4-203ENST00000380996 SMCR8Q8TEV9 937 aaPredicted RBP23.33■■□□□ 1.33
TSSC4-203ENST00000380996 MAF1Q9H063 256 aa23.33■■□□□ 1.33
TSSC4-203ENST00000380996 ZCCHC17Q9NP64 241 aaKnown RBP23.33■■□□□ 1.33
TSSC4-203ENST00000380996 HOMER2Q9NSB8 354 aa23.33■■□□□ 1.33
TSSC4-203ENST00000380996 TMEM260Q9NX78 707 aa23.33■■□□□ 1.33
TSSC4-203ENST00000380996 RLFQ13129 1914 aa23.33■■□□□ 1.33
TSSC4-203ENST00000380996 FAM205CA6NFA0 338 aa23.33■■□□□ 1.32
TSSC4-203ENST00000380996 SPDYE3A6NKU9 549 aa23.33■■□□□ 1.32
TSSC4-203ENST00000380996 YEATS4O95619 227 aa23.33■■□□□ 1.32
TSSC4-203ENST00000380996 ATP2B1P20020 1258 aa23.33■■□□□ 1.32
TSSC4-203ENST00000380996 NASPP49321 788 aaPredicted RBP23.33■■□□□ 1.32
TSSC4-203ENST00000380996 TOB1P50616 345 aaPredicted RBP23.33■■□□□ 1.32
TSSC4-203ENST00000380996 NOM1Q5C9Z4 860 aaKnown RBP23.33■■□□□ 1.32
TSSC4-203ENST00000380996 CLEC4DQ8WXI8 215 aa23.33■■□□□ 1.32
TSSC4-203ENST00000380996 PARK7Q99497 189 aaKnown RBP23.33■■□□□ 1.32
TSSC4-203ENST00000380996 PAGR1Q9BTK6 254 aa23.33■■□□□ 1.32
TSSC4-203ENST00000380996 CREBZFQ9NS37 354 aa23.33■■□□□ 1.32
TSSC4-203ENST00000380996 RNF146Q9NTX7 359 aa23.33■■□□□ 1.32
TSSC4-203ENST00000380996 BTBD7Q9P203 1132 aa23.33■■□□□ 1.32
TSSC4-203ENST00000380996 CEP131Q9UPN4 1083 aa23.33■■□□□ 1.32
TSSC4-203ENST00000380996 BMP15O95972 392 aa23.32■■□□□ 1.32
TSSC4-203ENST00000380996 COPB2P35606 906 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms