RNA–Protein interactions for RNA: ENST00000377465.5

SEC23B-203, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23B, Length 3,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-203ENST00000377465 PNMA6AP0CW24 399 aaPredicted RBP12.22□□□□□ -0.45
SEC23B-203ENST00000377465 YBX3P16989 372 aaKnown RBP eCLIP12.22□□□□□ -0.45
SEC23B-203ENST00000377465 RBM5P52756 815 aaKnown RBP eCLIP12.22□□□□□ -0.45
SEC23B-203ENST00000377465 SF3A1Q15459 793 aaKnown RBP12.22□□□□□ -0.45
SEC23B-203ENST00000377465 MAP3K11Q16584 847 aa12.22□□□□□ -0.45
SEC23B-203ENST00000377465 NBPF9Q3BBW0 867 aa12.22□□□□□ -0.45
SEC23B-203ENST00000377465 ARL6IP4Q66PJ3 421 aaKnown RBP12.22□□□□□ -0.45
SEC23B-203ENST00000377465 TNMDQ9H2S6 317 aa12.22□□□□□ -0.45
SEC23B-203ENST00000377465 JMJD4Q9H9V9 463 aa12.22□□□□□ -0.45
SEC23B-203ENST00000377465 NR1I2O75469 434 aa12.22□□□□□ -0.45
SEC23B-203ENST00000377465 PRPHP41219 470 aa12.22□□□□□ -0.45
SEC23B-203ENST00000377465 TRAF1Q13077 416 aa12.22□□□□□ -0.45
SEC23B-203ENST00000377465 RESP18Q5W5W9 173 aa12.22□□□□□ -0.45
SEC23B-203ENST00000377465 MOXD1Q6UVY6 613 aa12.22□□□□□ -0.45
SEC23B-203ENST00000377465 C4orf32Q8N8J7 132 aa12.22□□□□□ -0.45
SEC23B-203ENST00000377465 CRYGNQ8WXF5 182 aa12.22□□□□□ -0.45
SEC23B-203ENST00000377465 MBOAT7Q96N66 472 aa12.22□□□□□ -0.45
SEC23B-203ENST00000377465 NUP62CLQ9H1M0 184 aa12.22□□□□□ -0.45
SEC23B-203ENST00000377465 PNMA2Q9UL42 364 aa12.22□□□□□ -0.45
SEC23B-203ENST00000377465 MTMR7Q9Y216 660 aa12.22□□□□□ -0.45
SEC23B-203ENST00000377465 COL11A1P12107 1806 aaPredicted RBP12.21□□□□□ -0.45
SEC23B-203ENST00000377465 PIK3CDO00329 1044 aa12.21□□□□□ -0.45
SEC23B-203ENST00000377465 CTAGE5O15320 804 aa12.21□□□□□ -0.45
SEC23B-203ENST00000377465 SLU7O95391 586 aaKnown RBP12.21□□□□□ -0.45
SEC23B-203ENST00000377465 ATP2B1P20020 1258 aa12.21□□□□□ -0.45
SEC23B-203ENST00000377465 PTPREP23469 700 aa12.21□□□□□ -0.45
SEC23B-203ENST00000377465 ICA1Q05084 483 aa12.21□□□□□ -0.45
SEC23B-203ENST00000377465 JMYQ8N9B5 988 aa12.21□□□□□ -0.45
SEC23B-203ENST00000377465 DRC1Q96MC2 740 aa12.21□□□□□ -0.45
SEC23B-203ENST00000377465 KIAA1683Q9H0B3 1180 aa12.21□□□□□ -0.45
SEC23B-203ENST00000377465 RANBP17Q9H2T7 1088 aaKnown RBP12.21□□□□□ -0.45
SEC23B-203ENST00000377465 CLSTN2Q9H4D0 955 aa12.21□□□□□ -0.45
SEC23B-203ENST00000377465 RIC8AQ9NPQ8 531 aa12.21□□□□□ -0.45
SEC23B-203ENST00000377465 ADARB2Q9NS39 739 aaKnown RBP12.21□□□□□ -0.45
SEC23B-203ENST00000377465 SRPRBQ9Y5M8 271 aaKnown RBP12.21□□□□□ -0.45
SEC23B-203ENST00000377465 ZBTB5O15062 677 aa12.21□□□□□ -0.46
SEC23B-203ENST00000377465 ASNSP08243 561 aa12.21□□□□□ -0.46
SEC23B-203ENST00000377465 ATP2C1P98194 919 aaPredicted RBP12.21□□□□□ -0.46
SEC23B-203ENST00000377465 GPS2Q13227 327 aa12.21□□□□□ -0.46
SEC23B-203ENST00000377465 BLIDQ8IZY5 108 aa12.21□□□□□ -0.46
SEC23B-203ENST00000377465 FMR1NBQ8N0W7 255 aaPredicted RBP12.21□□□□□ -0.46
SEC23B-203ENST00000377465 LPAR1Q92633 364 aa12.21□□□□□ -0.46
SEC23B-203ENST00000377465 SMARCE1Q969G3 411 aa12.21□□□□□ -0.46
SEC23B-203ENST00000377465 ARHGEF10LQ9HCE6 1279 aa12.21□□□□□ -0.46
SEC23B-203ENST00000377465 HACL1Q9UJ83 578 aa12.21□□□□□ -0.46
SEC23B-203ENST00000377465 FBXO2Q9UK22 296 aaPredicted RBP12.21□□□□□ -0.46
SEC23B-203ENST00000377465 PCDHA6Q9UN73 950 aa12.21□□□□□ -0.46
SEC23B-203ENST00000377465 RRP15Q9Y3B9 282 aaKnown RBP12.21□□□□□ -0.46
SEC23B-203ENST00000377465 PCDHA8Q9Y5H6 950 aa12.21□□□□□ -0.46
SEC23B-203ENST00000377465 CLIC4Q9Y696 253 aa12.21□□□□□ -0.46
SEC23B-203ENST00000377465 POLR3GO15318 223 aaPredicted RBP12.2□□□□□ -0.46
SEC23B-203ENST00000377465 CACNB3P54284 484 aa12.2□□□□□ -0.46
SEC23B-203ENST00000377465 SEMA3FQ13275 785 aa12.2□□□□□ -0.46
SEC23B-203ENST00000377465 TYW1BQ6NUM6 668 aa12.2□□□□□ -0.46
SEC23B-203ENST00000377465 USP50Q70EL3 339 aaPredicted RBP12.2□□□□□ -0.46
SEC23B-203ENST00000377465 CABP5Q9NP86 173 aa12.2□□□□□ -0.46
SEC23B-203ENST00000377465 CLIP2Q9UDT6 1046 aa12.2□□□□□ -0.46
SEC23B-203ENST00000377465 PCDHA7Q9UN72 937 aa12.2□□□□□ -0.46
SEC23B-203ENST00000377465 STX8Q9UNK0 236 aa12.2□□□□□ -0.46
SEC23B-203ENST00000377465 LCTP09848 1927 aa12.2□□□□□ -0.46
SEC23B-203ENST00000377465 BTBD18B2RXH4 712 aa12.2□□□□□ -0.46
SEC23B-203ENST00000377465 H7C1D1 291 aa12.2□□□□□ -0.46
SEC23B-203ENST00000377465 SPTLC2O15270 562 aa12.2□□□□□ -0.46
SEC23B-203ENST00000377465 FDX1P10109 184 aa12.2□□□□□ -0.46
SEC23B-203ENST00000377465 DCAF15Q66K64 600 aa12.2□□□□□ -0.46
SEC23B-203ENST00000377465 FAM160B2Q86V87 743 aa12.2□□□□□ -0.46
SEC23B-203ENST00000377465 FERMT2Q96AC1 680 aa12.2□□□□□ -0.46
SEC23B-203ENST00000377465 GOPCQ9HD26 462 aa12.2□□□□□ -0.46
SEC23B-203ENST00000377465 FRMPD4Q14CM0 1322 aa12.2□□□□□ -0.46
SEC23B-203ENST00000377465 GNA11P29992 359 aa12.2□□□□□ -0.46
SEC23B-203ENST00000377465 FAM160A1Q05DH4 1040 aa12.2□□□□□ -0.46
SEC23B-203ENST00000377465 RASA3Q14644 834 aa12.2□□□□□ -0.46
SEC23B-203ENST00000377465 SEPT2Q15019 361 aa12.2□□□□□ -0.46
SEC23B-203ENST00000377465 SH3D19Q5HYK7 790 aa12.2□□□□□ -0.46
SEC23B-203ENST00000377465 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.2□□□□□ -0.46
SEC23B-203ENST00000377465 NAP1L4Q99733 375 aaKnown RBP12.2□□□□□ -0.46
SEC23B-203ENST00000377465 ZNF341Q9BYN7 854 aa12.2□□□□□ -0.46
SEC23B-203ENST00000377465 VCPKMTQ9H867 229 aa12.2□□□□□ -0.46
SEC23B-203ENST00000377465 NRBP1Q9UHY1 535 aa12.2□□□□□ -0.46
SEC23B-203ENST00000377465 hCG_1642624A0A1W2PR95 340 aa12.19□□□□□ -0.46
SEC23B-203ENST00000377465 CLCN6P51797 869 aa12.19□□□□□ -0.46
SEC23B-203ENST00000377465 TTC31Q49AM3 519 aaPredicted RBP12.19□□□□□ -0.46
SEC23B-203ENST00000377465 ILDR2Q71H61 639 aa12.19□□□□□ -0.46
SEC23B-203ENST00000377465 KRT25Q7Z3Z0 450 aa12.19□□□□□ -0.46
SEC23B-203ENST00000377465 DRC7Q8IY82 874 aa12.19□□□□□ -0.46
SEC23B-203ENST00000377465 ADGRF4Q8IZF3 695 aa12.19□□□□□ -0.46
SEC23B-203ENST00000377465 TMEM39BQ9GZU3 492 aa12.19□□□□□ -0.46
SEC23B-203ENST00000377465 MAP3K20Q9NYL2 800 aaKnown RBP12.19□□□□□ -0.46
SEC23B-203ENST00000377465 DONSONQ9NYP3 566 aa12.19□□□□□ -0.46
SEC23B-203ENST00000377465 POLR2AP24928 1970 aaKnown RBP12.19□□□□□ -0.46
SEC23B-203ENST00000377465 MYPNQ86TC9 1320 aa12.19□□□□□ -0.46
SEC23B-203ENST00000377465 A0A1W2PRG0 241 aa12.19□□□□□ -0.46
SEC23B-203ENST00000377465 TCP10L2B9ZVM9 353 aa12.19□□□□□ -0.46
SEC23B-203ENST00000377465 CAVIN2O95810 425 aa12.19□□□□□ -0.46
SEC23B-203ENST00000377465 TCP10Q12799 353 aa12.19□□□□□ -0.46
SEC23B-203ENST00000377465 NOM1Q5C9Z4 860 aaKnown RBP12.19□□□□□ -0.46
SEC23B-203ENST00000377465 VPS54Q9P1Q0 977 aa12.19□□□□□ -0.46
SEC23B-203ENST00000377465 CYP3A7-CYP3A51PA0A087WV96 503 aa12.18□□□□□ -0.46
SEC23B-203ENST00000377465 SHTN1A0MZ66 631 aa12.18□□□□□ -0.46
SEC23B-203ENST00000377465 F5H6K3 240 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms