RNA–Protein interactions for RNA: ENST00000301765.9

VPS37C-201, Transcript of VPS37C, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS37C, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-201ENST00000301765 SEC23AQ15436 765 aa18.75■□□□□ 0.59
VPS37C-201ENST00000301765 NPY5RQ15761 445 aa18.75■□□□□ 0.59
VPS37C-201ENST00000301765 TTC38Q5R3I4 469 aa18.75■□□□□ 0.59
VPS37C-201ENST00000301765 CCNI2Q6ZMN8 369 aaPredicted RBP18.75■□□□□ 0.59
VPS37C-201ENST00000301765 TRAPPC11Q7Z392 1133 aa18.75■□□□□ 0.59
VPS37C-201ENST00000301765 PRPF38AQ8NAV1 312 aaKnown RBP18.75■□□□□ 0.59
VPS37C-201ENST00000301765 TTC26A0AVF1 554 aa18.75■□□□□ 0.59
VPS37C-201ENST00000301765 KRT14P02533 472 aa18.75■□□□□ 0.59
VPS37C-201ENST00000301765 KLK7P49862 253 aa18.75■□□□□ 0.59
VPS37C-201ENST00000301765 ZNF622Q969S3 477 aaKnown RBP eCLIP18.75■□□□□ 0.59
VPS37C-201ENST00000301765 RIOK1Q9BRS2 568 aaKnown RBP18.75■□□□□ 0.59
VPS37C-201ENST00000301765 NACAP1Q9BZK3 213 aa18.75■□□□□ 0.59
VPS37C-201ENST00000301765 EHD2Q9NZN4 543 aa18.75■□□□□ 0.59
VPS37C-201ENST00000301765 DMGDHQ9UI17 866 aaKnown RBP18.75■□□□□ 0.59
VPS37C-201ENST00000301765 PP2D1A8MPX8 630 aa18.75■□□□□ 0.59
VPS37C-201ENST00000301765 NEBLO76041 1014 aa18.75■□□□□ 0.59
VPS37C-201ENST00000301765 FUT2Q10981 343 aa18.75■□□□□ 0.59
VPS37C-201ENST00000301765 GRIK5Q16478 980 aa18.75■□□□□ 0.59
VPS37C-201ENST00000301765 TMTC1Q8IUR5 882 aa18.75■□□□□ 0.59
VPS37C-201ENST00000301765 GSDMAQ96QA5 445 aa18.75■□□□□ 0.59
VPS37C-201ENST00000301765 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.75■□□□□ 0.59
VPS37C-201ENST00000301765 EPN1Q9Y6I3 576 aaPredicted RBP18.75■□□□□ 0.59
VPS37C-201ENST00000301765 COL14A1Q05707 1796 aaKnown RBP18.74■□□□□ 0.59
VPS37C-201ENST00000301765 NKRFO15226 690 aaKnown RBP eCLIP18.74■□□□□ 0.59
VPS37C-201ENST00000301765 PRCPP42785 496 aa18.74■□□□□ 0.59
VPS37C-201ENST00000301765 TUBB2AQ13885 445 aa18.74■□□□□ 0.59
VPS37C-201ENST00000301765 E2F5Q15329 346 aa18.74■□□□□ 0.59
VPS37C-201ENST00000301765 CYP26C1Q6V0L0 522 aa18.74■□□□□ 0.59
VPS37C-201ENST00000301765 RASGRP4Q8TDF6 673 aa18.74■□□□□ 0.59
VPS37C-201ENST00000301765 TUBB2BQ9BVA1 445 aa18.74■□□□□ 0.59
VPS37C-201ENST00000301765 SKAP2O75563 359 aaPredicted RBP18.74■□□□□ 0.59
VPS37C-201ENST00000301765 CXCR5P32302 372 aa18.74■□□□□ 0.59
VPS37C-201ENST00000301765 SF3A3Q12874 501 aaKnown RBP eCLIP18.74■□□□□ 0.59
VPS37C-201ENST00000301765 TCP11X2Q5H9J9 407 aa18.74■□□□□ 0.59
VPS37C-201ENST00000301765 SMCR8Q8TEV9 937 aaPredicted RBP18.74■□□□□ 0.59
VPS37C-201ENST00000301765 CTAGE1Q96RT6 745 aa18.74■□□□□ 0.59
VPS37C-201ENST00000301765 RCCD1A6NED2 376 aa18.73■□□□□ 0.59
VPS37C-201ENST00000301765 NDUFA10O95299 355 aa18.73■□□□□ 0.59
VPS37C-201ENST00000301765 TTMPQ5BVD1 217 aa18.73■□□□□ 0.59
VPS37C-201ENST00000301765 NBPF5PQ86XG9 351 aaPredicted RBP18.73■□□□□ 0.59
VPS37C-201ENST00000301765 TSEN2Q8NCE0 465 aaKnown RBP18.73■□□□□ 0.59
VPS37C-201ENST00000301765 ELF1P32519 619 aa18.73■□□□□ 0.59
VPS37C-201ENST00000301765 FNTAP49354 379 aa18.73■□□□□ 0.59
VPS37C-201ENST00000301765 CYP27A1Q02318 531 aa18.73■□□□□ 0.59
VPS37C-201ENST00000301765 MECOMQ03112 1051 aa18.73■□□□□ 0.59
VPS37C-201ENST00000301765 IFT88Q13099 833 aa18.73■□□□□ 0.59
VPS37C-201ENST00000301765 PAK1Q13153 545 aa18.73■□□□□ 0.59
VPS37C-201ENST00000301765 KIAA1328Q86T90 577 aa18.73■□□□□ 0.59
VPS37C-201ENST00000301765 IRF2BP1Q8IU81 584 aa18.73■□□□□ 0.59
VPS37C-201ENST00000301765 RUFY1Q96T51 708 aa18.73■□□□□ 0.59
VPS37C-201ENST00000301765 BACH1O14867 736 aa18.72■□□□□ 0.59
VPS37C-201ENST00000301765 TUBBP07437 444 aa18.72■□□□□ 0.59
VPS37C-201ENST00000301765 NF2P35240 595 aa18.72■□□□□ 0.59
VPS37C-201ENST00000301765 SCLT1Q96NL6 688 aa18.72■□□□□ 0.59
VPS37C-201ENST00000301765 LRRC1Q9BTT6 524 aa18.72■□□□□ 0.59
VPS37C-201ENST00000301765 RNF26Q9BY78 433 aaPredicted RBP18.72■□□□□ 0.59
VPS37C-201ENST00000301765 LACRTQ9GZZ8 138 aa18.72■□□□□ 0.59
VPS37C-201ENST00000301765 CCDC189A1A4V9 331 aa18.72■□□□□ 0.59
VPS37C-201ENST00000301765 DNA2P51530 1060 aa18.72■□□□□ 0.59
VPS37C-201ENST00000301765 RPS8P62241 208 aaKnown RBP18.72■□□□□ 0.59
VPS37C-201ENST00000301765 HERVK_113P62684 666 aa18.72■□□□□ 0.59
VPS37C-201ENST00000301765 TUBB4BP68371 445 aa18.72■□□□□ 0.59
VPS37C-201ENST00000301765 IFIT1BQ5T764 474 aaKnown RBP18.72■□□□□ 0.59
VPS37C-201ENST00000301765 PDXDC2PQ6P474 469 aa18.72■□□□□ 0.59
VPS37C-201ENST00000301765 LIMA1Q9UHB6 759 aaKnown RBP18.72■□□□□ 0.59
VPS37C-201ENST00000301765 ANKRD36CQ5JPF3 1778 aa18.72■□□□□ 0.59
VPS37C-201ENST00000301765 PDHBP11177 359 aa18.71■□□□□ 0.59
VPS37C-201ENST00000301765 IDEP14735 1019 aa18.71■□□□□ 0.59
VPS37C-201ENST00000301765 SRBD1Q8N5C6 995 aaKnown RBP18.71■□□□□ 0.59
VPS37C-201ENST00000301765 ZSCAN10Q96SZ4 725 aaPredicted RBP18.71■□□□□ 0.59
VPS37C-201ENST00000301765 BSDC1Q9NW68 430 aaPredicted RBP18.71■□□□□ 0.59
VPS37C-201ENST00000301765 ODF2LQ9ULJ1 636 aa18.71■□□□□ 0.59
VPS37C-201ENST00000301765 RPSAP08865 295 aaKnown RBP18.71■□□□□ 0.59
VPS37C-201ENST00000301765 CAVIN4Q5BKX8 364 aa18.71■□□□□ 0.59
VPS37C-201ENST00000301765 AGPAT5Q9NUQ2 364 aa18.71■□□□□ 0.59
VPS37C-201ENST00000301765 ZNF652Q9Y2D9 606 aa18.71■□□□□ 0.59
VPS37C-201ENST00000301765 MEFVO15553 781 aaPredicted RBP18.71■□□□□ 0.59
VPS37C-201ENST00000301765 KIF1CO43896 1103 aaKnown RBP18.71■□□□□ 0.59
VPS37C-201ENST00000301765 WDR59Q6PJI9 974 aa18.71■□□□□ 0.59
VPS37C-201ENST00000301765 TNFRSF25Q93038 417 aa18.71■□□□□ 0.59
VPS37C-201ENST00000301765 SETDB2Q96T68 719 aa18.71■□□□□ 0.59
VPS37C-201ENST00000301765 PARP1P09874 1014 aaKnown RBP18.7■□□□□ 0.58
VPS37C-201ENST00000301765 NEDD9Q14511 834 aa18.7■□□□□ 0.58
VPS37C-201ENST00000301765 ESR2Q92731 530 aa18.7■□□□□ 0.58
VPS37C-201ENST00000301765 ARHGEF1Q92888 912 aaKnown RBP18.7■□□□□ 0.58
VPS37C-201ENST00000301765 ZPR1O75312 459 aa18.7■□□□□ 0.58
VPS37C-201ENST00000301765 USP17L8P0C7I0 530 aa18.7■□□□□ 0.58
VPS37C-201ENST00000301765 NFIXQ14938 502 aa18.7■□□□□ 0.58
VPS37C-201ENST00000301765 DIXDC1Q155Q3 683 aa18.7■□□□□ 0.58
VPS37C-201ENST00000301765 GPKOWQ92917 476 aaPredicted RBP eCLIP18.7■□□□□ 0.58
VPS37C-201ENST00000301765 DYNLL2Q96FJ2 89 aa18.7■□□□□ 0.58
VPS37C-201ENST00000301765 KLC4Q9NSK0 619 aa18.7■□□□□ 0.58
VPS37C-201ENST00000301765 THRAP3Q9Y2W1 955 aaKnown RBP18.7■□□□□ 0.58
VPS37C-201ENST00000301765 PNPLA7Q6ZV29 1317 aa18.7■□□□□ 0.58
VPS37C-201ENST00000301765 BAZ2AQ9UIF9 1905 aaKnown RBP18.69■□□□□ 0.58
VPS37C-201ENST00000301765 RPN1P04843 607 aaKnown RBP18.69■□□□□ 0.58
VPS37C-201ENST00000301765 XBP1P17861 261 aa18.69■□□□□ 0.58
VPS37C-201ENST00000301765 ERCC3P19447 782 aa18.69■□□□□ 0.58
VPS37C-201ENST00000301765 ATP2C1P98194 919 aaPredicted RBP18.69■□□□□ 0.58
VPS37C-201ENST00000301765 SF3B2Q13435 895 aaKnown RBP18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms