RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 EXOC8Q8IYI6 725 aa25.28■■□□□ 1.64
NPAS3-201ENST00000346562 ATF2P15336 505 aa25.28■■□□□ 1.64
NPAS3-201ENST00000346562 RETREG2Q8NC44 543 aa25.28■■□□□ 1.64
NPAS3-201ENST00000346562 RABGAP1Q9Y3P9 1069 aa25.28■■□□□ 1.64
NPAS3-201ENST00000346562 PHKG2P15735 406 aa25.28■■□□□ 1.64
NPAS3-201ENST00000346562 LONP1P36776 959 aaKnown RBP25.28■■□□□ 1.64
NPAS3-201ENST00000346562 BCAMP50895 628 aa25.28■■□□□ 1.64
NPAS3-201ENST00000346562 MFAP3P55082 362 aa25.28■■□□□ 1.64
NPAS3-201ENST00000346562 NLGN1Q8N2Q7 840 aa25.28■■□□□ 1.64
NPAS3-201ENST00000346562 ANKRD36BP1Q96IX9 119 aa25.28■■□□□ 1.64
NPAS3-201ENST00000346562 EIF3CLB5ME19 914 aaKnown RBP25.27■■□□□ 1.64
NPAS3-201ENST00000346562 BPIFB4P59827 614 aa25.27■■□□□ 1.64
NPAS3-201ENST00000346562 SKA2Q8WVK7 121 aaPredicted RBP25.27■■□□□ 1.64
NPAS3-201ENST00000346562 EIF3CQ99613 913 aaKnown RBP25.27■■□□□ 1.64
NPAS3-201ENST00000346562 SDR42E1Q8WUS8 393 aa25.27■■□□□ 1.64
NPAS3-201ENST00000346562 HOMER3Q9NSC5 361 aa25.27■■□□□ 1.64
NPAS3-201ENST00000346562 PTPRKQ15262 1439 aa25.27■■□□□ 1.64
NPAS3-201ENST00000346562 NPC1L1Q9UHC9 1359 aa25.27■■□□□ 1.64
NPAS3-201ENST00000346562 MYL7Q01449 175 aa25.27■■□□□ 1.64
NPAS3-201ENST00000346562 TRIM35Q9UPQ4 493 aa25.27■■□□□ 1.64
NPAS3-201ENST00000346562 ADAM9Q13443 819 aa25.27■■□□□ 1.64
NPAS3-201ENST00000346562 PPM1KQ8N3J5 372 aa25.27■■□□□ 1.64
NPAS3-201ENST00000346562 TSC1Q92574 1164 aa25.27■■□□□ 1.64
NPAS3-201ENST00000346562 SEPT9Q9UHD8 586 aaPredicted RBP25.27■■□□□ 1.64
NPAS3-201ENST00000346562 ZNF853P0CG23 659 aa25.27■■□□□ 1.64
NPAS3-201ENST00000346562 IFT122Q9HBG6 1241 aa25.27■■□□□ 1.64
NPAS3-201ENST00000346562 SEMA3EO15041 775 aa25.26■■□□□ 1.63
NPAS3-201ENST00000346562 CCDC38Q502W7 563 aa25.26■■□□□ 1.63
NPAS3-201ENST00000346562 POMGNT1Q8WZA1 660 aa25.26■■□□□ 1.63
NPAS3-201ENST00000346562 GPKOWQ92917 476 aaPredicted RBP eCLIP25.26■■□□□ 1.63
NPAS3-201ENST00000346562 ATP6V0A1Q93050 837 aa25.26■■□□□ 1.63
NPAS3-201ENST00000346562 BAG5Q9UL15 447 aa25.26■■□□□ 1.63
NPAS3-201ENST00000346562 XDHP47989 1333 aa25.26■■□□□ 1.63
NPAS3-201ENST00000346562 PFKFB2O60825 505 aa25.26■■□□□ 1.63
NPAS3-201ENST00000346562 ARHGAP4P98171 946 aa25.26■■□□□ 1.63
NPAS3-201ENST00000346562 PNMA8AQ86V59 439 aaPredicted RBP25.26■■□□□ 1.63
NPAS3-201ENST00000346562 KLHL14Q9P2G3 628 aa25.26■■□□□ 1.63
NPAS3-201ENST00000346562 NUB1Q9Y5A7 615 aa25.26■■□□□ 1.63
NPAS3-201ENST00000346562 ERBB4Q15303 1308 aa25.26■■□□□ 1.63
NPAS3-201ENST00000346562 GOLGA8HP0CJ92 632 aa25.26■■□□□ 1.63
NPAS3-201ENST00000346562 ADKP55263 362 aaKnown RBP25.26■■□□□ 1.63
NPAS3-201ENST00000346562 JADE1Q6IE81 842 aa25.26■■□□□ 1.63
NPAS3-201ENST00000346562 MIS18BP1Q6P0N0 1132 aa25.26■■□□□ 1.63
NPAS3-201ENST00000346562 SOS2Q07890 1332 aaPredicted RBP25.26■■□□□ 1.63
NPAS3-201ENST00000346562 CMTR1Q8N1G2 835 aaKnown RBP25.26■■□□□ 1.63
NPAS3-201ENST00000346562 XPO4Q9C0E2 1151 aaKnown RBP25.26■■□□□ 1.63
NPAS3-201ENST00000346562 RPN1P04843 607 aaKnown RBP25.25■■□□□ 1.63
NPAS3-201ENST00000346562 ATP10DQ9P241 1426 aa25.25■■□□□ 1.63
NPAS3-201ENST00000346562 GOLGA8KD6RF30 607 aa25.25■■□□□ 1.63
NPAS3-201ENST00000346562 THAP12O43422 761 aa25.25■■□□□ 1.63
NPAS3-201ENST00000346562 POLR2FP61218 127 aaKnown RBP25.25■■□□□ 1.63
NPAS3-201ENST00000346562 FAM71BQ8TC56 605 aa25.25■■□□□ 1.63
NPAS3-201ENST00000346562 ZNF804BA4D1E1 1349 aa25.25■■□□□ 1.63
NPAS3-201ENST00000346562 GADD45BO75293 160 aaPredicted RBP25.25■■□□□ 1.63
NPAS3-201ENST00000346562 ME3Q16798 604 aa25.25■■□□□ 1.63
NPAS3-201ENST00000346562 DISC1Q9NRI5 854 aa25.25■■□□□ 1.63
NPAS3-201ENST00000346562 PRKAG2Q9UGJ0 569 aa25.25■■□□□ 1.63
NPAS3-201ENST00000346562 MAPKBP1O60336 1514 aa25.25■■□□□ 1.63
NPAS3-201ENST00000346562 ARHGAP42A6NI28 874 aa25.25■■□□□ 1.63
NPAS3-201ENST00000346562 LAD1O00515 517 aa25.25■■□□□ 1.63
NPAS3-201ENST00000346562 GUCY2FP51841 1108 aa25.25■■□□□ 1.63
NPAS3-201ENST00000346562 ZNF449Q6P9G9 518 aa25.25■■□□□ 1.63
NPAS3-201ENST00000346562 AKT3Q9Y243 479 aa25.25■■□□□ 1.63
NPAS3-201ENST00000346562 TMC4Q7Z404 712 aa25.24■■□□□ 1.63
NPAS3-201ENST00000346562 TRIM11Q96F44 468 aa25.24■■□□□ 1.63
NPAS3-201ENST00000346562 CCDC17Q96LX7 622 aa25.24■■□□□ 1.63
NPAS3-201ENST00000346562 PTK2Q05397 1052 aa25.24■■□□□ 1.63
NPAS3-201ENST00000346562 APOL6Q9BWW8 343 aa25.24■■□□□ 1.63
NPAS3-201ENST00000346562 KIAA1468Q9P260 1216 aa25.24■■□□□ 1.63
NPAS3-201ENST00000346562 SYNJ2BP-COX16A0A087WUM0 186 aa25.24■■□□□ 1.63
NPAS3-201ENST00000346562 ABCD1P33897 745 aa25.24■■□□□ 1.63
NPAS3-201ENST00000346562 ECE1P42892 770 aa25.24■■□□□ 1.63
NPAS3-201ENST00000346562 ASPRV1Q53RT3 343 aa25.24■■□□□ 1.63
NPAS3-201ENST00000346562 HDAC11Q96DB2 347 aa25.24■■□□□ 1.63
NPAS3-201ENST00000346562 AMNQ9BXJ7 453 aa25.24■■□□□ 1.63
NPAS3-201ENST00000346562 COX16Q9P0S2 106 aa25.24■■□□□ 1.63
NPAS3-201ENST00000346562 RFC1P35251 1148 aaPredicted RBP25.24■■□□□ 1.63
NPAS3-201ENST00000346562 ZNF445P59923 1031 aa25.24■■□□□ 1.63
NPAS3-201ENST00000346562 TTLL7Q6ZT98 887 aa25.24■■□□□ 1.63
NPAS3-201ENST00000346562 RAB44Q7Z6P3 723 aaPredicted RBP25.24■■□□□ 1.63
NPAS3-201ENST00000346562 ATP8B3O60423 1300 aa25.24■■□□□ 1.63
NPAS3-201ENST00000346562 KRT10P13645 584 aa25.24■■□□□ 1.63
NPAS3-201ENST00000346562 DDX17Q92841 729 aaKnown RBP25.24■■□□□ 1.63
NPAS3-201ENST00000346562 FAM26FQ5R3K3 315 aa25.23■■□□□ 1.63
NPAS3-201ENST00000346562 RFX6Q8HWS3 928 aa25.23■■□□□ 1.63
NPAS3-201ENST00000346562 ADD3Q9UEY8 706 aaKnown RBP25.23■■□□□ 1.63
NPAS3-201ENST00000346562 PCDHA1Q9Y5I3 950 aa25.23■■□□□ 1.63
NPAS3-201ENST00000346562 H7C0C1 242 aa25.23■■□□□ 1.63
NPAS3-201ENST00000346562 BUB1O43683 1085 aa25.23■■□□□ 1.63
NPAS3-201ENST00000346562 ATP5OP48047 213 aa25.23■■□□□ 1.63
NPAS3-201ENST00000346562 MAP3K15Q6ZN16 1313 aa25.23■■□□□ 1.63
NPAS3-201ENST00000346562 EFCC1Q9HA90 598 aa25.23■■□□□ 1.63
NPAS3-201ENST00000346562 FAM8A1Q9UBU6 413 aa25.23■■□□□ 1.63
NPAS3-201ENST00000346562 DNAJC5BQ9UF47 199 aa25.23■■□□□ 1.63
NPAS3-201ENST00000346562 CLNS1AP54105 237 aaKnown RBP25.23■■□□□ 1.63
NPAS3-201ENST00000346562 LMNB2Q03252 620 aa25.23■■□□□ 1.63
NPAS3-201ENST00000346562 CCDC127Q96BQ5 260 aa25.23■■□□□ 1.63
NPAS3-201ENST00000346562 PASKQ96RG2 1323 aa25.22■■□□□ 1.63
NPAS3-201ENST00000346562 GOLGA8QA0A0J9YX86 632 aa25.22■■□□□ 1.63
NPAS3-201ENST00000346562 GOLGA8OA6NCC3 632 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms