RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 N4BP1O75113 896 aaKnown RBP13.57□□□□□ -0.24
CHD3-203ENST00000380358 MESDQ14696 234 aa13.57□□□□□ -0.24
CHD3-203ENST00000380358 ZNF532Q9HCE3 1301 aa13.57□□□□□ -0.24
CHD3-203ENST00000380358 LZICQ8WZA0 190 aa13.57□□□□□ -0.24
CHD3-203ENST00000380358 MYBP10242 640 aa13.57□□□□□ -0.24
CHD3-203ENST00000380358 GARSP41250 739 aaKnown RBP13.57□□□□□ -0.24
CHD3-203ENST00000380358 MIGA2Q7L4E1 593 aa13.57□□□□□ -0.24
CHD3-203ENST00000380358 PIDD1Q9HB75 910 aa13.57□□□□□ -0.24
CHD3-203ENST00000380358 A0A1B0GUA9 196 aa13.57□□□□□ -0.24
CHD3-203ENST00000380358 FMNL1O95466 1100 aaPredicted RBP13.57□□□□□ -0.24
CHD3-203ENST00000380358 CD58P19256 250 aa13.57□□□□□ -0.24
CHD3-203ENST00000380358 TRIP13Q15645 432 aaPredicted RBP13.57□□□□□ -0.24
CHD3-203ENST00000380358 NUDCD3Q8IVD9 361 aa13.57□□□□□ -0.24
CHD3-203ENST00000380358 DBNDD2Q9BQY9 259 aa13.57□□□□□ -0.24
CHD3-203ENST00000380358 SLC39A2Q9NP94 309 aa13.57□□□□□ -0.24
CHD3-203ENST00000380358 TBK1Q9UHD2 729 aa13.57□□□□□ -0.24
CHD3-203ENST00000380358 RAP1GDS1P52306 607 aa13.57□□□□□ -0.24
CHD3-203ENST00000380358 UBE3AQ05086 875 aa13.57□□□□□ -0.24
CHD3-203ENST00000380358 THOC5Q13769 683 aaKnown RBP13.57□□□□□ -0.24
CHD3-203ENST00000380358 PDCD2Q16342 344 aaPredicted RBP13.57□□□□□ -0.24
CHD3-203ENST00000380358 CLCA2Q9UQC9 943 aa13.57□□□□□ -0.24
CHD3-203ENST00000380358 EVI5O60447 810 aa13.56□□□□□ -0.24
CHD3-203ENST00000380358 TOM1L1O75674 476 aa13.56□□□□□ -0.24
CHD3-203ENST00000380358 CAVIN2O95810 425 aa13.56□□□□□ -0.24
CHD3-203ENST00000380358 PMLP29590 882 aa13.56□□□□□ -0.24
CHD3-203ENST00000380358 KCNQ4P56696 695 aa13.56□□□□□ -0.24
CHD3-203ENST00000380358 POLR2FP61218 127 aaKnown RBP13.56□□□□□ -0.24
CHD3-203ENST00000380358 HIF1AQ16665 826 aa13.56□□□□□ -0.24
CHD3-203ENST00000380358 CERKLQ49MI3 558 aaPredicted RBP13.56□□□□□ -0.24
CHD3-203ENST00000380358 CFAP221Q4G0U5 840 aa13.56□□□□□ -0.24
CHD3-203ENST00000380358 PHACTR3Q96KR7 559 aa13.56□□□□□ -0.24
CHD3-203ENST00000380358 RASSF4Q9H2L5 321 aa13.56□□□□□ -0.24
CHD3-203ENST00000380358 PSTPIP2Q9H939 334 aa13.56□□□□□ -0.24
CHD3-203ENST00000380358 NCF2P19878 526 aaPredicted RBP13.56□□□□□ -0.24
CHD3-203ENST00000380358 PTPREP23469 700 aa13.56□□□□□ -0.24
CHD3-203ENST00000380358 LIG3P49916 1009 aa13.56□□□□□ -0.24
CHD3-203ENST00000380358 GJA10Q969M2 543 aa13.56□□□□□ -0.24
CHD3-203ENST00000380358 TEKT2Q9UIF3 430 aa13.56□□□□□ -0.24
CHD3-203ENST00000380358 TROQ12816 1431 aaPredicted RBP13.56□□□□□ -0.24
CHD3-203ENST00000380358 XRCC5P13010 732 aaKnown RBP13.56□□□□□ -0.24
CHD3-203ENST00000380358 STAT1P42224 750 aa13.56□□□□□ -0.24
CHD3-203ENST00000380358 RNF219Q5W0B1 726 aaPredicted RBP13.56□□□□□ -0.24
CHD3-203ENST00000380358 SYCE1Q8N0S2 351 aa13.56□□□□□ -0.24
CHD3-203ENST00000380358 TSPYL6Q8N831 410 aa13.56□□□□□ -0.24
CHD3-203ENST00000380358 SLC4A7Q9Y6M7 1214 aa13.56□□□□□ -0.24
CHD3-203ENST00000380358 ZSCAN9O15535 394 aaPredicted RBP13.56□□□□□ -0.24
CHD3-203ENST00000380358 ZRANB2O95218 330 aaKnown RBP eCLIP13.56□□□□□ -0.24
CHD3-203ENST00000380358 ZAP70P43403 619 aa13.56□□□□□ -0.24
CHD3-203ENST00000380358 TFAMQ00059 246 aaKnown RBP13.56□□□□□ -0.24
CHD3-203ENST00000380358 NFX1Q12986 1120 aaKnown RBP13.56□□□□□ -0.24
CHD3-203ENST00000380358 DHX29Q7Z478 1369 aaKnown RBP13.56□□□□□ -0.24
CHD3-203ENST00000380358 POLR2MP0CAP2 368 aa13.56□□□□□ -0.24
CHD3-203ENST00000380358 KCTD1Q719H9 257 aa13.56□□□□□ -0.24
CHD3-203ENST00000380358 TEKT1Q969V4 418 aa13.56□□□□□ -0.24
CHD3-203ENST00000380358 DESI2Q9BSY9 194 aa13.56□□□□□ -0.24
CHD3-203ENST00000380358 TRAIPQ9BWF2 469 aa13.56□□□□□ -0.24
CHD3-203ENST00000380358 SYTL2Q9HCH5 934 aa13.56□□□□□ -0.24
CHD3-203ENST00000380358 CCDC141Q6ZP82 1450 aa13.56□□□□□ -0.24
CHD3-203ENST00000380358 LRRC9Q6ZRR7 1453 aa13.56□□□□□ -0.24
CHD3-203ENST00000380358 SRGAP2CP0DJJ0 459 aa13.56□□□□□ -0.24
CHD3-203ENST00000380358 PDZD4Q76G19 769 aaPredicted RBP13.56□□□□□ -0.24
CHD3-203ENST00000380358 PI4K2BG5E9Z4 385 aa13.55□□□□□ -0.24
CHD3-203ENST00000380358 RNF40O75150 1001 aa13.55□□□□□ -0.24
CHD3-203ENST00000380358 ZKSCAN8Q15776 578 aaPredicted RBP13.55□□□□□ -0.24
CHD3-203ENST00000380358 FBXL13Q8NEE6 735 aa13.55□□□□□ -0.24
CHD3-203ENST00000380358 THOC1Q96FV9 657 aaKnown RBP13.55□□□□□ -0.24
CHD3-203ENST00000380358 SLC8A2Q9UPR5 921 aa13.55□□□□□ -0.24
CHD3-203ENST00000380358 ATF2P15336 505 aa13.55□□□□□ -0.24
CHD3-203ENST00000380358 POSTNQ15063 836 aa13.55□□□□□ -0.24
CHD3-203ENST00000380358 REXO1Q8N1G1 1221 aaKnown RBP13.55□□□□□ -0.24
CHD3-203ENST00000380358 SUPT20HQ8NEM7 779 aa13.55□□□□□ -0.24
CHD3-203ENST00000380358 FAM49AQ9H0Q0 323 aaPredicted RBP13.55□□□□□ -0.24
CHD3-203ENST00000380358 SART1O43290 800 aaKnown RBP13.55□□□□□ -0.24
CHD3-203ENST00000380358 FAM178BQ8IXR5 827 aa13.55□□□□□ -0.24
CHD3-203ENST00000380358 RAPGEF5Q92565 580 aa13.55□□□□□ -0.24
CHD3-203ENST00000380358 HFM1A2PYH4 1435 aa13.55□□□□□ -0.24
CHD3-203ENST00000380358 LRRN2O75325 713 aa13.55□□□□□ -0.24
CHD3-203ENST00000380358 GYG1P46976 350 aa13.55□□□□□ -0.24
CHD3-203ENST00000380358 EIF4A2Q14240 407 aaKnown RBP13.55□□□□□ -0.24
CHD3-203ENST00000380358 SPOPLQ6IQ16 392 aa13.55□□□□□ -0.24
CHD3-203ENST00000380358 SPATA5Q8NB90 893 aa13.55□□□□□ -0.24
CHD3-203ENST00000380358 P3H4Q92791 437 aa13.55□□□□□ -0.24
CHD3-203ENST00000380358 RAD18Q9NS91 495 aa13.55□□□□□ -0.24
CHD3-203ENST00000380358 MAST3O60307 1309 aa13.55□□□□□ -0.24
CHD3-203ENST00000380358 SLC27A2O14975 620 aa13.55□□□□□ -0.24
CHD3-203ENST00000380358 ZNF202O95125 648 aa13.55□□□□□ -0.24
CHD3-203ENST00000380358 INHBAP08476 426 aa13.55□□□□□ -0.24
CHD3-203ENST00000380358 TRIM67Q6ZTA4 783 aa13.55□□□□□ -0.24
CHD3-203ENST00000380358 PLA2G4DQ86XP0 818 aa13.55□□□□□ -0.24
CHD3-203ENST00000380358 HIPK4Q8NE63 616 aa13.55□□□□□ -0.24
CHD3-203ENST00000380358 HSPH1Q92598 858 aa13.55□□□□□ -0.24
CHD3-203ENST00000380358 ABHD8Q96I13 439 aa13.55□□□□□ -0.24
CHD3-203ENST00000380358 DDX25Q9UHL0 483 aaKnown RBP13.55□□□□□ -0.24
CHD3-203ENST00000380358 PDE8AO60658 829 aa13.55□□□□□ -0.24
CHD3-203ENST00000380358 ANXA13P27216 316 aa13.55□□□□□ -0.24
CHD3-203ENST00000380358 KIF19Q2TAC6 998 aa13.55□□□□□ -0.24
CHD3-203ENST00000380358 NCLNQ969V3 563 aa13.55□□□□□ -0.24
CHD3-203ENST00000380358 ZNF668Q96K58 619 aaPredicted RBP13.55□□□□□ -0.24
CHD3-203ENST00000380358 DNAJC17Q9NVM6 304 aaKnown RBP13.55□□□□□ -0.24
CHD3-203ENST00000380358 STX1BP61266 288 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms