RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 PCDHA4Q9UN74 947 aa11.88□□□□□ -0.51
PTPRK-205ENST00000368213 AGLP35573 1532 aa11.88□□□□□ -0.51
PTPRK-205ENST00000368213 UQCRHP07919 91 aa11.88□□□□□ -0.51
PTPRK-205ENST00000368213 HOXA13P31271 388 aaPredicted RBP11.88□□□□□ -0.51
PTPRK-205ENST00000368213 SEPT2Q15019 361 aa11.88□□□□□ -0.51
PTPRK-205ENST00000368213 CNGA4Q8IV77 575 aa11.88□□□□□ -0.51
PTPRK-205ENST00000368213 CSRNP2Q9H175 543 aa11.88□□□□□ -0.51
PTPRK-205ENST00000368213 C1orf112Q9NSG2 853 aa11.88□□□□□ -0.51
PTPRK-205ENST00000368213 CEP170BQ9Y4F5 1589 aaPredicted RBP11.88□□□□□ -0.51
PTPRK-205ENST00000368213 GMPSP49915 693 aaPredicted RBP11.88□□□□□ -0.51
PTPRK-205ENST00000368213 TNNC1P63316 161 aa11.88□□□□□ -0.51
PTPRK-205ENST00000368213 SCARF1Q14162 830 aa11.88□□□□□ -0.51
PTPRK-205ENST00000368213 C7orf31Q8N865 590 aa11.88□□□□□ -0.51
PTPRK-205ENST00000368213 GSDMBQ8TAX9 411 aa11.88□□□□□ -0.51
PTPRK-205ENST00000368213 NELFBQ8WX92 580 aa11.88□□□□□ -0.51
PTPRK-205ENST00000368213 RNF216Q9NWF9 866 aaPredicted RBP11.88□□□□□ -0.51
PTPRK-205ENST00000368213 ARHGEF37A1IGU5 675 aa11.87□□□□□ -0.51
PTPRK-205ENST00000368213 ZNF853P0CG23 659 aa11.87□□□□□ -0.51
PTPRK-205ENST00000368213 MCAMP43121 646 aa11.87□□□□□ -0.51
PTPRK-205ENST00000368213 SREBF2Q12772 1141 aa11.87□□□□□ -0.51
PTPRK-205ENST00000368213 SNAPC2Q13487 334 aa11.87□□□□□ -0.51
PTPRK-205ENST00000368213 TRERF1Q96PN7 1200 aa11.87□□□□□ -0.51
PTPRK-205ENST00000368213 KIAA1024Q9UPX6 916 aa11.87□□□□□ -0.51
PTPRK-205ENST00000368213 ZSCAN30Q86W11 494 aa11.87□□□□□ -0.51
PTPRK-205ENST00000368213 SLC17A8Q8NDX2 589 aa11.87□□□□□ -0.51
PTPRK-205ENST00000368213 GCNAQ96QF7 691 aa11.87□□□□□ -0.51
PTPRK-205ENST00000368213 ZNF202O95125 648 aa11.87□□□□□ -0.51
PTPRK-205ENST00000368213 GNA14O95837 355 aa11.87□□□□□ -0.51
PTPRK-205ENST00000368213 PARK7Q99497 189 aaKnown RBP11.87□□□□□ -0.51
PTPRK-205ENST00000368213 KMT5AQ9NQR1 393 aa11.87□□□□□ -0.51
PTPRK-205ENST00000368213 PFKFB2O60825 505 aa11.87□□□□□ -0.51
PTPRK-205ENST00000368213 ME3Q16798 604 aa11.87□□□□□ -0.51
PTPRK-205ENST00000368213 STRIP1Q5VSL9 837 aa11.87□□□□□ -0.51
PTPRK-205ENST00000368213 CCDC127Q96BQ5 260 aa11.87□□□□□ -0.51
PTPRK-205ENST00000368213 ISCA1Q9BUE6 129 aa11.87□□□□□ -0.51
PTPRK-205ENST00000368213 TYW5A2RUC4 315 aaKnown RBP11.87□□□□□ -0.51
PTPRK-205ENST00000368213 SKILP12757 684 aa11.87□□□□□ -0.51
PTPRK-205ENST00000368213 COPB2P35606 906 aa11.87□□□□□ -0.51
PTPRK-205ENST00000368213 RAB3IL1Q8TBN0 382 aa11.87□□□□□ -0.51
PTPRK-205ENST00000368213 ANKRD36BP1Q96IX9 119 aa11.87□□□□□ -0.51
PTPRK-205ENST00000368213 PPP1R9BQ96SB3 815 aa11.87□□□□□ -0.51
PTPRK-205ENST00000368213 CTTNBP2NLQ9P2B4 639 aa11.87□□□□□ -0.51
PTPRK-205ENST00000368213 ZBTB12Q9Y330 459 aaPredicted RBP11.87□□□□□ -0.51
PTPRK-205ENST00000368213 PNMA6FA0A0J9YX94 578 aa11.86□□□□□ -0.51
PTPRK-205ENST00000368213 USP17L15C9J2P7 530 aa11.86□□□□□ -0.51
PTPRK-205ENST00000368213 USP17L13C9JLJ4 530 aa11.86□□□□□ -0.51
PTPRK-205ENST00000368213 USP17L11C9JVI0 530 aa11.86□□□□□ -0.51
PTPRK-205ENST00000368213 USP17L18D6R9N7 530 aa11.86□□□□□ -0.51
PTPRK-205ENST00000368213 USP17L22D6RA61 530 aa11.86□□□□□ -0.51
PTPRK-205ENST00000368213 USP17L17D6RBQ6 530 aa11.86□□□□□ -0.51
PTPRK-205ENST00000368213 USP17L19D6RCP7 530 aa11.86□□□□□ -0.51
PTPRK-205ENST00000368213 USP17L20D6RJB6 530 aa11.86□□□□□ -0.51
PTPRK-205ENST00000368213 XRCC5P13010 732 aaKnown RBP11.86□□□□□ -0.51
PTPRK-205ENST00000368213 GCFC2P16383 781 aaKnown RBP11.86□□□□□ -0.51
PTPRK-205ENST00000368213 USP17L24Q0WX57 530 aa11.86□□□□□ -0.51
PTPRK-205ENST00000368213 TMED8Q6PL24 325 aaPredicted RBP11.86□□□□□ -0.51
PTPRK-205ENST00000368213 PPP1R21Q6ZMI0 780 aa11.86□□□□□ -0.51
PTPRK-205ENST00000368213 MLKLQ8NB16 471 aa11.86□□□□□ -0.51
PTPRK-205ENST00000368213 OSBP2Q969R2 916 aa11.86□□□□□ -0.51
PTPRK-205ENST00000368213 ODF2LQ9ULJ1 636 aa11.86□□□□□ -0.51
PTPRK-205ENST00000368213 IGKV5-2P06315 115 aa11.86□□□□□ -0.51
PTPRK-205ENST00000368213 GABPB2Q8TAK5 448 aaPredicted RBP11.86□□□□□ -0.51
PTPRK-205ENST00000368213 RASGRP4Q8TDF6 673 aa11.86□□□□□ -0.51
PTPRK-205ENST00000368213 TSGA10Q9BZW7 698 aa11.86□□□□□ -0.51
PTPRK-205ENST00000368213 RNF146Q9NTX7 359 aa11.86□□□□□ -0.51
PTPRK-205ENST00000368213 BRPF3Q9ULD4 1205 aa11.86□□□□□ -0.51
PTPRK-205ENST00000368213 ERCC5P28715 1186 aaPredicted RBP11.86□□□□□ -0.51
PTPRK-205ENST00000368213 TTLL4Q14679 1199 aa11.86□□□□□ -0.51
PTPRK-205ENST00000368213 MYSM1Q5VVJ2 828 aa11.86□□□□□ -0.51
PTPRK-205ENST00000368213 MTIF3Q9H2K0 278 aaKnown RBP11.86□□□□□ -0.51
PTPRK-205ENST00000368213 BTBD18B2RXH4 712 aa11.86□□□□□ -0.51
PTPRK-205ENST00000368213 KBTBD13C9JR72 458 aa11.86□□□□□ -0.51
PTPRK-205ENST00000368213 SH3BP5O60239 455 aa11.86□□□□□ -0.51
PTPRK-205ENST00000368213 PTPREP23469 700 aa11.86□□□□□ -0.51
PTPRK-205ENST00000368213 PIK3CAP42336 1068 aa11.86□□□□□ -0.51
PTPRK-205ENST00000368213 RSBN1LQ6PCB5 846 aaPredicted RBP11.86□□□□□ -0.51
PTPRK-205ENST00000368213 GIMAP8Q8ND71 665 aaPredicted RBP11.86□□□□□ -0.51
PTPRK-205ENST00000368213 RMDN3Q96TC7 470 aa11.86□□□□□ -0.51
PTPRK-205ENST00000368213 SNX25Q9H3E2 840 aa11.86□□□□□ -0.51
PTPRK-205ENST00000368213 N4BP1O75113 896 aaKnown RBP11.85□□□□□ -0.51
PTPRK-205ENST00000368213 CYP2E1P05181 493 aaPredicted RBP11.85□□□□□ -0.51
PTPRK-205ENST00000368213 HMGCS2P54868 508 aa11.85□□□□□ -0.51
PTPRK-205ENST00000368213 UBE2SQ16763 222 aa11.85□□□□□ -0.51
PTPRK-205ENST00000368213 RNF26Q9BY78 433 aaPredicted RBP11.85□□□□□ -0.51
PTPRK-205ENST00000368213 SERTAD1Q9UHV2 236 aa11.85□□□□□ -0.51
PTPRK-205ENST00000368213 UQCRHLA0A096LP55 91 aa11.85□□□□□ -0.51
PTPRK-205ENST00000368213 PSMD14O00487 310 aa11.85□□□□□ -0.51
PTPRK-205ENST00000368213 CYP2D6P10635 497 aa11.85□□□□□ -0.51
PTPRK-205ENST00000368213 TBCKQ8TEA7 893 aa11.85□□□□□ -0.51
PTPRK-205ENST00000368213 ESPNB1AK53 854 aa11.85□□□□□ -0.51
PTPRK-205ENST00000368213 LACTBP83111 547 aaPredicted RBP11.85□□□□□ -0.51
PTPRK-205ENST00000368213 TRIM14Q14142 442 aa11.85□□□□□ -0.51
PTPRK-205ENST00000368213 RSRC2Q7L4I2 434 aaKnown RBP11.85□□□□□ -0.51
PTPRK-205ENST00000368213 CEP112Q8N8E3 955 aa11.85□□□□□ -0.51
PTPRK-205ENST00000368213 POLIQ9UNA4 740 aa11.85□□□□□ -0.51
PTPRK-205ENST00000368213 DENND3A2RUS2 1198 aa11.85□□□□□ -0.51
PTPRK-205ENST00000368213 CTAGE15A4D2H0 777 aa11.85□□□□□ -0.51
PTPRK-205ENST00000368213 SLU7O95391 586 aaKnown RBP11.85□□□□□ -0.51
PTPRK-205ENST00000368213 CTAGE8P0CG41 777 aa11.85□□□□□ -0.51
PTPRK-205ENST00000368213 CATSPER4Q7RTX7 472 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms