RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 ARL8AQ96BM9 186 aa6.13□□□□□ -1.43
VPS50-202ENST00000305866 ERGIC2Q96RQ1 377 aa6.13□□□□□ -1.43
VPS50-202ENST00000305866 SELENOOQ9BVL4 669 aa6.13□□□□□ -1.43
VPS50-202ENST00000305866 NACAP1Q9BZK3 213 aa6.13□□□□□ -1.43
VPS50-202ENST00000305866 PLEKHA4Q9H4M7 779 aa6.13□□□□□ -1.43
VPS50-202ENST00000305866 BTG4Q9NY30 223 aa6.13□□□□□ -1.43
VPS50-202ENST00000305866 SLC12A6Q9UHW9 1150 aa6.13□□□□□ -1.43
VPS50-202ENST00000305866 HOOK1Q9UJC3 728 aaKnown RBP6.13□□□□□ -1.43
VPS50-202ENST00000305866 GDAQ9Y2T3 454 aa6.13□□□□□ -1.43
VPS50-202ENST00000305866 PCDHA2Q9Y5H9 948 aa6.13□□□□□ -1.43
VPS50-202ENST00000305866 SLC12A7Q9Y666 1083 aa6.13□□□□□ -1.43
VPS50-202ENST00000305866 ANO9A1A5B4 782 aa6.12□□□□□ -1.43
VPS50-202ENST00000305866 SRRM3A6NNA2 597 aaPredicted RBP6.12□□□□□ -1.43
VPS50-202ENST00000305866 SNAP23O00161 211 aa6.12□□□□□ -1.43
VPS50-202ENST00000305866 EIF3HO15372 352 aaKnown RBP eCLIP6.12□□□□□ -1.43
VPS50-202ENST00000305866 ONECUT3O60422 494 aaPredicted RBP6.12□□□□□ -1.43
VPS50-202ENST00000305866 PLEKP08567 350 aaPredicted RBP6.12□□□□□ -1.43
VPS50-202ENST00000305866 INHBEP58166 350 aa6.12□□□□□ -1.43
VPS50-202ENST00000305866 UAP1Q16222 522 aaPredicted RBP6.12□□□□□ -1.43
VPS50-202ENST00000305866 RTN1Q16799 776 aa6.12□□□□□ -1.43
VPS50-202ENST00000305866 KIAA0895Q8NCT3 520 aa6.12□□□□□ -1.43
VPS50-202ENST00000305866 FAM84BQ96KN1 310 aaPredicted RBP6.12□□□□□ -1.43
VPS50-202ENST00000305866 TLR10Q9BXR5 811 aa6.12□□□□□ -1.43
VPS50-202ENST00000305866 CUEDC2Q9H467 287 aa6.12□□□□□ -1.43
VPS50-202ENST00000305866 BRMS1Q9HCU9 246 aa6.12□□□□□ -1.43
VPS50-202ENST00000305866 ARGLU1Q9NWB6 273 aaPredicted RBP6.12□□□□□ -1.43
VPS50-202ENST00000305866 TRMT112Q9UI30 125 aaKnown RBP6.12□□□□□ -1.43
VPS50-202ENST00000305866 LOC102724428A0A0B4J2F2 783 aa6.12□□□□□ -1.43
VPS50-202ENST00000305866 ESYT2A0FGR8 921 aa6.12□□□□□ -1.43
VPS50-202ENST00000305866 CCDC189A1A4V9 331 aa6.12□□□□□ -1.43
VPS50-202ENST00000305866 C5orf60A6NFR6 353 aa6.12□□□□□ -1.43
VPS50-202ENST00000305866 SIK1P57059 783 aa6.12□□□□□ -1.43
VPS50-202ENST00000305866 KCNMA1Q12791 1236 aa6.12□□□□□ -1.43
VPS50-202ENST00000305866 ECM1Q16610 540 aa6.12□□□□□ -1.43
VPS50-202ENST00000305866 C10orf67Q8IYJ2 551 aa6.12□□□□□ -1.43
VPS50-202ENST00000305866 MAGEB6Q8N7X4 407 aa6.12□□□□□ -1.43
VPS50-202ENST00000305866 AIDAQ96BJ3 306 aa6.12□□□□□ -1.43
VPS50-202ENST00000305866 CEP89Q96ST8 783 aa6.12□□□□□ -1.43
VPS50-202ENST00000305866 CCSER1Q9C0I3 900 aa6.12□□□□□ -1.43
VPS50-202ENST00000305866 IL17RBQ9NRM6 502 aa6.12□□□□□ -1.43
VPS50-202ENST00000305866 ARPP21Q9UBL0 812 aaPredicted RBP6.12□□□□□ -1.43
VPS50-202ENST00000305866 GGA2Q9UJY4 613 aa6.12□□□□□ -1.43
VPS50-202ENST00000305866 MINPP1Q9UNW1 487 aa6.12□□□□□ -1.43
VPS50-202ENST00000305866 POTEB2H3BUK9 544 aa6.12□□□□□ -1.43
VPS50-202ENST00000305866 CYTH3O43739 400 aa6.12□□□□□ -1.43
VPS50-202ENST00000305866 ADAMTS2O95450 1211 aa6.12□□□□□ -1.43
VPS50-202ENST00000305866 FAM153BP0C7A2 387 aa6.12□□□□□ -1.43
VPS50-202ENST00000305866 LONP1P36776 959 aaKnown RBP6.12□□□□□ -1.43
VPS50-202ENST00000305866 MAPK8IP2Q13387 824 aaPredicted RBP6.12□□□□□ -1.43
VPS50-202ENST00000305866 TRIM14Q14142 442 aa6.12□□□□□ -1.43
VPS50-202ENST00000305866 WASHC4Q2M389 1173 aa6.12□□□□□ -1.43
VPS50-202ENST00000305866 FAM153CQ494X1 144 aa6.12□□□□□ -1.43
VPS50-202ENST00000305866 KLHDC7AQ5VTJ3 777 aa6.12□□□□□ -1.43
VPS50-202ENST00000305866 LRRC55Q6ZSA7 311 aa6.12□□□□□ -1.43
VPS50-202ENST00000305866 MICU3Q86XE3 530 aa6.12□□□□□ -1.43
VPS50-202ENST00000305866 ESR2Q92731 530 aa6.12□□□□□ -1.43
VPS50-202ENST00000305866 IQCDQ96DY2 449 aa6.12□□□□□ -1.43
VPS50-202ENST00000305866 SEMA6BQ9H3T3 888 aa6.12□□□□□ -1.43
VPS50-202ENST00000305866 SH2D4AQ9H788 454 aa6.12□□□□□ -1.43
VPS50-202ENST00000305866 FAM153AQ9UHL3 310 aa6.12□□□□□ -1.43
VPS50-202ENST00000305866 SNX12Q9UMY4 172 aa6.12□□□□□ -1.43
VPS50-202ENST00000305866 EPN1Q9Y6I3 576 aaPredicted RBP6.12□□□□□ -1.43
VPS50-202ENST00000305866 TANC1Q9C0D5 1861 aa6.11□□□□□ -1.43
VPS50-202ENST00000305866 CTAGE9A4FU28 777 aa6.11□□□□□ -1.43
VPS50-202ENST00000305866 hCG_1984214I3L0E3 225 aa6.11□□□□□ -1.43
VPS50-202ENST00000305866 PAEPP09466 180 aa6.11□□□□□ -1.43
VPS50-202ENST00000305866 GRM4Q14833 912 aa6.11□□□□□ -1.43
VPS50-202ENST00000305866 WTAPQ15007 396 aa6.11□□□□□ -1.43
VPS50-202ENST00000305866 TRADDQ15628 312 aa6.11□□□□□ -1.43
VPS50-202ENST00000305866 CRY2Q49AN0 593 aa6.11□□□□□ -1.43
VPS50-202ENST00000305866 RRP12Q5JTH9 1297 aaKnown RBP6.11□□□□□ -1.43
VPS50-202ENST00000305866 CYP26C1Q6V0L0 522 aa6.11□□□□□ -1.43
VPS50-202ENST00000305866 TADA2BQ86TJ2 420 aa6.11□□□□□ -1.43
VPS50-202ENST00000305866 CNGA4Q8IV77 575 aa6.11□□□□□ -1.43
VPS50-202ENST00000305866 ZNF713Q8N859 430 aaPredicted RBP6.11□□□□□ -1.43
VPS50-202ENST00000305866 ZBTB9Q96C00 473 aa6.11□□□□□ -1.43
VPS50-202ENST00000305866 INPP4AQ96PE3 977 aaPredicted RBP6.11□□□□□ -1.43
VPS50-202ENST00000305866 CTAGE1Q96RT6 745 aa6.11□□□□□ -1.43
VPS50-202ENST00000305866 SLC26A6Q9BXS9 759 aa6.11□□□□□ -1.43
VPS50-202ENST00000305866 TMEM60Q9H2L4 133 aa6.11□□□□□ -1.43
VPS50-202ENST00000305866 THAP9Q9H5L6 903 aa6.11□□□□□ -1.43
VPS50-202ENST00000305866 CNNM1Q9NRU3 951 aa6.11□□□□□ -1.43
VPS50-202ENST00000305866 COL11A2P13942 1736 aaPredicted RBP6.11□□□□□ -1.43
VPS50-202ENST00000305866 MGAMO43451 1857 aa6.11□□□□□ -1.43
VPS50-202ENST00000305866 IGKV6D-41A0A0C4DH26 115 aa6.11□□□□□ -1.43
VPS50-202ENST00000305866 KCNJ18B7U540 433 aa6.11□□□□□ -1.43
VPS50-202ENST00000305866 ANKRD65E5RJM6 399 aa6.11□□□□□ -1.43
VPS50-202ENST00000305866 ENC1O14682 589 aa6.11□□□□□ -1.43
VPS50-202ENST00000305866 TP73O15350 636 aa6.11□□□□□ -1.43
VPS50-202ENST00000305866 GTPBP6O43824 516 aaPredicted RBP6.11□□□□□ -1.43
VPS50-202ENST00000305866 PARP1P09874 1014 aaKnown RBP6.11□□□□□ -1.43
VPS50-202ENST00000305866 LMAN1P49257 510 aa6.11□□□□□ -1.43
VPS50-202ENST00000305866 ITGB3BPQ13352 177 aaPredicted RBP6.11□□□□□ -1.43
VPS50-202ENST00000305866 SF3B2Q13435 895 aaKnown RBP6.11□□□□□ -1.43
VPS50-202ENST00000305866 KCNJ12Q14500 433 aa6.11□□□□□ -1.43
VPS50-202ENST00000305866 EFCAB13Q8IY85 973 aa6.11□□□□□ -1.43
VPS50-202ENST00000305866 LZTS2Q9BRK4 669 aa6.11□□□□□ -1.43
VPS50-202ENST00000305866 SYT11Q9BT88 431 aa6.11□□□□□ -1.43
VPS50-202ENST00000305866 NAPBQ9H115 298 aa6.11□□□□□ -1.43
VPS50-202ENST00000305866 ADAM7Q9H2U9 754 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms