RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 A0A1W2PQ64 194 aa13.78□□□□□ -0.2
USF1-203ENST00000368021 A0A1W2PQD8 194 aa13.78□□□□□ -0.2
USF1-203ENST00000368021 SMCO2A6NFE2 343 aa13.78□□□□□ -0.2
USF1-203ENST00000368021 UNCXA6NJT0 531 aa13.78□□□□□ -0.2
USF1-203ENST00000368021 TMEM232C9JQI7 657 aa13.78□□□□□ -0.2
USF1-203ENST00000368021 IRF6O14896 467 aa13.78□□□□□ -0.2
USF1-203ENST00000368021 BMP15O95972 392 aa13.78□□□□□ -0.2
USF1-203ENST00000368021 EARS2Q5JPH6 523 aaKnown RBP13.78□□□□□ -0.2
USF1-203ENST00000368021 SYDE2Q5VT97 1194 aa13.78□□□□□ -0.2
USF1-203ENST00000368021 SPICE1Q8N0Z3 855 aa13.78□□□□□ -0.2
USF1-203ENST00000368021 ANP32BQ92688 251 aaKnown RBP13.78□□□□□ -0.2
USF1-203ENST00000368021 NUP88Q99567 741 aaPredicted RBP13.78□□□□□ -0.2
USF1-203ENST00000368021 WBP1LQ9NX94 342 aa13.78□□□□□ -0.2
USF1-203ENST00000368021 PCDHA7Q9UN72 937 aa13.78□□□□□ -0.2
USF1-203ENST00000368021 OTOFQ9HC10 1997 aa13.78□□□□□ -0.2
USF1-203ENST00000368021 TRIM75PA6NK02 468 aa13.78□□□□□ -0.2
USF1-203ENST00000368021 ZBTB48P10074 688 aaPredicted RBP13.78□□□□□ -0.2
USF1-203ENST00000368021 ZSCAN23Q3MJ62 389 aa13.78□□□□□ -0.2
USF1-203ENST00000368021 KIAA1755Q5JYT7 1200 aa13.78□□□□□ -0.2
USF1-203ENST00000368021 NOL9Q5SY16 702 aaKnown RBP13.78□□□□□ -0.2
USF1-203ENST00000368021 ERO1BQ86YB8 467 aa13.78□□□□□ -0.2
USF1-203ENST00000368021 CHURC1Q8WUH1 139 aa13.78□□□□□ -0.2
USF1-203ENST00000368021 WDR18Q9BV38 432 aa13.78□□□□□ -0.2
USF1-203ENST00000368021 GLT8D2Q9H1C3 349 aa13.78□□□□□ -0.2
USF1-203ENST00000368021 PICK1Q9NRD5 415 aa13.78□□□□□ -0.2
USF1-203ENST00000368021 PCDHA6Q9UN73 950 aa13.78□□□□□ -0.2
USF1-203ENST00000368021 PCDHA8Q9Y5H6 950 aa13.78□□□□□ -0.2
USF1-203ENST00000368021 ZHX2Q9Y6X8 837 aa13.78□□□□□ -0.2
USF1-203ENST00000368021 SPDYE5A6NIY4 337 aa13.77□□□□□ -0.21
USF1-203ENST00000368021 PPP1R11O60927 126 aaPredicted RBP13.77□□□□□ -0.21
USF1-203ENST00000368021 TRPA1O75762 1119 aa13.77□□□□□ -0.21
USF1-203ENST00000368021 CDC37Q16543 378 aaPredicted RBP13.77□□□□□ -0.21
USF1-203ENST00000368021 QRICH1Q2TAL8 776 aa13.77□□□□□ -0.21
USF1-203ENST00000368021 CCDC183Q5T5S1 534 aa13.77□□□□□ -0.21
USF1-203ENST00000368021 PIK3AP1Q6ZUJ8 805 aa13.77□□□□□ -0.21
USF1-203ENST00000368021 FAM160B2Q86V87 743 aa13.77□□□□□ -0.21
USF1-203ENST00000368021 FEZ1Q99689 392 aa13.77□□□□□ -0.21
USF1-203ENST00000368021 AS3MTQ9HBK9 375 aa13.77□□□□□ -0.21
USF1-203ENST00000368021 PCDHB6Q9Y5E3 794 aa13.77□□□□□ -0.21
USF1-203ENST00000368021 CCDC194A0A1B0GVG4 234 aa13.76□□□□□ -0.21
USF1-203ENST00000368021 FAM205CA6NFA0 338 aa13.76□□□□□ -0.21
USF1-203ENST00000368021 WDR46O15213 610 aaKnown RBP13.76□□□□□ -0.21
USF1-203ENST00000368021 PTPRAP18433 802 aa13.76□□□□□ -0.21
USF1-203ENST00000368021 USP14P54578 494 aa13.76□□□□□ -0.21
USF1-203ENST00000368021 ZNF445P59923 1031 aa13.76□□□□□ -0.21
USF1-203ENST00000368021 TRAF1Q13077 416 aa13.76□□□□□ -0.21
USF1-203ENST00000368021 IKQ13123 557 aaPredicted RBP13.76□□□□□ -0.21
USF1-203ENST00000368021 FAM83BQ5T0W9 1011 aa13.76□□□□□ -0.21
USF1-203ENST00000368021 AXDND1Q5T1B0 1012 aaPredicted RBP13.76□□□□□ -0.21
USF1-203ENST00000368021 KRT25Q7Z3Z0 450 aa13.76□□□□□ -0.21
USF1-203ENST00000368021 TEX2Q8IWB9 1127 aa13.76□□□□□ -0.21
USF1-203ENST00000368021 REXO1Q8N1G1 1221 aaKnown RBP13.76□□□□□ -0.21
USF1-203ENST00000368021 COA7Q96BR5 231 aa13.76□□□□□ -0.21
USF1-203ENST00000368021 RIC8AQ9NPQ8 531 aa13.76□□□□□ -0.21
USF1-203ENST00000368021 FEM1BQ9UK73 627 aa13.76□□□□□ -0.21
USF1-203ENST00000368021 PRR12Q9ULL5 1215 aa13.76□□□□□ -0.21
USF1-203ENST00000368021 ADAMTS3O15072 1205 aa13.76□□□□□ -0.21
USF1-203ENST00000368021 FOXN1O15353 648 aa13.76□□□□□ -0.21
USF1-203ENST00000368021 LIG1P18858 919 aa13.76□□□□□ -0.21
USF1-203ENST00000368021 ADCY7P51828 1080 aa13.76□□□□□ -0.21
USF1-203ENST00000368021 PPATQ06203 517 aa13.76□□□□□ -0.21
USF1-203ENST00000368021 TTC38Q5R3I4 469 aa13.76□□□□□ -0.21
USF1-203ENST00000368021 AMNQ9BXJ7 453 aa13.76□□□□□ -0.21
USF1-203ENST00000368021 DDX19AQ9NUU7 478 aaKnown RBP13.76□□□□□ -0.21
USF1-203ENST00000368021 LETM1O95202 739 aaPredicted RBP13.75□□□□□ -0.21
USF1-203ENST00000368021 CMA1P23946 247 aa13.75□□□□□ -0.21
USF1-203ENST00000368021 MARCKSP29966 332 aaPredicted RBP13.75□□□□□ -0.21
USF1-203ENST00000368021 MRPL12P52815 198 aaKnown RBP13.75□□□□□ -0.21
USF1-203ENST00000368021 BACE1P56817 501 aa13.75□□□□□ -0.21
USF1-203ENST00000368021 SREBF2Q12772 1141 aa13.75□□□□□ -0.21
USF1-203ENST00000368021 NOM1Q5C9Z4 860 aaKnown RBP13.75□□□□□ -0.21
USF1-203ENST00000368021 CCAR1Q8IX12 1150 aaKnown RBP13.75□□□□□ -0.21
USF1-203ENST00000368021 KRI1Q8N9T8 703 aaKnown RBP13.75□□□□□ -0.21
USF1-203ENST00000368021 ZNF280CQ8ND82 737 aa13.75□□□□□ -0.21
USF1-203ENST00000368021 RASGRP4Q8TDF6 673 aa13.75□□□□□ -0.21
USF1-203ENST00000368021 MRPS27Q92552 414 aaKnown RBP13.75□□□□□ -0.21
USF1-203ENST00000368021 CUL5Q93034 780 aa13.75□□□□□ -0.21
USF1-203ENST00000368021 MS4A4AQ96JQ5 239 aa13.75□□□□□ -0.21
USF1-203ENST00000368021 GTPBP4Q9BZE4 634 aaKnown RBP13.75□□□□□ -0.21
USF1-203ENST00000368021 PCDHA1Q9Y5I3 950 aa13.75□□□□□ -0.21
USF1-203ENST00000368021 CCL15-CCL14A0A0B4J2E2 113 aa13.74□□□□□ -0.21
USF1-203ENST00000368021 MANSC4A6NHS7 340 aaPredicted RBP13.74□□□□□ -0.21
USF1-203ENST00000368021 CUTAO60888 179 aa13.74□□□□□ -0.21
USF1-203ENST00000368021 PTPREP23469 700 aa13.74□□□□□ -0.21
USF1-203ENST00000368021 FAM160A1Q05DH4 1040 aa13.74□□□□□ -0.21
USF1-203ENST00000368021 ZYXQ15942 572 aaKnown RBP13.74□□□□□ -0.21
USF1-203ENST00000368021 CCL15Q16663 113 aa13.74□□□□□ -0.21
USF1-203ENST00000368021 CCDC73Q6ZRK6 1079 aa13.74□□□□□ -0.21
USF1-203ENST00000368021 FBXO11Q86XK2 927 aa13.74□□□□□ -0.21
USF1-203ENST00000368021 PTPN18Q99952 460 aa13.74□□□□□ -0.21
USF1-203ENST00000368021 RNF186Q9NXI6 227 aa13.74□□□□□ -0.21
USF1-203ENST00000368021 DACT1Q9NYF0 836 aa13.74□□□□□ -0.21
USF1-203ENST00000368021 PHIPQ8WWQ0 1821 aa13.74□□□□□ -0.21
USF1-203ENST00000368021 IGF2BP3O00425 579 aaKnown RBP eCLIP13.74□□□□□ -0.21
USF1-203ENST00000368021 NR1I2O75469 434 aa13.74□□□□□ -0.21
USF1-203ENST00000368021 TM4SF4P48230 202 aa13.74□□□□□ -0.21
USF1-203ENST00000368021 CLK2P49760 499 aaKnown RBP13.74□□□□□ -0.21
USF1-203ENST00000368021 GTF2A2P52657 109 aa13.74□□□□□ -0.21
USF1-203ENST00000368021 PPIL2Q13356 520 aa13.74□□□□□ -0.21
USF1-203ENST00000368021 ORC2Q13416 577 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms