RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 DACH2Q96NX9 599 aa10.1□□□□□ -0.79
VPS13A-203ENST00000360280 NLRC4Q9NPP4 1024 aa10.1□□□□□ -0.79
VPS13A-203ENST00000360280 ZNF148Q9UQR1 794 aa10.1□□□□□ -0.79
VPS13A-203ENST00000360280 ESRRAP11474 423 aaPredicted RBP10.1□□□□□ -0.79
VPS13A-203ENST00000360280 NEUROG2Q9H2A3 272 aa10.1□□□□□ -0.79
VPS13A-203ENST00000360280 C4orf50Q6ZRC1 276 aa10.1□□□□□ -0.79
VPS13A-203ENST00000360280 OR9Q1Q8NGQ5 310 aa10.1□□□□□ -0.79
VPS13A-203ENST00000360280 DIABLOQ9NR28 239 aa10.1□□□□□ -0.79
VPS13A-203ENST00000360280 GRAMD1BQ3KR37 738 aa10.1□□□□□ -0.79
VPS13A-203ENST00000360280 SESTD1Q86VW0 696 aa10.1□□□□□ -0.79
VPS13A-203ENST00000360280 OLA1Q9NTK5 396 aaKnown RBP10.1□□□□□ -0.79
VPS13A-203ENST00000360280 ARMCX3Q9UH62 379 aaPredicted RBP10.1□□□□□ -0.79
VPS13A-203ENST00000360280 THOC2Q8NI27 1593 aaKnown RBP10.1□□□□□ -0.79
VPS13A-203ENST00000360280 CDC25BP30305 580 aa10.1□□□□□ -0.79
VPS13A-203ENST00000360280 WAPLQ7Z5K2 1190 aa10.1□□□□□ -0.79
VPS13A-203ENST00000360280 PLEKHM2Q8IWE5 1019 aa10.1□□□□□ -0.79
VPS13A-203ENST00000360280 PSMD7P51665 324 aa10.09□□□□□ -0.79
VPS13A-203ENST00000360280 TTBK2Q6IQ55 1244 aa10.09□□□□□ -0.79
VPS13A-203ENST00000360280 CAPN12Q6ZSI9 719 aa10.09□□□□□ -0.79
VPS13A-203ENST00000360280 FAM81BQ96LP2 452 aa10.09□□□□□ -0.79
VPS13A-203ENST00000360280 MED10Q9BTT4 135 aa10.09□□□□□ -0.79
VPS13A-203ENST00000360280 KIAA1468Q9P260 1216 aa10.09□□□□□ -0.79
VPS13A-203ENST00000360280 MRPS15P82914 257 aaKnown RBP10.09□□□□□ -0.79
VPS13A-203ENST00000360280 TEDDM1Q5T9Z0 273 aa10.09□□□□□ -0.79
VPS13A-203ENST00000360280 EP400NLQ6ZTU2 488 aa10.09□□□□□ -0.79
VPS13A-203ENST00000360280 MAML1Q92585 1016 aa10.09□□□□□ -0.79
VPS13A-203ENST00000360280 GPCPD1Q9NPB8 672 aa10.09□□□□□ -0.79
VPS13A-203ENST00000360280 ARHGAP26Q9UNA1 814 aa10.09□□□□□ -0.79
VPS13A-203ENST00000360280 DMP1Q13316 513 aaPredicted RBP10.09□□□□□ -0.79
VPS13A-203ENST00000360280 ARHGAP18Q8N392 663 aa10.09□□□□□ -0.79
VPS13A-203ENST00000360280 LRRC37BQ96QE4 947 aa10.09□□□□□ -0.79
VPS13A-203ENST00000360280 WARS2Q9UGM6 360 aaKnown RBP10.09□□□□□ -0.79
VPS13A-203ENST00000360280 ARHGAP10A1A4S6 786 aa10.09□□□□□ -0.79
VPS13A-203ENST00000360280 ALS2CLQ60I27 953 aa10.09□□□□□ -0.79
VPS13A-203ENST00000360280 MYOCDQ8IZQ8 938 aa10.09□□□□□ -0.79
VPS13A-203ENST00000360280 DTNBP1Q96EV8 351 aa10.09□□□□□ -0.79
VPS13A-203ENST00000360280 ZRANB2O95218 330 aaKnown RBP eCLIP10.09□□□□□ -0.793e-7■■■■■ 46.6
VPS13A-203ENST00000360280 TBCCQ15814 346 aa10.09□□□□□ -0.79
VPS13A-203ENST00000360280 AOC3Q16853 763 aa10.09□□□□□ -0.79
VPS13A-203ENST00000360280 NME9Q86XW9 330 aa10.09□□□□□ -0.79
VPS13A-203ENST00000360280 WASLO00401 505 aaPredicted RBP10.09□□□□□ -0.79
VPS13A-203ENST00000360280 BUB1O43683 1085 aa10.09□□□□□ -0.79
VPS13A-203ENST00000360280 PPARGP37231 505 aaPredicted RBP10.09□□□□□ -0.79
VPS13A-203ENST00000360280 PAIP2BQ9ULR5 123 aaKnown RBP10.09□□□□□ -0.79
VPS13A-203ENST00000360280 HNRNPCP07910 306 aaKnown RBP eCLIP10.09□□□□□ -0.79
VPS13A-203ENST00000360280 SSH2Q76I76 1423 aa10.09□□□□□ -0.79
VPS13A-203ENST00000360280 CUL1Q13616 776 aa10.09□□□□□ -0.79
VPS13A-203ENST00000360280 TMED2Q15363 201 aa10.09□□□□□ -0.79
VPS13A-203ENST00000360280 C10orf76Q5T2E6 689 aa10.09□□□□□ -0.79
VPS13A-203ENST00000360280 SCYL2Q6P3W7 929 aa10.09□□□□□ -0.79
VPS13A-203ENST00000360280 XAGE3Q8WTP9 111 aa10.09□□□□□ -0.79
VPS13A-203ENST00000360280 MAGEF1Q9HAY2 307 aa10.09□□□□□ -0.79
VPS13A-203ENST00000360280 SUN2Q9UH99 717 aa10.09□□□□□ -0.79
VPS13A-203ENST00000360280 MAGI1Q96QZ7 1491 aaPredicted RBP10.09□□□□□ -0.79
VPS13A-203ENST00000360280 EXOC1LA0A1B0GW35 172 aa10.09□□□□□ -0.79
VPS13A-203ENST00000360280 CCDC151A5D8V7 595 aa10.09□□□□□ -0.79
VPS13A-203ENST00000360280 GRIN1Q05586 938 aa10.09□□□□□ -0.79
VPS13A-203ENST00000360280 FAM96AQ9H5X1 160 aa10.09□□□□□ -0.79
VPS13A-203ENST00000360280 BICC1Q9H694 974 aaKnown RBP10.09□□□□□ -0.79
VPS13A-203ENST00000360280 FAM95CA0A1B0GW59 222 aa10.09□□□□□ -0.79
VPS13A-203ENST00000360280 TADA3O75528 432 aa10.09□□□□□ -0.79
VPS13A-203ENST00000360280 AP2B1P63010 937 aa10.09□□□□□ -0.79
VPS13A-203ENST00000360280 TSTA3Q13630 321 aaPredicted RBP10.09□□□□□ -0.79
VPS13A-203ENST00000360280 PLEKHA4Q9H4M7 779 aa10.09□□□□□ -0.79
VPS13A-203ENST00000360280 RRAGDQ9NQL2 400 aaPredicted RBP10.09□□□□□ -0.79
VPS13A-203ENST00000360280 HSPA6P17066 643 aa10.09□□□□□ -0.79
VPS13A-203ENST00000360280 C16orf71Q8IYS4 520 aaPredicted RBP10.09□□□□□ -0.79
VPS13A-203ENST00000360280 NAF1Q96HR8 494 aaKnown RBP10.09□□□□□ -0.79
VPS13A-203ENST00000360280 GSDMAQ96QA5 445 aa10.09□□□□□ -0.79
VPS13A-203ENST00000360280 GINS2Q9Y248 185 aa10.09□□□□□ -0.79
VPS13A-203ENST00000360280 MDM2Q00987 491 aaPredicted RBP10.08□□□□□ -0.8
VPS13A-203ENST00000360280 ADCY2Q08462 1091 aa10.08□□□□□ -0.8
VPS13A-203ENST00000360280 TPTE2Q6XPS3 522 aa10.08□□□□□ -0.8
VPS13A-203ENST00000360280 TRIM33Q9UPN9 1127 aa10.08□□□□□ -0.8
VPS13A-203ENST00000360280 HLA-DPA1P20036 260 aa10.08□□□□□ -0.8
VPS13A-203ENST00000360280 BPIFB4P59827 614 aa10.08□□□□□ -0.8
VPS13A-203ENST00000360280 TFCP2Q12800 502 aa10.08□□□□□ -0.8
VPS13A-203ENST00000360280 IPO5O00410 1097 aaKnown RBP10.08□□□□□ -0.8
VPS13A-203ENST00000360280 ABCD1P33897 745 aa10.08□□□□□ -0.8
VPS13A-203ENST00000360280 FMO2Q99518 471 aa10.08□□□□□ -0.8
VPS13A-203ENST00000360280 TLK1Q9UKI8 766 aa10.08□□□□□ -0.8
VPS13A-203ENST00000360280 PCDHB15Q9Y5E8 787 aa10.08□□□□□ -0.8
VPS13A-203ENST00000360280 ADGRL1O94910 1474 aa10.08□□□□□ -0.8
VPS13A-203ENST00000360280 CHGBP05060 677 aa10.08□□□□□ -0.8
VPS13A-203ENST00000360280 PIK3CAP42336 1068 aa10.08□□□□□ -0.8
VPS13A-203ENST00000360280 TMEM60Q9H2L4 133 aa10.08□□□□□ -0.8
VPS13A-203ENST00000360280 DDX39AO00148 427 aaKnown RBP10.08□□□□□ -0.8
VPS13A-203ENST00000360280 STX19Q8N4C7 294 aa10.08□□□□□ -0.8
VPS13A-203ENST00000360280 MAP3K5Q99683 1374 aa10.08□□□□□ -0.8
VPS13A-203ENST00000360280 DYMQ7RTS9 669 aa10.08□□□□□ -0.8
VPS13A-203ENST00000360280 DIS3L2Q8IYB7 885 aaKnown RBP10.08□□□□□ -0.8
VPS13A-203ENST00000360280 MCUQ8NE86 351 aa10.08□□□□□ -0.8
VPS13A-203ENST00000360280 LINS1Q8NG48 757 aa10.08□□□□□ -0.8
VPS13A-203ENST00000360280 PGRMC1O00264 195 aaKnown RBP10.08□□□□□ -0.8
VPS13A-203ENST00000360280 NCF2P19878 526 aaPredicted RBP10.08□□□□□ -0.8
VPS13A-203ENST00000360280 DAB2P98082 770 aa10.08□□□□□ -0.8
VPS13A-203ENST00000360280 KAZNQ674X7 775 aa10.08□□□□□ -0.8
VPS13A-203ENST00000360280 PCGF5Q86SE9 256 aa10.08□□□□□ -0.8
VPS13A-203ENST00000360280 SLC27A2O14975 620 aa10.08□□□□□ -0.8
VPS13A-203ENST00000360280 MBD4O95243 580 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 161.5 ms