RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 TRIM29Q14134 588 aa20.59■□□□□ 0.89
SDCBP2-201ENST00000339987 PLS1Q14651 629 aa20.59■□□□□ 0.89
SDCBP2-201ENST00000339987 FAM110CQ1W6H9 321 aa20.59■□□□□ 0.89
SDCBP2-201ENST00000339987 LARP1BQ659C4 914 aaKnown RBP20.59■□□□□ 0.89
SDCBP2-201ENST00000339987 TEX2Q8IWB9 1127 aa20.59■□□□□ 0.89
SDCBP2-201ENST00000339987 GPRC5AQ8NFJ5 357 aa20.59■□□□□ 0.89
SDCBP2-201ENST00000339987 FBXO18Q8NFZ0 1043 aa20.59■□□□□ 0.89
SDCBP2-201ENST00000339987 CFHR5Q9BXR6 569 aa20.59■□□□□ 0.89
SDCBP2-201ENST00000339987 SLC25A27O95847 323 aa20.58■□□□□ 0.88
SDCBP2-201ENST00000339987 BCRP11274 1271 aa20.58■□□□□ 0.88
SDCBP2-201ENST00000339987 CRHR2Q13324 411 aa20.58■□□□□ 0.88
SDCBP2-201ENST00000339987 KRT40Q6A162 431 aa20.58■□□□□ 0.88
SDCBP2-201ENST00000339987 ANKRD13CQ8N6S4 541 aa20.58■□□□□ 0.88
SDCBP2-201ENST00000339987 SHCBP1Q8NEM2 672 aa20.58■□□□□ 0.88
SDCBP2-201ENST00000339987 PHF20Q9BVI0 1012 aa20.58■□□□□ 0.88
SDCBP2-201ENST00000339987 MAF1Q9H063 256 aa20.58■□□□□ 0.88
SDCBP2-201ENST00000339987 ZMYND12Q9H0C1 365 aa20.58■□□□□ 0.88
SDCBP2-201ENST00000339987 PEX10O60683 326 aa20.57■□□□□ 0.88
SDCBP2-201ENST00000339987 ALAS1P13196 640 aa20.57■□□□□ 0.88
SDCBP2-201ENST00000339987 SYT1P21579 422 aa20.57■□□□□ 0.88
SDCBP2-201ENST00000339987 CALML3P27482 149 aa20.57■□□□□ 0.88
SDCBP2-201ENST00000339987 DDIT3P35638 169 aa20.57■□□□□ 0.88
SDCBP2-201ENST00000339987 CCNA1P78396 465 aa20.57■□□□□ 0.88
SDCBP2-201ENST00000339987 GALNT17Q6IS24 598 aa20.57■□□□□ 0.88
SDCBP2-201ENST00000339987 C17orf99Q6UX52 265 aa20.57■□□□□ 0.88
SDCBP2-201ENST00000339987 MOV10L1Q9BXT6 1211 aaKnown RBP20.57■□□□□ 0.88
SDCBP2-201ENST00000339987 GLT8D2Q9H1C3 349 aa20.57■□□□□ 0.88
SDCBP2-201ENST00000339987 GJB4Q9NTQ9 266 aa20.57■□□□□ 0.88
SDCBP2-201ENST00000339987 RNF146Q9NTX7 359 aa20.57■□□□□ 0.88
SDCBP2-201ENST00000339987 RIPK3Q9Y572 518 aa20.57■□□□□ 0.88
SDCBP2-201ENST00000339987 SMCHD1A6NHR9 2005 aa20.56■□□□□ 0.88
SDCBP2-201ENST00000339987 TAL1P17542 331 aaPredicted RBP20.56■□□□□ 0.88
SDCBP2-201ENST00000339987 FOSBP53539 338 aa20.56■□□□□ 0.88
SDCBP2-201ENST00000339987 NLRP5P59047 1200 aa20.56■□□□□ 0.88
SDCBP2-201ENST00000339987 Q3C1V9 767 aa20.56■□□□□ 0.88
SDCBP2-201ENST00000339987 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.56■□□□□ 0.88
SDCBP2-201ENST00000339987 DAGLBQ8NCG7 672 aa20.56■□□□□ 0.88
SDCBP2-201ENST00000339987 CHST13Q8NET6 341 aa20.56■□□□□ 0.88
SDCBP2-201ENST00000339987 CLEC4DQ8WXI8 215 aa20.56■□□□□ 0.88
SDCBP2-201ENST00000339987 TRERF1Q96PN7 1200 aa20.56■□□□□ 0.88
SDCBP2-201ENST00000339987 C6orf50Q9HD87 102 aa20.56■□□□□ 0.88
SDCBP2-201ENST00000339987 RIC8AQ9NPQ8 531 aa20.56■□□□□ 0.88
SDCBP2-201ENST00000339987 FBXO40Q9UH90 709 aa20.56■□□□□ 0.88
SDCBP2-201ENST00000339987 CPA4Q9UI42 421 aa20.56■□□□□ 0.88
SDCBP2-201ENST00000339987 KCNJ14Q9UNX9 436 aa20.56■□□□□ 0.88
SDCBP2-201ENST00000339987 SMCO2A6NFE2 343 aa20.55■□□□□ 0.88
SDCBP2-201ENST00000339987 OPLAHO14841 1288 aa20.55■□□□□ 0.88
SDCBP2-201ENST00000339987 MMP1P03956 469 aa20.55■□□□□ 0.88
SDCBP2-201ENST00000339987 GNA11P29992 359 aa20.55■□□□□ 0.88
SDCBP2-201ENST00000339987 ADCY7P51828 1080 aa20.55■□□□□ 0.88
SDCBP2-201ENST00000339987 GHRHRQ02643 423 aa20.55■□□□□ 0.88
SDCBP2-201ENST00000339987 NPY5RQ15761 445 aa20.55■□□□□ 0.88
SDCBP2-201ENST00000339987 SAMD3Q8N6K7 520 aa20.55■□□□□ 0.88
SDCBP2-201ENST00000339987 ACAD9Q9H845 621 aa20.55■□□□□ 0.88
SDCBP2-201ENST00000339987 RNF186Q9NXI6 227 aa20.55■□□□□ 0.88
SDCBP2-201ENST00000339987 H3BQV1 296 aa20.54■□□□□ 0.88
SDCBP2-201ENST00000339987 STX6O43752 255 aa20.54■□□□□ 0.88
SDCBP2-201ENST00000339987 MRPL12P52815 198 aaKnown RBP20.54■□□□□ 0.88
SDCBP2-201ENST00000339987 GUCY1B3Q02153 619 aa20.54■□□□□ 0.88
SDCBP2-201ENST00000339987 MUM1L1Q5H9M0 696 aa20.54■□□□□ 0.88
SDCBP2-201ENST00000339987 MCF2L2Q86YR7 1114 aa20.54■□□□□ 0.88
SDCBP2-201ENST00000339987 BICD2Q8TD16 824 aa20.54■□□□□ 0.88
SDCBP2-201ENST00000339987 CUL5Q93034 780 aa20.54■□□□□ 0.88
SDCBP2-201ENST00000339987 MROH8Q9H579 483 aa20.54■□□□□ 0.88
SDCBP2-201ENST00000339987 PSTPIP2Q9H939 334 aa20.54■□□□□ 0.88
SDCBP2-201ENST00000339987 SAGE1Q9NXZ1 904 aa20.54■□□□□ 0.88
SDCBP2-201ENST00000339987 PCDHA4Q9UN74 947 aa20.54■□□□□ 0.88
SDCBP2-201ENST00000339987 ERCC3P19447 782 aa20.53■□□□□ 0.88
SDCBP2-201ENST00000339987 SAFBQ15424 915 aaKnown RBP eCLIP20.53■□□□□ 0.88
SDCBP2-201ENST00000339987 RBBP6Q7Z6E9 1792 aaKnown RBP20.53■□□□□ 0.88
SDCBP2-201ENST00000339987 DNAJC5GQ8N7S2 189 aa20.53■□□□□ 0.88
SDCBP2-201ENST00000339987 BRMS1Q9HCU9 246 aa20.53■□□□□ 0.88
SDCBP2-201ENST00000339987 HOMER2Q9NSB8 354 aa20.53■□□□□ 0.88
SDCBP2-201ENST00000339987 MAP3K20Q9NYL2 800 aaKnown RBP20.53■□□□□ 0.88
SDCBP2-201ENST00000339987 CIZ1Q9ULV3 898 aaPredicted RBP20.53■□□□□ 0.88
SDCBP2-201ENST00000339987 VPS37CA5D8V6 355 aaPredicted RBP20.53■□□□□ 0.88
SDCBP2-201ENST00000339987 PIK3CDO00329 1044 aa20.53■□□□□ 0.88
SDCBP2-201ENST00000339987 NFIBO00712 420 aa20.53■□□□□ 0.88
SDCBP2-201ENST00000339987 MAP2K1Q02750 393 aaPredicted RBP20.53■□□□□ 0.88
SDCBP2-201ENST00000339987 NCAPG2Q86XI2 1143 aa20.53■□□□□ 0.88
SDCBP2-201ENST00000339987 BLIDQ8IZY5 108 aa20.53■□□□□ 0.88
SDCBP2-201ENST00000339987 MTMR6Q9Y217 621 aa20.53■□□□□ 0.88
SDCBP2-201ENST00000339987 TRPA1O75762 1119 aa20.52■□□□□ 0.87
SDCBP2-201ENST00000339987 KRT2P35908 639 aa20.52■□□□□ 0.87
SDCBP2-201ENST00000339987 HSD17B4P51659 736 aa20.52■□□□□ 0.87
SDCBP2-201ENST00000339987 PORCNQ9H237 461 aa20.52■□□□□ 0.87
SDCBP2-201ENST00000339987 R3HDMLQ9H3Y0 253 aa20.52■□□□□ 0.87
SDCBP2-201ENST00000339987 GCOM1H8Y6P7 765 aaPredicted RBP20.51■□□□□ 0.87
SDCBP2-201ENST00000339987 M0R2N6 131 aa20.51■□□□□ 0.87
SDCBP2-201ENST00000339987 MEIS2O14770 477 aa20.51■□□□□ 0.87
SDCBP2-201ENST00000339987 POLR2MP0CAP2 368 aa20.51■□□□□ 0.87
SDCBP2-201ENST00000339987 MAPK4P31152 587 aa20.51■□□□□ 0.87
SDCBP2-201ENST00000339987 MCTP2Q6DN12 878 aa20.51■□□□□ 0.87
SDCBP2-201ENST00000339987 DIS3L2Q8IYB7 885 aaKnown RBP20.51■□□□□ 0.87
SDCBP2-201ENST00000339987 REXO1Q8N1G1 1221 aaKnown RBP20.51■□□□□ 0.87
SDCBP2-201ENST00000339987 FOXP1Q9H334 677 aaPredicted RBP20.51■□□□□ 0.87
SDCBP2-201ENST00000339987 EFCC1Q9HA90 598 aa20.51■□□□□ 0.87
SDCBP2-201ENST00000339987 TBC1D8O95759 1140 aa20.5■□□□□ 0.87
SDCBP2-201ENST00000339987 CFBP00751 764 aa20.5■□□□□ 0.87
SDCBP2-201ENST00000339987 CLK2P49760 499 aaKnown RBP20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms